RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 REV3LO60673 3130 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 CEP295Q9C0D2 2601 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 POLQO75417 2590 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 DCHS1Q96JQ0 3298 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 LRRK2Q5S007 2527 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 SPAG17Q6Q759 2223 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 ASCC3Q8N3C0 2202 aaKnown RBP0.87□□□□□ -2.27
CHD9-209ENST00000564255 CFAP54Q96N23 3096 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 DOCK10Q96BY6 2186 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 DNHD1Q96M86 4753 aa0.87□□□□□ -2.27
CHD9-209ENST00000564255 FXYD6-FXYD2A0A087WZ82 144 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 PLAC8Q9NZF1 115 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 NBASA2RRP1 2371 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
CHD9-209ENST00000564255 ITPR3Q14573 2671 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 PRUNE2Q8WUY3 3088 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 MUC3AQ02505 3323 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 TEX15Q9BXT5 2789 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 MYO7AQ13402 2215 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 DIDO1Q9BTC0 2240 aaKnown RBP0.86□□□□□ -2.27
CHD9-209ENST00000564255 CFAP47Q6ZTR5 3102 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 A0A087WVE0 104 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 A0A0D9SFI3 127 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 H3BVH4 76 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 UQCR11O14957 56 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 FXYD3Q14802 87 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 LINC00846Q9NV44 126 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 TLN1Q9Y490 2541 aaKnown RBP0.86□□□□□ -2.27
CHD9-209ENST00000564255 MYO7BQ6PIF6 2116 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 USP9YO00507 2555 aaPredicted RBP0.86□□□□□ -2.27
CHD9-209ENST00000564255 SNRPGP15A8MWD9 76 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 M0R135 149 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 M0R3E3 92 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 BAGE3Q86Y29 109 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 BAGE2Q86Y30 109 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 FDCSPQ8NFU4 85 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 SPRR4Q96PI1 79 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 WFDC6Q9BQY6 131 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 V9GYV3 84 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 TENM4Q6N022 2769 aa0.86□□□□□ -2.27
CHD9-209ENST00000564255 CHD9Q3L8U1 2897 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 BSNQ9UPA5 3926 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 MGPP08493 103 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 LYNX1P0DP58 116 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 HMGA1P17096 107 aaKnown RBP0.85□□□□□ -2.27
CHD9-209ENST00000564255 ZNF137PP52743 207 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 ATXN8Q156A1 80 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 LINC00322Q6ZN03 302 aaPredicted RBP0.85□□□□□ -2.27
CHD9-209ENST00000564255 GNG13Q9P2W3 67 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 PIEZO2Q9H5I5 2752 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 VCANP13611 3396 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 ARL14EPLP0DKL9 152 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 C5orf56Q8N8D9 126 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 FAM103A1Q9BTL3 118 aaKnown RBP0.85□□□□□ -2.27
CHD9-209ENST00000564255 FXYD6Q9H0Q3 95 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 CSPG4Q6UVK1 2322 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 SPTBP11277 2137 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 ESPL1Q14674 2120 aa0.85□□□□□ -2.27
CHD9-209ENST00000564255 PI4KAP42356 2102 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 S100A3P33764 101 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 DEFB109BQ30KR1 87 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 GDF5OSQ5U4N7 250 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 Q96NJ1 140 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 TMEM14CQ9P0S9 112 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 ANKHD1Q8IWZ3 2542 aaKnown RBP0.84□□□□□ -2.27
CHD9-209ENST00000564255 CENPFP49454 3210 aa0.84□□□□□ -2.27
CHD9-209ENST00000564255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.84□□□□□ -2.28
CHD9-209ENST00000564255 A0A1B0GUT8 65 aa0.84□□□□□ -2.28
CHD9-209ENST00000564255 Q6ZSA8 131 aa0.84□□□□□ -2.28
CHD9-209ENST00000564255 SPTBN1Q01082 2364 aaKnown RBP0.84□□□□□ -2.28
CHD9-209ENST00000564255 RP1P56715 2156 aa0.84□□□□□ -2.28
CHD9-209ENST00000564255 DNAH12Q6ZR08 3092 aa0.84□□□□□ -2.28
CHD9-209ENST00000564255 CFAP46Q8IYW2 2715 aa0.84□□□□□ -2.28
CHD9-209ENST00000564255 ITPR1Q14643 2758 aa0.84□□□□□ -2.28
CHD9-209ENST00000564255 CCDC168Q8NDH2 2452 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 TRAV1-2A0A0B4J238 106 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 CTXND1A0A1B0GTU2 59 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 H0Y9P7 68 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 ANGP03950 147 aaKnown RBP0.83□□□□□ -2.28
CHD9-209ENST00000564255 COX17Q14061 63 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 F5P12259 2224 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 NDUFB1O75438 58 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 IFI6P09912 130 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 FXYD4P59646 89 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 ARFGEF3Q5TH69 2177 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 USP34Q70CQ2 3546 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 DEFB107AQ8IZN7 70 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 LINC00208Q96KT6 92 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 OBSCN-AS1Q96MR7 158 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 LINC00472Q9H8W2 130 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 JMJD1CQ15652 2540 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 UNC13CQ8NB66 2214 aa0.83□□□□□ -2.28
CHD9-209ENST00000564255 TRGV1A0A0A0MS02 117 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 SPINK7P58062 85 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 SPATA8Q6RVD6 105 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 U3KQA8 63 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 BAZ2BQ9UIF8 2168 aaKnown RBP0.82□□□□□ -2.28
CHD9-209ENST00000564255 HIVEP1P15822 2718 aa0.82□□□□□ -2.28
CHD9-209ENST00000564255 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms