RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 HIGD1BQ9P298 99 aa10.09□□□□□ -0.79
RNF40-206ENST00000564260 TRAV23DV6A0A075B6W5 121 aa10.08□□□□□ -0.8
RNF40-206ENST00000564260 ETDCA0A1B0GVM5 59 aa10.08□□□□□ -0.8
RNF40-206ENST00000564260 MUSTN1Q8IVN3 82 aa10.08□□□□□ -0.8
RNF40-206ENST00000564260 SLC25A34Q6PIV7 304 aa10.07□□□□□ -0.8
RNF40-206ENST00000564260 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
RNF40-206ENST00000564260 HINT1P49773 126 aaPredicted RBP10.06□□□□□ -0.8
RNF40-206ENST00000564260 ZNF73O43830 326 aaPredicted RBP10.05□□□□□ -0.8
RNF40-206ENST00000564260 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
RNF40-206ENST00000564260 KRTAP1-4P0C5Y4 121 aa10.04□□□□□ -0.8
RNF40-206ENST00000564260 PRLHP81277 87 aa10.04□□□□□ -0.8
RNF40-206ENST00000564260 OR13C6PQ8NH95 151 aa10.04□□□□□ -0.8
RNF40-206ENST00000564260 MT1HL1P0DM35 61 aa10.03□□□□□ -0.8
RNF40-206ENST00000564260 Q6ZRX8 168 aa10.03□□□□□ -0.8
RNF40-206ENST00000564260 C14orf144Q96I85 54 aa10.03□□□□□ -0.8
RNF40-206ENST00000564260 HIST1H4GQ99525 98 aa10.03□□□□□ -0.8
RNF40-206ENST00000564260 ZNF706Q9Y5V0 76 aaPredicted RBP10.03□□□□□ -0.8
RNF40-206ENST00000564260 TRBV7-6A0A0J9YX20 115 aa10.02□□□□□ -0.81
RNF40-206ENST00000564260 B5MCH6 92 aa10.02□□□□□ -0.81
RNF40-206ENST00000564260 KRTAP10-8P60410 259 aa10.02□□□□□ -0.81
RNF40-206ENST00000564260 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.81
RNF40-206ENST00000564260 TAL2Q16559 108 aa10.01□□□□□ -0.81
RNF40-206ENST00000564260 HIGD2AQ9BW72 106 aa10□□□□□ -0.81
RNF40-206ENST00000564260 A4D1N5 150 aa9.98□□□□□ -0.81
RNF40-206ENST00000564260 A6NDN8 102 aa9.98□□□□□ -0.81
RNF40-206ENST00000564260 TNXBP22105 4242 aa9.97□□□□□ -0.81
RNF40-206ENST00000564260 CRYGAP11844 174 aa9.97□□□□□ -0.81
RNF40-206ENST00000564260 C2orf91Q6ZV80 131 aa9.97□□□□□ -0.81
RNF40-206ENST00000564260 SMIM6P0DI80 62 aa9.96□□□□□ -0.82
RNF40-206ENST00000564260 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.82
RNF40-206ENST00000564260 DHRS4-AS1Q9P1J3 65 aa9.96□□□□□ -0.82
RNF40-206ENST00000564260 TMEM238LA0A1B0GVL6 79 aa9.95□□□□□ -0.82
RNF40-206ENST00000564260 A0A1B0GWB2 263 aa9.95□□□□□ -0.82
RNF40-206ENST00000564260 A6NJY4 79 aa9.95□□□□□ -0.82
RNF40-206ENST00000564260 ELOF1P60002 83 aaKnown RBP9.95□□□□□ -0.82
RNF40-206ENST00000564260 UQCR10Q9UDW1 63 aa9.95□□□□□ -0.82
RNF40-206ENST00000564260 C6orf99Q4VX62 202 aa9.94□□□□□ -0.82
RNF40-206ENST00000564260 SPRR4Q96PI1 79 aa9.94□□□□□ -0.82
RNF40-206ENST00000564260 PRR26Q8N8Z3 221 aa9.93□□□□□ -0.82
RNF40-206ENST00000564260 Q9BRP9 147 aa9.93□□□□□ -0.82
RNF40-206ENST00000564260 HERC1Q15751 4861 aa9.93□□□□□ -0.82
RNF40-206ENST00000564260 COX7BP24311 80 aa9.92□□□□□ -0.82
RNF40-206ENST00000564260 LINC00483Q53H64 154 aa9.92□□□□□ -0.82
RNF40-206ENST00000564260 A0A0B4J2C4 111 aa9.91□□□□□ -0.82
RNF40-206ENST00000564260 CTAG1AP78358 180 aa9.91□□□□□ -0.82
RNF40-206ENST00000564260 VAMP3Q15836 100 aa9.91□□□□□ -0.82
RNF40-206ENST00000564260 CEND1Q8N111 149 aa9.91□□□□□ -0.82
RNF40-206ENST00000564260 HSD52Q0P140 79 aa9.9□□□□□ -0.82
RNF40-206ENST00000564260 NHP2Q9NX24 153 aaKnown RBP9.9□□□□□ -0.82
RNF40-206ENST00000564260 A0A087X002 238 aa9.89□□□□□ -0.83
RNF40-206ENST00000564260 SMIM11BQ8TCY0 68 aa9.89□□□□□ -0.83
RNF40-206ENST00000564260 CFC1BP0CG36 223 aa9.87□□□□□ -0.83
RNF40-206ENST00000564260 CFC1P0CG37 223 aa9.87□□□□□ -0.83
RNF40-206ENST00000564260 BVES-AS1Q5T3Y7 98 aa9.87□□□□□ -0.83
RNF40-206ENST00000564260 TYMSOSQ8TAI1 123 aa9.87□□□□□ -0.83
RNF40-206ENST00000564260 RAB37Q96AX2 223 aa9.87□□□□□ -0.83
RNF40-206ENST00000564260 ERC2-IT1O76042 136 aa9.86□□□□□ -0.83
RNF40-206ENST00000564260 SLC25A20O43772 301 aa9.84□□□□□ -0.83
RNF40-206ENST00000564260 SPRR1BP22528 89 aa9.84□□□□□ -0.83
RNF40-206ENST00000564260 KRTAP13-2Q52LG2 175 aa9.83□□□□□ -0.84
RNF40-206ENST00000564260 C12orf57Q99622 126 aa9.83□□□□□ -0.84
RNF40-206ENST00000564260 ANAPC11Q9NYG5 84 aa9.83□□□□□ -0.84
RNF40-206ENST00000564260 LOC105371267A0A1B0GV96 52 aa9.82□□□□□ -0.84
RNF40-206ENST00000564260 GAGE2AQ6NT46 116 aa9.82□□□□□ -0.84
RNF40-206ENST00000564260 PRO1854Q9UHT4 67 aa9.82□□□□□ -0.84
RNF40-206ENST00000564260 FXYD2P54710 66 aa9.81□□□□□ -0.84
RNF40-206ENST00000564260 SPAG11AQ6PDA7 123 aa9.8□□□□□ -0.84
RNF40-206ENST00000564260 SNCGO76070 127 aa9.79□□□□□ -0.84
RNF40-206ENST00000564260 LINC00575Q6W349 94 aa9.79□□□□□ -0.84
RNF40-206ENST00000564260 SSBP3-AS1Q7Z2R9 100 aa9.79□□□□□ -0.84
RNF40-206ENST00000564260 IGLV5-48A0A075B6I7 105 aa9.78□□□□□ -0.84
RNF40-206ENST00000564260 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
RNF40-206ENST00000564260 H0YGX0 51 aa9.78□□□□□ -0.84
RNF40-206ENST00000564260 TSTD3H0UI37 97 aa9.77□□□□□ -0.85
RNF40-206ENST00000564260 LINC00304Q8N9R0 145 aa9.77□□□□□ -0.85
RNF40-206ENST00000564260 hADV29S1A0JD25 119 aa9.76□□□□□ -0.85
RNF40-206ENST00000564260 ST20-AS1Q8NBB2 130 aa9.76□□□□□ -0.85
RNF40-206ENST00000564260 LAMTOR3Q9UHA4 124 aa9.76□□□□□ -0.85
RNF40-206ENST00000564260 M0R143 59 aa9.75□□□□□ -0.85
RNF40-206ENST00000564260 Q1RN00 199 aa9.75□□□□□ -0.85
RNF40-206ENST00000564260 C3orf22Q8N5N4 141 aa9.75□□□□□ -0.85
RNF40-206ENST00000564260 A0A1B0GX51 115 aa9.74□□□□□ -0.85
RNF40-206ENST00000564260 PPDPFLQ8WWR9 84 aa9.74□□□□□ -0.85
RNF40-206ENST00000564260 H7C2G1 150 aa9.73□□□□□ -0.85
RNF40-206ENST00000564260 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
RNF40-206ENST00000564260 Q8NBF4 154 aa9.73□□□□□ -0.85
RNF40-206ENST00000564260 PRO1933Q9H354 126 aa9.73□□□□□ -0.85
RNF40-206ENST00000564260 GHRHP01286 108 aa9.72□□□□□ -0.85
RNF40-206ENST00000564260 OCIAD2Q56VL3 154 aa9.72□□□□□ -0.85
RNF40-206ENST00000564260 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
RNF40-206ENST00000564260 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
RNF40-206ENST00000564260 HMCN2Q8NDA2 5059 aa9.7□□□□□ -0.86
RNF40-206ENST00000564260 IGLV9-49A0A0B4J1Y8 123 aa9.7□□□□□ -0.86
RNF40-206ENST00000564260 SPINK1P00995 79 aa9.7□□□□□ -0.86
RNF40-206ENST00000564260 COX6CP09669 75 aa9.7□□□□□ -0.86
RNF40-206ENST00000564260 LINC01547P58512 204 aaPredicted RBP9.7□□□□□ -0.86
RNF40-206ENST00000564260 MOBPQ13875 183 aa9.7□□□□□ -0.86
RNF40-206ENST00000564260 C9orf153Q5TBE3 101 aa9.68□□□□□ -0.86
RNF40-206ENST00000564260 Q6ZQY7 126 aa9.68□□□□□ -0.86
RNF40-206ENST00000564260 DEFB105AQ8NG35 78 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms