RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 E9PLD3 99 aa10.31□□□□□ -0.76
USB1-213ENST00000566292 SSBP3-AS1Q7Z2R9 100 aa10.31□□□□□ -0.76
USB1-213ENST00000566292 ZNF73O43830 326 aaPredicted RBP10.28□□□□□ -0.76
USB1-213ENST00000566292 RPS29P62273 56 aaKnown RBP10.28□□□□□ -0.76
USB1-213ENST00000566292 Q8N377 158 aa10.28□□□□□ -0.76
USB1-213ENST00000566292 SYS1-DBNDD2H3BUS1 97 aa10.26□□□□□ -0.77
USB1-213ENST00000566292 JOSD1Q15040 202 aaPredicted RBP10.26□□□□□ -0.77
USB1-213ENST00000566292 LITAFQ99732 161 aa10.26□□□□□ -0.77
USB1-213ENST00000566292 ST20-AS1Q8NBB2 130 aa10.25□□□□□ -0.77
USB1-213ENST00000566292 KRTAP9-2Q9BYQ4 174 aa10.25□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BKO60814 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BJP06899 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BOP23527 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BBP33778 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BDP58876 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BCP62807 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST2H2BEQ16778 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 ASB16-AS1Q495Z4 193 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BHQ93079 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BNQ99877 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 HIST1H2BMQ99879 126 aa10.24□□□□□ -0.77
USB1-213ENST00000566292 LINC00308Q8TCZ7 52 aa10.23□□□□□ -0.77
USB1-213ENST00000566292 C9orf153Q5TBE3 101 aa10.22□□□□□ -0.77
USB1-213ENST00000566292 LINC01545Q5VT33 79 aa10.22□□□□□ -0.77
USB1-213ENST00000566292 SLC25A20O43772 301 aa10.21□□□□□ -0.77
USB1-213ENST00000566292 SPANXCQ9NY87 97 aa10.21□□□□□ -0.77
USB1-213ENST00000566292 TIMM17BO60830 172 aa10.2□□□□□ -0.78
USB1-213ENST00000566292 KRTAP4-1Q9BYQ7 146 aa10.2□□□□□ -0.78
USB1-213ENST00000566292 C5orf52A6NGY3 159 aa10.19□□□□□ -0.78
USB1-213ENST00000566292 TTTY13Q9BZ97 58 aa10.19□□□□□ -0.78
USB1-213ENST00000566292 CBY1Q9Y3M2 126 aa10.19□□□□□ -0.78
USB1-213ENST00000566292 HINT1P49773 126 aaPredicted RBP10.18□□□□□ -0.78
USB1-213ENST00000566292 PET117Q6UWS5 81 aa10.18□□□□□ -0.78
USB1-213ENST00000566292 OR13C6PQ8NH95 151 aa10.18□□□□□ -0.78
USB1-213ENST00000566292 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
USB1-213ENST00000566292 SPRR1BP22528 89 aa10.16□□□□□ -0.78
USB1-213ENST00000566292 C3orf79P0CE67 100 aa10.15□□□□□ -0.78
USB1-213ENST00000566292 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
USB1-213ENST00000566292 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
USB1-213ENST00000566292 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
USB1-213ENST00000566292 XP32Q5T750 250 aa10.13□□□□□ -0.79
USB1-213ENST00000566292 ELOF1P60002 83 aaKnown RBP10.12□□□□□ -0.79
USB1-213ENST00000566292 COX7BP24311 80 aa10.1□□□□□ -0.79
USB1-213ENST00000566292 C6orf99Q4VX62 202 aa10.1□□□□□ -0.79
USB1-213ENST00000566292 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
USB1-213ENST00000566292 SLC25A34Q6PIV7 304 aa10.09□□□□□ -0.79
USB1-213ENST00000566292 HRCT1Q6UXD1 115 aa10.09□□□□□ -0.79
USB1-213ENST00000566292 KRTDAPP60985 99 aa10.08□□□□□ -0.8
USB1-213ENST00000566292 COA6Q5JTJ3 125 aaKnown RBP10.08□□□□□ -0.8
USB1-213ENST00000566292 LAMTOR3Q9UHA4 124 aa10.08□□□□□ -0.8
USB1-213ENST00000566292 ANKRD39Q53RE8 183 aa10.06□□□□□ -0.8
USB1-213ENST00000566292 LIMD2Q9BT23 127 aa10.06□□□□□ -0.8
USB1-213ENST00000566292 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
USB1-213ENST00000566292 LINC01547P58512 204 aaPredicted RBP10.04□□□□□ -0.8
USB1-213ENST00000566292 TAL2Q16559 108 aa10.04□□□□□ -0.8
USB1-213ENST00000566292 Q1RN00 199 aa10.04□□□□□ -0.8
USB1-213ENST00000566292 DEFB105AQ8NG35 78 aa10.04□□□□□ -0.8
USB1-213ENST00000566292 TRBV7-6A0A0J9YX20 115 aa10.03□□□□□ -0.8
USB1-213ENST00000566292 SMIM29Q86T20 159 aa10.02□□□□□ -0.81
USB1-213ENST00000566292 ATOH7Q8N100 152 aa10.02□□□□□ -0.81
USB1-213ENST00000566292 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
USB1-213ENST00000566292 IFITM1P13164 125 aa10.01□□□□□ -0.81
USB1-213ENST00000566292 A0A1B0GWB2 263 aa10□□□□□ -0.81
USB1-213ENST00000566292 C20orf202A1L168 122 aa10□□□□□ -0.81
USB1-213ENST00000566292 CD164Q04900 197 aa10□□□□□ -0.81
USB1-213ENST00000566292 PCP2Q8IVA1 136 aa10□□□□□ -0.81
USB1-213ENST00000566292 MUSTN1Q8IVN3 82 aa10□□□□□ -0.81
USB1-213ENST00000566292 COPS9Q8WXC6 57 aa10□□□□□ -0.81
USB1-213ENST00000566292 PRO1933Q9H354 126 aa9.99□□□□□ -0.81
USB1-213ENST00000566292 A6NDN8 102 aa9.98□□□□□ -0.81
USB1-213ENST00000566292 C9orf92A6NGG3 77 aa9.98□□□□□ -0.81
USB1-213ENST00000566292 Q6ZVH6 145 aa9.98□□□□□ -0.81
USB1-213ENST00000566292 IGLV5-48A0A075B6I7 105 aa9.97□□□□□ -0.81
USB1-213ENST00000566292 H7C2G1 150 aa9.96□□□□□ -0.82
USB1-213ENST00000566292 A0A0G2JQZ4 141 aa9.95□□□□□ -0.82
USB1-213ENST00000566292 PCOTHQ58A44 107 aa9.95□□□□□ -0.82
USB1-213ENST00000566292 LCE2CQ5TA81 110 aa9.95□□□□□ -0.82
USB1-213ENST00000566292 KRTAP9-6A0A140TA67 174 aa9.94□□□□□ -0.82
USB1-213ENST00000566292 AKR1D1P51857 326 aa9.94□□□□□ -0.82
USB1-213ENST00000566292 Q5XG85 94 aa9.94□□□□□ -0.82
USB1-213ENST00000566292 KRTAP19-2Q3LHN2 52 aa9.93□□□□□ -0.82
USB1-213ENST00000566292 SMIM11BQ8TCY0 68 aa9.93□□□□□ -0.82
USB1-213ENST00000566292 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
USB1-213ENST00000566292 A4D1N5 150 aa9.91□□□□□ -0.82
USB1-213ENST00000566292 C1orf195Q5TG92 126 aa9.91□□□□□ -0.82
USB1-213ENST00000566292 IGLV8-61A0A075B6I0 122 aa9.9□□□□□ -0.82
USB1-213ENST00000566292 NHP2Q9NX24 153 aaKnown RBP9.88□□□□□ -0.83
USB1-213ENST00000566292 SNRPEP62304 92 aaKnown RBP9.87□□□□□ -0.83
USB1-213ENST00000566292 LCE2DQ5TA82 110 aaPredicted RBP9.85□□□□□ -0.83
USB1-213ENST00000566292 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
USB1-213ENST00000566292 HIST1H2BLQ99880 126 aa9.83□□□□□ -0.84
USB1-213ENST00000566292 MT1HP80294 61 aa9.82□□□□□ -0.84
USB1-213ENST00000566292 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
USB1-213ENST00000566292 VAMP3Q15836 100 aa9.8□□□□□ -0.84
USB1-213ENST00000566292 F8WEM9 126 aa9.79□□□□□ -0.84
USB1-213ENST00000566292 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
USB1-213ENST00000566292 Q6ZQY7 126 aa9.79□□□□□ -0.84
USB1-213ENST00000566292 TCL1BO95988 128 aa9.78□□□□□ -0.84
USB1-213ENST00000566292 S100A2P29034 98 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms