RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 BATFQ16520 125 aa3.67□□□□□ -1.82
TCF4-228ENST00000565393 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
TCF4-228ENST00000565393 COL5A1-AS1Q5SY13 56 aa3.67□□□□□ -1.82
TCF4-228ENST00000565393 LOC107984156A0A0G2JMH3 177 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 TRBV10-2A0A0K0K1G8 114 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 KRTAP4-16G5E9R7 235 aaPredicted RBP3.66□□□□□ -1.82
TCF4-228ENST00000565393 ERC2-IT1O76042 136 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 SPINK1P00995 79 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 NMUP48645 174 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 HINT1P49773 126 aaPredicted RBP3.66□□□□□ -1.82
TCF4-228ENST00000565393 JOSD1Q15040 202 aaPredicted RBP3.66□□□□□ -1.82
TCF4-228ENST00000565393 SSBP3-AS1Q7Z2R9 100 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 ARL17AQ8IVW1 177 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 HIST3H2BBQ8N257 126 aa3.66□□□□□ -1.82
TCF4-228ENST00000565393 TNXBP22105 4242 aa3.65□□□□□ -1.82
TCF4-228ENST00000565393 LINC00310P59036 64 aa3.65□□□□□ -1.83
TCF4-228ENST00000565393 MOBPQ13875 183 aa3.65□□□□□ -1.83
TCF4-228ENST00000565393 ADAMTSL4-AS1Q5T5F5 129 aa3.65□□□□□ -1.83
TCF4-228ENST00000565393 OR13C6PQ8NH95 151 aa3.65□□□□□ -1.83
TCF4-228ENST00000565393 SPANXB1Q9NS25 103 aaPredicted RBP3.65□□□□□ -1.83
TCF4-228ENST00000565393 TRAV23DV6A0A075B6W5 121 aa3.64□□□□□ -1.83
TCF4-228ENST00000565393 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
TCF4-228ENST00000565393 A0A1B0GV72 72 aa3.64□□□□□ -1.83
TCF4-228ENST00000565393 NDUFC2O95298 119 aa3.64□□□□□ -1.83
TCF4-228ENST00000565393 IGLV6-57P01721 117 aa3.64□□□□□ -1.83
TCF4-228ENST00000565393 LINC00483Q53H64 154 aa3.64□□□□□ -1.83
TCF4-228ENST00000565393 FP248Q71RG6 208 aaPredicted RBP3.64□□□□□ -1.83
TCF4-228ENST00000565393 E9PLD3 99 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 SYS1-DBNDD2H3BUS1 97 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 ZNF73O43830 326 aaPredicted RBP3.63□□□□□ -1.83
TCF4-228ENST00000565393 SCGB1D1O95968 90 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 UBE2V1Q13404 147 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 Q6ZRX8 168 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 Q9BRP9 147 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 KRTAP9-2Q9BYQ4 174 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 LRP2P98164 4655 aa3.63□□□□□ -1.83
TCF4-228ENST00000565393 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 K7ERU9 68 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 SLC25A20O43772 301 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 EIF4EBP3O60516 100 aaPredicted RBP3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BKO60814 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BJP06899 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BOP23527 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BBP33778 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BDP58876 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BCP62807 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST2H2BEQ16778 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.62□□□□□ -1.83
TCF4-228ENST00000565393 SOSTDC1Q6X4U4 206 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 ST20-AS1Q8NBB2 130 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BHQ93079 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BNQ99877 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BMQ99879 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 HIST1H2BLQ99880 126 aa3.62□□□□□ -1.83
TCF4-228ENST00000565393 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
TCF4-228ENST00000565393 OCIAD2Q56VL3 154 aa3.61□□□□□ -1.83
TCF4-228ENST00000565393 HRCT1Q6UXD1 115 aa3.61□□□□□ -1.83
TCF4-228ENST00000565393 Q8N377 158 aa3.61□□□□□ -1.83
TCF4-228ENST00000565393 LINC00308Q8TCZ7 52 aa3.61□□□□□ -1.83
TCF4-228ENST00000565393 LPAP08519 4548 aa3.61□□□□□ -1.83
TCF4-228ENST00000565393 ZNF815PA8K554 130 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 SCGB1A1P11684 91 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 SEC61BP60468 96 aaKnown RBP3.6□□□□□ -1.83
TCF4-228ENST00000565393 VAMP3Q15836 100 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 TAL2Q16559 108 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 SLC25A34Q6PIV7 304 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 PET117Q6UWS5 81 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 DEFB105AQ8NG35 78 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 SPANXCQ9NY87 97 aa3.6□□□□□ -1.83
TCF4-228ENST00000565393 TIMM17BO60830 172 aa3.59□□□□□ -1.83
TCF4-228ENST00000565393 COX7BP24311 80 aa3.59□□□□□ -1.83
TCF4-228ENST00000565393 KRTDAPP60985 99 aa3.59□□□□□ -1.83
TCF4-228ENST00000565393 RPS29P62273 56 aaKnown RBP3.59□□□□□ -1.83
TCF4-228ENST00000565393 ASB16-AS1Q495Z4 193 aa3.59□□□□□ -1.83
TCF4-228ENST00000565393 DHRS4-AS1Q9P1J3 65 aa3.59□□□□□ -1.83
TCF4-228ENST00000565393 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
TCF4-228ENST00000565393 A6NDN8 102 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 C3orf79P0CE67 100 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 LINC01547P58512 204 aaPredicted RBP3.58□□□□□ -1.84
TCF4-228ENST00000565393 LCE2AQ5TA79 106 aaPredicted RBP3.58□□□□□ -1.84
TCF4-228ENST00000565393 LINC01545Q5VT33 79 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 LITAFQ99732 161 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 SPANXDQ9BXN6 97 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 TTTY13Q9BZ97 58 aa3.58□□□□□ -1.84
TCF4-228ENST00000565393 C6orf99Q4VX62 202 aa3.57□□□□□ -1.84
TCF4-228ENST00000565393 MTURNQ8N3F0 131 aa3.57□□□□□ -1.84
TCF4-228ENST00000565393 VAMP8Q9BV40 100 aa3.57□□□□□ -1.84
TCF4-228ENST00000565393 SPRR1BP22528 89 aa3.56□□□□□ -1.84
TCF4-228ENST00000565393 Q1RN00 199 aa3.56□□□□□ -1.84
TCF4-228ENST00000565393 ATOH7Q8N100 152 aa3.56□□□□□ -1.84
TCF4-228ENST00000565393 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
TCF4-228ENST00000565393 LIMD2Q9BT23 127 aa3.56□□□□□ -1.84
TCF4-228ENST00000565393 UQCR10Q9UDW1 63 aa3.56□□□□□ -1.84
TCF4-228ENST00000565393 TEX49A0A1B0GTD5 131 aa3.55□□□□□ -1.84
TCF4-228ENST00000565393 H7C2G1 150 aa3.55□□□□□ -1.84
TCF4-228ENST00000565393 ELOF1P60002 83 aaKnown RBP3.55□□□□□ -1.84
TCF4-228ENST00000565393 MUSTN1Q8IVN3 82 aa3.55□□□□□ -1.84
TCF4-228ENST00000565393 SIGMAR1Q99720 223 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms