RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HIST1H2BJP06899 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BOP23527 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BBP33778 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BDP58876 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 NPC2P61916 151 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BCP62807 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST2H2BEQ16778 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BHQ93079 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BNQ99877 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 HIST1H2BMQ99879 126 aa11.25□□□□□ -0.61
CLN6-206ENST00000565471 ZNF73O43830 326 aaPredicted RBP11.24□□□□□ -0.61
CLN6-206ENST00000565471 CBY1Q9Y3M2 126 aa11.24□□□□□ -0.61
CLN6-206ENST00000565471 LINC01545Q5VT33 79 aa11.23□□□□□ -0.61
CLN6-206ENST00000565471 TIMM17BO60830 172 aa11.22□□□□□ -0.61
CLN6-206ENST00000565471 KRTAP13-3Q3SY46 172 aa11.22□□□□□ -0.61
CLN6-206ENST00000565471 LITAFQ99732 161 aa11.22□□□□□ -0.61
CLN6-206ENST00000565471 PET117Q6UWS5 81 aa11.21□□□□□ -0.61
CLN6-206ENST00000565471 SPANXCQ9NY87 97 aa11.21□□□□□ -0.61
CLN6-206ENST00000565471 C5orf52A6NGY3 159 aa11.2□□□□□ -0.62
CLN6-206ENST00000565471 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
CLN6-206ENST00000565471 HINT1P49773 126 aaPredicted RBP11.19□□□□□ -0.62
CLN6-206ENST00000565471 LCE2AQ5TA79 106 aaPredicted RBP11.19□□□□□ -0.62
CLN6-206ENST00000565471 Q8N377 158 aa11.18□□□□□ -0.62
CLN6-206ENST00000565471 MUC17Q685J3 4493 aa11.16□□□□□ -0.62
CLN6-206ENST00000565471 ZNF815PA8K554 130 aa11.16□□□□□ -0.62
CLN6-206ENST00000565471 SLC25A20O43772 301 aa11.15□□□□□ -0.62
CLN6-206ENST00000565471 C9orf153Q5TBE3 101 aa11.15□□□□□ -0.62
CLN6-206ENST00000565471 ST20-AS1Q8NBB2 130 aa11.15□□□□□ -0.62
CLN6-206ENST00000565471 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
CLN6-206ENST00000565471 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
CLN6-206ENST00000565471 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
CLN6-206ENST00000565471 ASB16-AS1Q495Z4 193 aa11.13□□□□□ -0.63
CLN6-206ENST00000565471 SPRR1BP22528 89 aa11.12□□□□□ -0.63
CLN6-206ENST00000565471 COA6Q5JTJ3 125 aaKnown RBP11.12□□□□□ -0.63
CLN6-206ENST00000565471 DHRS4-AS1Q9P1J3 65 aa11.12□□□□□ -0.63
CLN6-206ENST00000565471 LINC00518Q8N0U6 118 aa11.11□□□□□ -0.63
CLN6-206ENST00000565471 TTTY13Q9BZ97 58 aa11.11□□□□□ -0.63
CLN6-206ENST00000565471 FAT4Q6V0I7 4981 aa11.09□□□□□ -0.63
CLN6-206ENST00000565471 SLC25A34Q6PIV7 304 aa11.09□□□□□ -0.63
CLN6-206ENST00000565471 ELOF1P60002 83 aaKnown RBP11.07□□□□□ -0.64
CLN6-206ENST00000565471 SEC61BP60468 96 aaKnown RBP11.07□□□□□ -0.64
CLN6-206ENST00000565471 KRTDAPP60985 99 aa11.07□□□□□ -0.64
CLN6-206ENST00000565471 COX7BP24311 80 aa11.06□□□□□ -0.64
CLN6-206ENST00000565471 C20orf202A1L168 122 aa11.05□□□□□ -0.64
CLN6-206ENST00000565471 C6orf99Q4VX62 202 aa11.05□□□□□ -0.64
CLN6-206ENST00000565471 SCGB1D4Q6XE38 83 aa11.04□□□□□ -0.64
CLN6-206ENST00000565471 COPS9Q8WXC6 57 aa11.04□□□□□ -0.64
CLN6-206ENST00000565471 LAMTOR3Q9UHA4 124 aa11.04□□□□□ -0.64
CLN6-206ENST00000565471 TRBV7-6A0A0J9YX20 115 aa11.02□□□□□ -0.65
CLN6-206ENST00000565471 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
CLN6-206ENST00000565471 LIMD2Q9BT23 127 aa11.02□□□□□ -0.65
CLN6-206ENST00000565471 IFITM1P13164 125 aa11.01□□□□□ -0.65
CLN6-206ENST00000565471 XP32Q5T750 250 aa11.01□□□□□ -0.65
CLN6-206ENST00000565471 Q6ZVH6 145 aa11□□□□□ -0.65
CLN6-206ENST00000565471 KRTAP9-2Q9BYQ4 174 aa11□□□□□ -0.65
CLN6-206ENST00000565471 AKR1D1P51857 326 aa10.99□□□□□ -0.65
CLN6-206ENST00000565471 TAL2Q16559 108 aa10.98□□□□□ -0.65
CLN6-206ENST00000565471 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
CLN6-206ENST00000565471 A0A1B0GWB2 263 aa10.97□□□□□ -0.65
CLN6-206ENST00000565471 KRTAP4-1Q9BYQ7 146 aa10.97□□□□□ -0.65
CLN6-206ENST00000565471 CD164Q04900 197 aa10.96□□□□□ -0.65
CLN6-206ENST00000565471 HRCT1Q6UXD1 115 aa10.96□□□□□ -0.65
CLN6-206ENST00000565471 ATOH7Q8N100 152 aa10.96□□□□□ -0.65
CLN6-206ENST00000565471 Q1RN00 199 aa10.95□□□□□ -0.66
CLN6-206ENST00000565471 DEFB105AQ8NG35 78 aa10.95□□□□□ -0.66
CLN6-206ENST00000565471 A6NDN8 102 aa10.94□□□□□ -0.66
CLN6-206ENST00000565471 PCP2Q8IVA1 136 aa10.94□□□□□ -0.66
CLN6-206ENST00000565471 MUSTN1Q8IVN3 82 aa10.94□□□□□ -0.66
CLN6-206ENST00000565471 PRO1933Q9H354 126 aa10.94□□□□□ -0.66
CLN6-206ENST00000565471 IGLV5-48A0A075B6I7 105 aa10.92□□□□□ -0.66
CLN6-206ENST00000565471 A4D1N5 150 aa10.92□□□□□ -0.66
CLN6-206ENST00000565471 SNRPEP62304 92 aaKnown RBP10.92□□□□□ -0.66
CLN6-206ENST00000565471 SMIM29Q86T20 159 aa10.91□□□□□ -0.66
CLN6-206ENST00000565471 LINC01547P58512 204 aaPredicted RBP10.9□□□□□ -0.66
CLN6-206ENST00000565471 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
CLN6-206ENST00000565471 H7C2G1 150 aa10.88□□□□□ -0.67
CLN6-206ENST00000565471 Q5XG85 94 aa10.88□□□□□ -0.67
CLN6-206ENST00000565471 NHP2Q9NX24 153 aaKnown RBP10.88□□□□□ -0.67
CLN6-206ENST00000565471 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
CLN6-206ENST00000565471 C9orf92A6NGG3 77 aa10.82□□□□□ -0.68
CLN6-206ENST00000565471 HIST3H2BBQ8N257 126 aa10.82□□□□□ -0.68
CLN6-206ENST00000565471 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
CLN6-206ENST00000565471 S100A2P29034 98 aa10.8□□□□□ -0.68
CLN6-206ENST00000565471 HSBP1L1C9JCN9 74 aa10.79□□□□□ -0.68
CLN6-206ENST00000565471 VAMP3Q15836 100 aa10.79□□□□□ -0.68
CLN6-206ENST00000565471 PCOTHQ58A44 107 aa10.79□□□□□ -0.68
CLN6-206ENST00000565471 C1orf195Q5TG92 126 aa10.79□□□□□ -0.68
CLN6-206ENST00000565471 A0A0G2JQZ4 141 aa10.78□□□□□ -0.68
CLN6-206ENST00000565471 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
CLN6-206ENST00000565471 IGLV8-61A0A075B6I0 122 aa10.74□□□□□ -0.69
CLN6-206ENST00000565471 F8WEM9 126 aa10.74□□□□□ -0.69
CLN6-206ENST00000565471 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
CLN6-206ENST00000565471 TCL1BO95988 128 aa10.73□□□□□ -0.69
CLN6-206ENST00000565471 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
CLN6-206ENST00000565471 KRTAP19-2Q3LHN2 52 aa10.71□□□□□ -0.69
CLN6-206ENST00000565471 Q6ZQY7 126 aa10.71□□□□□ -0.69
CLN6-206ENST00000565471 S100A6P06703 90 aa10.7□□□□□ -0.7
CLN6-206ENST00000565471 Q6JHZ5 121 aa10.69□□□□□ -0.7
CLN6-206ENST00000565471 S100A1P23297 94 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 255.7 ms