RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911		C9JAW5	83 aa		3.13	□□□□□ -1.91
HERPUD1-208	ENST00000563911	CCL20	P78556	96 aa		3.13	□□□□□ -1.91
HERPUD1-208	ENST00000563911	FAM231D	Q6ZW35	169 aa		3.13	□□□□□ -1.91
HERPUD1-208	ENST00000563911	BORCS7	Q96B45	105 aa		3.13	□□□□□ -1.91
HERPUD1-208	ENST00000563911	TMEM242	Q9NWH2	141 aa		3.13	□□□□□ -1.91
HERPUD1-208	ENST00000563911	UQCR10	Q9UDW1	63 aa		3.13	□□□□□ -1.91
HERPUD1-208	ENST00000563911	TRBV20OR9-2	A0A075B6H5	130 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HMSD	A8MTL9	139 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	COX7A2L	O14548	114 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	NCR2	O95944	276 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	CRYGA	P11844	174 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	ADCYAP1	P18509	176 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	SPAG11B	Q08648	103 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	KRTAP5-4	Q6L8H1	288 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	SMDT1	Q9H4I9	107 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	MRPL35	Q9NZE8	188 aa	Known RBP	3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	PKIG	Q9Y2B9	76 aa		3.12	□□□□□ -1.91
HERPUD1-208	ENST00000563911	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	TRAV13-1	A0A0B4J241	112 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BK	O60814	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BJ	P06899	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BO	P23527	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BB	P33778	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	POLR2K	P53803	58 aa	Known RBP	3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BD	P58876	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BC	P62807	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST2H2BE	Q16778	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	MRPL54	Q6P161	138 aa	Known RBP	3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BH	Q93079	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BN	Q99877	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	HIST1H2BM	Q99879	126 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	CNFN	Q9BYD5	112 aa		3.11	□□□□□ -1.91
HERPUD1-208	ENST00000563911	TRBV6-5	A0A0K0K1A5	114 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911		I3L3M4	83 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	NDUFC2	O95298	119 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	SPINK8	P0C7L1	97 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	UBE2B	P63146	152 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	CENPW	Q5EE01	88 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	SLC25A34	Q6PIV7	304 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	C2orf82	Q6UX34	121 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911		Q6ZUT4	128 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	KRTAP13-1	Q8IUC0	172 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	LINC00304	Q8N9R0	145 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	SPANXD	Q9BXN6	97 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	UBE2D4	Q9Y2X8	147 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911	C22orf24	Q9Y442	160 aa		3.1	□□□□□ -1.91
HERPUD1-208	ENST00000563911		F2Z2F3	143 aa		3.09	□□□□□ -1.91
HERPUD1-208	ENST00000563911	TRGC1	P0CF51	173 aa		3.09	□□□□□ -1.91
HERPUD1-208	ENST00000563911	KRTAP5-9	P26371	169 aa		3.09	□□□□□ -1.91
HERPUD1-208	ENST00000563911	C3orf22	Q8N5N4	141 aa		3.09	□□□□□ -1.91
HERPUD1-208	ENST00000563911	TSKU	Q8WUA8	353 aa		3.09	□□□□□ -1.91
HERPUD1-208	ENST00000563911	PLEKHB2	Q96CS7	222 aa		3.09	□□□□□ -1.91
HERPUD1-208	ENST00000563911	FAM236D	A0A1B0GTK5	79 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	KANTR	A0A1W2PQU2	76 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	C7orf77	A4D0Y5	90 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911		K7EP34	96 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	FAM236C	P0DP71	79 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	MEIG1	Q5JSS6	88 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911		Q6Q795	121 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	IGFL1	Q6UW32	110 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	IMMP2L	Q96T52	175 aa		3.08	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TRBV27	A0A0K0K1C4	114 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	NDUFA1	O15239	70 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	BCE1	O60756	84 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	DPM2	O94777	84 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	RPL39	P62891	51 aa	Known RBP	3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	ZNF345	Q14585	488 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	LYRM7	Q5U5X0	104 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	KCNRG	Q8N5I3	272 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	YPEL4	Q96NS1	127 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	XAGE1A	Q9HD64	81 aa		3.07	□□□□□ -1.92
HERPUD1-208	ENST00000563911	CCDC179	H3BU77	68 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TAX1BP3	O14907	124 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	IFITM1	P13164	125 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	PMAIP1	Q13794	54 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	ADIRF	Q15847	76 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	C6orf99	Q4VX62	202 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	HRCT1	Q6UXD1	115 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	FAM213B	Q8TBF2	198 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TMEM191A	Q9H0A3	160 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	ST20	Q9HBF5	79 aa		3.06	□□□□□ -1.92
HERPUD1-208	ENST00000563911	FXYD6-FXYD2	A0A087WZ82	144 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	FAM240A	A0A1B0GVK7	77 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	NUPR1	O60356	82 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	IGLC3	P0DOY3	106 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	HINT1	P49773	126 aa	Predicted RBP	3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	FAM229B	Q4G0N7	80 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	SPATA45	Q537H7	98 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	LCE3A	Q5TA76	89 aa		3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	NAA38	Q9BRA0	125 aa	Known RBP	3.05	□□□□□ -1.92
HERPUD1-208	ENST00000563911	PSPHP1	O15172	72 aa		3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	RPL28	P46779	137 aa	Known RBP	3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	AMN1	Q8IY45	258 aa		3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	LINC00337	Q8N6G1	96 aa		3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	RAB37	Q96AX2	223 aa		3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	GNG13	Q9P2W3	67 aa		3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	LAMTOR3	Q9UHA4	124 aa		3.04	□□□□□ -1.92
HERPUD1-208	ENST00000563911	TRBV30	A0A0K0K1B3	111 aa		3.03	□□□□□ -1.92
HERPUD1-208	ENST00000563911	SPRR5	A0A1B0GTR4	108 aa		3.03	□□□□□ -1.92

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