RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LINC00337Q8N6G1 96 aa4.85□□□□□ -1.63
CAPN3-213ENST00000565173 DAND5Q8N907 189 aa4.85□□□□□ -1.63
CAPN3-213ENST00000565173 PRYO14603 147 aa4.84□□□□□ -1.63
CAPN3-213ENST00000565173 BOD1L2Q8IYS8 172 aa4.84□□□□□ -1.63
CAPN3-213ENST00000565173 Q8NBF4 154 aa4.84□□□□□ -1.63
CAPN3-213ENST00000565173 SMCR5Q8TEV8 140 aa4.84□□□□□ -1.63
CAPN3-213ENST00000565173 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
CAPN3-213ENST00000565173 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 NPC2P61916 151 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 ASB16-AS1Q495Z4 193 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 SCGB1D4Q6XE38 83 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 PCP2Q8IVA1 136 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 MIEN1Q9BRT3 115 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
CAPN3-213ENST00000565173 TRBV10-3A0A0K0K1G6 114 aa4.82□□□□□ -1.64
CAPN3-213ENST00000565173 NCR3O14931 201 aa4.82□□□□□ -1.64
CAPN3-213ENST00000565173 TIMM17BO60830 172 aa4.82□□□□□ -1.64
CAPN3-213ENST00000565173 SPINK1P00995 79 aa4.82□□□□□ -1.64
CAPN3-213ENST00000565173 JOSD1Q15040 202 aaPredicted RBP4.82□□□□□ -1.64
CAPN3-213ENST00000565173 C4orf48Q5BLP8 95 aa4.82□□□□□ -1.64
CAPN3-213ENST00000565173 ADAMTSL4-AS1Q5T5F5 129 aa4.82□□□□□ -1.64
CAPN3-213ENST00000565173 LOC107984156A0A0G2JMH3 177 aa4.81□□□□□ -1.64
CAPN3-213ENST00000565173 B5MCH6 92 aa4.81□□□□□ -1.64
CAPN3-213ENST00000565173 ERC2-IT1O76042 136 aa4.81□□□□□ -1.64
CAPN3-213ENST00000565173 ARL17AQ8IVW1 177 aa4.81□□□□□ -1.64
CAPN3-213ENST00000565173 LITAFQ99732 161 aa4.81□□□□□ -1.64
CAPN3-213ENST00000565173 ETDCA0A1B0GVM5 59 aa4.8□□□□□ -1.64
CAPN3-213ENST00000565173 SOSTDC1Q6X4U4 206 aa4.8□□□□□ -1.64
CAPN3-213ENST00000565173 Q8N377 158 aa4.8□□□□□ -1.64
CAPN3-213ENST00000565173 LINC00308Q8TCZ7 52 aa4.8□□□□□ -1.64
CAPN3-213ENST00000565173 VAMP8Q9BV40 100 aa4.8□□□□□ -1.64
CAPN3-213ENST00000565173 PAM16Q9Y3D7 125 aa4.8□□□□□ -1.64
CAPN3-213ENST00000565173 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
CAPN3-213ENST00000565173 SPATA45Q537H7 98 aa4.79□□□□□ -1.64
CAPN3-213ENST00000565173 PYY3Q5JQD4 70 aa4.79□□□□□ -1.64
CAPN3-213ENST00000565173 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
CAPN3-213ENST00000565173 SSBP3-AS1Q7Z2R9 100 aa4.79□□□□□ -1.64
CAPN3-213ENST00000565173 Q9BRP9 147 aa4.79□□□□□ -1.64
CAPN3-213ENST00000565173 TRBV10-2A0A0K0K1G8 114 aa4.78□□□□□ -1.64
CAPN3-213ENST00000565173 COX8AP10176 69 aa4.78□□□□□ -1.64
CAPN3-213ENST00000565173 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
CAPN3-213ENST00000565173 MOBPQ13875 183 aa4.78□□□□□ -1.64
CAPN3-213ENST00000565173 C14orf144Q96I85 54 aa4.78□□□□□ -1.64
CAPN3-213ENST00000565173 SPANXDQ9BXN6 97 aa4.78□□□□□ -1.64
CAPN3-213ENST00000565173 SPANXB1Q9NS25 103 aaPredicted RBP4.78□□□□□ -1.64
CAPN3-213ENST00000565173 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
CAPN3-213ENST00000565173 IGLV9-49A0A0B4J1Y8 123 aa4.77□□□□□ -1.65
CAPN3-213ENST00000565173 NDUFC2O95298 119 aa4.77□□□□□ -1.65
CAPN3-213ENST00000565173 DDTP30046 118 aa4.77□□□□□ -1.65
CAPN3-213ENST00000565173 Q6ZRX8 168 aa4.77□□□□□ -1.65
CAPN3-213ENST00000565173 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
CAPN3-213ENST00000565173 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
CAPN3-213ENST00000565173 IFITM1P13164 125 aa4.76□□□□□ -1.65
CAPN3-213ENST00000565173 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
CAPN3-213ENST00000565173 S100A12P80511 92 aa4.76□□□□□ -1.65
CAPN3-213ENST00000565173 S100A7L2Q5SY68 101 aa4.76□□□□□ -1.65
CAPN3-213ENST00000565173 Q6ZVH6 145 aa4.76□□□□□ -1.65
CAPN3-213ENST00000565173 MUSTN1Q8IVN3 82 aa4.76□□□□□ -1.65
CAPN3-213ENST00000565173 DLEU1O43261 78 aa4.75□□□□□ -1.65
CAPN3-213ENST00000565173 SLC25A20O43772 301 aa4.75□□□□□ -1.65
CAPN3-213ENST00000565173 XP32Q5T750 250 aa4.75□□□□□ -1.65
CAPN3-213ENST00000565173 SLC25A34Q6PIV7 304 aa4.75□□□□□ -1.65
CAPN3-213ENST00000565173 OR13C6PQ8NH95 151 aa4.75□□□□□ -1.65
CAPN3-213ENST00000565173 LINC01547P58512 204 aaPredicted RBP4.74□□□□□ -1.65
CAPN3-213ENST00000565173 LCE2CQ5TA81 110 aa4.74□□□□□ -1.65
CAPN3-213ENST00000565173 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
CAPN3-213ENST00000565173 LINC00518Q8N0U6 118 aa4.74□□□□□ -1.65
CAPN3-213ENST00000565173 HIST1H4GQ99525 98 aa4.74□□□□□ -1.65
CAPN3-213ENST00000565173 TRAV23DV6A0A075B6W5 121 aa4.72□□□□□ -1.65
CAPN3-213ENST00000565173 A6NDN8 102 aa4.72□□□□□ -1.65
CAPN3-213ENST00000565173 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
CAPN3-213ENST00000565173 ST20-AS1Q8NBB2 130 aa4.72□□□□□ -1.65
CAPN3-213ENST00000565173 A4D1N5 150 aa4.71□□□□□ -1.66
CAPN3-213ENST00000565173 ZNF73O43830 326 aaPredicted RBP4.71□□□□□ -1.66
CAPN3-213ENST00000565173 C2orf91Q6ZV80 131 aa4.71□□□□□ -1.66
CAPN3-213ENST00000565173 HIGD1BQ9P298 99 aa4.71□□□□□ -1.66
CAPN3-213ENST00000565173 CBY1Q9Y3M2 126 aa4.71□□□□□ -1.66
CAPN3-213ENST00000565173 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
CAPN3-213ENST00000565173 TRAV13-2A0A0B4J235 113 aa4.7□□□□□ -1.66
CAPN3-213ENST00000565173 C9orf153Q5TBE3 101 aa4.7□□□□□ -1.66
CAPN3-213ENST00000565173 SMIM6P0DI80 62 aa4.69□□□□□ -1.66
CAPN3-213ENST00000565173 SPRR1BP22528 89 aa4.69□□□□□ -1.66
CAPN3-213ENST00000565173 HINT1P49773 126 aaPredicted RBP4.69□□□□□ -1.66
CAPN3-213ENST00000565173 C12orf57Q99622 126 aa4.69□□□□□ -1.66
CAPN3-213ENST00000565173 UQCR10Q9UDW1 63 aa4.69□□□□□ -1.66
CAPN3-213ENST00000565173 LOC105371267A0A1B0GV96 52 aa4.68□□□□□ -1.66
CAPN3-213ENST00000565173 TAL2Q16559 108 aa4.68□□□□□ -1.66
CAPN3-213ENST00000565173 C6orf99Q4VX62 202 aa4.68□□□□□ -1.66
CAPN3-213ENST00000565173 PRO1933Q9H354 126 aa4.68□□□□□ -1.66
CAPN3-213ENST00000565173 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
CAPN3-213ENST00000565173 COX7BP24311 80 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 MT1HP80294 61 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 HSD52Q0P140 79 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 HRCT1Q6UXD1 115 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 CEND1Q8N111 149 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 SMIM11BQ8TCY0 68 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 RAB37Q96AX2 223 aa4.66□□□□□ -1.66
CAPN3-213ENST00000565173 TMEM238LA0A1B0GVL6 79 aa4.65□□□□□ -1.67
CAPN3-213ENST00000565173 A6NJY4 79 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms