RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SPCS1Q9Y6A9 102 aa12.07□□□□□ -0.48
CSPG4P13-201ENST00000565545 H0YGX0 51 aa12.06□□□□□ -0.48
CSPG4P13-201ENST00000565545 M0QXV9 152 aa12.06□□□□□ -0.48
CSPG4P13-201ENST00000565545 GTF2H5Q6ZYL4 71 aa12.06□□□□□ -0.48
CSPG4P13-201ENST00000565545 LINC00167Q96N53 147 aa12.06□□□□□ -0.48
CSPG4P13-201ENST00000565545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.06□□□□□ -0.48
CSPG4P13-201ENST00000565545 DNAH5Q8TE73 4624 aa12.06□□□□□ -0.48
CSPG4P13-201ENST00000565545 GAGE10A6NGK3 116 aa12.05□□□□□ -0.48
CSPG4P13-201ENST00000565545 KCNQ1DNQ9H478 68 aa12.05□□□□□ -0.48
CSPG4P13-201ENST00000565545 IGLV1-50A0A075B6I6 118 aa12.04□□□□□ -0.48
CSPG4P13-201ENST00000565545 K7EP34 96 aa12.04□□□□□ -0.48
CSPG4P13-201ENST00000565545 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
CSPG4P13-201ENST00000565545 PANO1I0J062 215 aa12.03□□□□□ -0.48
CSPG4P13-201ENST00000565545 PRYO14603 147 aa12.03□□□□□ -0.48
CSPG4P13-201ENST00000565545 ZNF73O43830 326 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P13-201ENST00000565545 INAFM2P0DMQ5 153 aa12.02□□□□□ -0.49
CSPG4P13-201ENST00000565545 C6orf99Q4VX62 202 aa12.02□□□□□ -0.49
CSPG4P13-201ENST00000565545 DIRC1Q969H9 104 aa12.02□□□□□ -0.49
CSPG4P13-201ENST00000565545 HERC1Q15751 4861 aa12□□□□□ -0.49
CSPG4P13-201ENST00000565545 A0A087WYN8 130 aa12□□□□□ -0.49
CSPG4P13-201ENST00000565545 TCL1BO95988 128 aa12□□□□□ -0.49
CSPG4P13-201ENST00000565545 ATXN8Q156A1 80 aa12□□□□□ -0.49
CSPG4P13-201ENST00000565545 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
CSPG4P13-201ENST00000565545 RPL37AP8A6NKH3 93 aa11.99□□□□□ -0.49
CSPG4P13-201ENST00000565545 UBE2V1Q13404 147 aa11.99□□□□□ -0.49
CSPG4P13-201ENST00000565545 DMBT1Q9UGM3 2413 aaPredicted RBP11.98□□□□□ -0.49
CSPG4P13-201ENST00000565545 LST1O00453 97 aa11.97□□□□□ -0.49
CSPG4P13-201ENST00000565545 PHF5AQ7RTV0 110 aaKnown RBP11.97□□□□□ -0.49
CSPG4P13-201ENST00000565545 CLEC2BQ92478 149 aa11.97□□□□□ -0.49
CSPG4P13-201ENST00000565545 A0A1B0GX51 115 aa11.96□□□□□ -0.49
CSPG4P13-201ENST00000565545 SNCGO76070 127 aa11.96□□□□□ -0.49
CSPG4P13-201ENST00000565545 SPRR1AP35321 89 aa11.96□□□□□ -0.49
CSPG4P13-201ENST00000565545 KRTAP10-1P60331 282 aa11.96□□□□□ -0.49
CSPG4P13-201ENST00000565545 TRACP01848 142 aa11.95□□□□□ -0.5
CSPG4P13-201ENST00000565545 COX7BP24311 80 aa11.95□□□□□ -0.5
CSPG4P13-201ENST00000565545 UBE2BP63146 152 aa11.95□□□□□ -0.5
CSPG4P13-201ENST00000565545 REG3GQ6UW15 175 aa11.95□□□□□ -0.5
CSPG4P13-201ENST00000565545 Q6ZSA8 131 aa11.95□□□□□ -0.5
CSPG4P13-201ENST00000565545 ELOF1P60002 83 aaKnown RBP11.94□□□□□ -0.5
CSPG4P13-201ENST00000565545 H3BMG7 143 aa11.93□□□□□ -0.5
CSPG4P13-201ENST00000565545 XGP55808 180 aa11.93□□□□□ -0.5
CSPG4P13-201ENST00000565545 Q5VSD8 79 aa11.93□□□□□ -0.5
CSPG4P13-201ENST00000565545 LINC00575Q6W349 94 aa11.92□□□□□ -0.5
CSPG4P13-201ENST00000565545 FAM218AQ96MZ4 157 aa11.92□□□□□ -0.5
CSPG4P13-201ENST00000565545 ETDCA0A1B0GVM5 59 aa11.91□□□□□ -0.5
CSPG4P13-201ENST00000565545 KRTAP4-16G5E9R7 235 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P13-201ENST00000565545 SLC25A20O43772 301 aa11.9□□□□□ -0.5
CSPG4P13-201ENST00000565545 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
CSPG4P13-201ENST00000565545 LINC00528Q8N1L1 170 aa11.89□□□□□ -0.51
CSPG4P13-201ENST00000565545 B5MCH6 92 aa11.88□□□□□ -0.51
CSPG4P13-201ENST00000565545 DNAL4O96015 105 aa11.88□□□□□ -0.51
CSPG4P13-201ENST00000565545 hADV29S1A0JD25 119 aa11.87□□□□□ -0.51
CSPG4P13-201ENST00000565545 F8W1H4 67 aa11.87□□□□□ -0.51
CSPG4P13-201ENST00000565545 SMR3BP02814 79 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P13-201ENST00000565545 Q6ZRX8 168 aa11.87□□□□□ -0.51
CSPG4P13-201ENST00000565545 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
CSPG4P13-201ENST00000565545 DNAH8Q96JB1 4490 aa11.87□□□□□ -0.51
CSPG4P13-201ENST00000565545 DHRS4-AS1Q9P1J3 65 aa11.86□□□□□ -0.51
CSPG4P13-201ENST00000565545 C9JAW5 83 aa11.85□□□□□ -0.51
CSPG4P13-201ENST00000565545 SCXQ7RTU7 201 aa11.85□□□□□ -0.51
CSPG4P13-201ENST00000565545 KRTAP11-1Q8IUC1 163 aa11.85□□□□□ -0.51
CSPG4P13-201ENST00000565545 FAT1Q14517 4588 aa11.84□□□□□ -0.51
CSPG4P13-201ENST00000565545 H0Y9J4 135 aa11.84□□□□□ -0.51
CSPG4P13-201ENST00000565545 FAM229AH3BQW9 127 aa11.84□□□□□ -0.51
CSPG4P13-201ENST00000565545 PRO0461Q9UI25 63 aa11.84□□□□□ -0.51
CSPG4P13-201ENST00000565545 BCE1O60756 84 aa11.83□□□□□ -0.52
CSPG4P13-201ENST00000565545 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
CSPG4P13-201ENST00000565545 FLG2Q5D862 2391 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P13-201ENST00000565545 H3BT86 120 aa11.82□□□□□ -0.52
CSPG4P13-201ENST00000565545 LINC01600Q96MT4 127 aa11.82□□□□□ -0.52
CSPG4P13-201ENST00000565545 H3BQ85 93 aa11.81□□□□□ -0.52
CSPG4P13-201ENST00000565545 GHRHP01286 108 aa11.81□□□□□ -0.52
CSPG4P13-201ENST00000565545 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P13-201ENST00000565545 OCIAD2Q56VL3 154 aa11.8□□□□□ -0.52
CSPG4P13-201ENST00000565545 ORMDL1Q9P0S3 153 aa11.8□□□□□ -0.52
CSPG4P13-201ENST00000565545 J3QL48 77 aa11.79□□□□□ -0.52
CSPG4P13-201ENST00000565545 HAMPP81172 84 aa11.79□□□□□ -0.52
CSPG4P13-201ENST00000565545 ANKRD29Q8N6D5 301 aa11.79□□□□□ -0.52
CSPG4P13-201ENST00000565545 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
CSPG4P13-201ENST00000565545 Q9BRP9 147 aa11.78□□□□□ -0.52
CSPG4P13-201ENST00000565545 PSORS1C2Q9UIG4 136 aa11.78□□□□□ -0.52
CSPG4P13-201ENST00000565545 UBE2AP49459 152 aa11.77□□□□□ -0.53
CSPG4P13-201ENST00000565545 MTURNQ8N3F0 131 aa11.77□□□□□ -0.53
CSPG4P13-201ENST00000565545 SMCPP49901 116 aaPredicted RBP11.76□□□□□ -0.53
CSPG4P13-201ENST00000565545 Q6ZQY7 126 aa11.76□□□□□ -0.53
CSPG4P13-201ENST00000565545 PRLHP81277 87 aa11.75□□□□□ -0.53
CSPG4P13-201ENST00000565545 TMEM256-PLSCR3K7ERE1 68 aa11.74□□□□□ -0.53
CSPG4P13-201ENST00000565545 C1orf137Q5JT78 98 aa11.74□□□□□ -0.53
CSPG4P13-201ENST00000565545 KRTAP13-1Q8IUC0 172 aa11.74□□□□□ -0.53
CSPG4P13-201ENST00000565545 SMCR5Q8TEV8 140 aa11.74□□□□□ -0.53
CSPG4P13-201ENST00000565545 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
CSPG4P13-201ENST00000565545 MYCBP2O75592 4640 aa11.74□□□□□ -0.53
CSPG4P13-201ENST00000565545 SRRM2Q9UQ35 2752 aaKnown RBP11.73□□□□□ -0.53
CSPG4P13-201ENST00000565545 PPDPFLQ8WWR9 84 aa11.72□□□□□ -0.53
CSPG4P13-201ENST00000565545 HIGD2AQ9BW72 106 aa11.71□□□□□ -0.53
CSPG4P13-201ENST00000565545 ZNF861PO60384 105 aa11.68□□□□□ -0.54
CSPG4P13-201ENST00000565545 ERC2-IT1O76042 136 aa11.68□□□□□ -0.54
CSPG4P13-201ENST00000565545 IGLV7-43P04211 117 aa11.68□□□□□ -0.54
CSPG4P13-201ENST00000565545 TEN1Q86WV5 123 aa11.68□□□□□ -0.54
CSPG4P13-201ENST00000565545 IGLV5-48A0A075B6I7 105 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms