RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 LINC00336Q6ZUF6 198 aa7.06□□□□□ -1.28
RNF40-204ENST00000563683 KRTAP24-1Q3LI83 254 aa7.05□□□□□ -1.28
RNF40-204ENST00000563683 UBE2AP49459 152 aa7.04□□□□□ -1.28
RNF40-204ENST00000563683 KIAA0087Q14695 138 aa7.04□□□□□ -1.28
RNF40-204ENST00000563683 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
RNF40-204ENST00000563683 LINC00612Q8N6U2 182 aa7.03□□□□□ -1.28
RNF40-204ENST00000563683 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.28
RNF40-204ENST00000563683 M0R2N4 97 aa7.02□□□□□ -1.29
RNF40-204ENST00000563683 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
RNF40-204ENST00000563683 ERC2-IT1O76042 136 aa7□□□□□ -1.29
RNF40-204ENST00000563683 DHRS4-AS1Q9P1J3 65 aa7□□□□□ -1.29
RNF40-204ENST00000563683 ZFHX3Q15911 3703 aa7□□□□□ -1.29
RNF40-204ENST00000563683 HIVEP1P15822 2718 aa6.99□□□□□ -1.29
RNF40-204ENST00000563683 TRBV7-4A0A0J9YYF1 115 aa6.99□□□□□ -1.29
RNF40-204ENST00000563683 C14orf177Q52M58 125 aa6.99□□□□□ -1.29
RNF40-204ENST00000563683 LINC01556Q5JQF7 62 aa6.99□□□□□ -1.29
RNF40-204ENST00000563683 TM2D3Q9BRN9 247 aa6.99□□□□□ -1.29
RNF40-204ENST00000563683 Q8N9L7 120 aa6.98□□□□□ -1.29
RNF40-204ENST00000563683 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
RNF40-204ENST00000563683 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
RNF40-204ENST00000563683 KRTAP10-11P60412 298 aa6.97□□□□□ -1.29
RNF40-204ENST00000563683 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
RNF40-204ENST00000563683 C7orf33Q8WU49 177 aa6.97□□□□□ -1.29
RNF40-204ENST00000563683 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
RNF40-204ENST00000563683 PKIGQ9Y2B9 76 aa6.97□□□□□ -1.29
RNF40-204ENST00000563683 NSD1Q96L73 2696 aaPredicted RBP6.97□□□□□ -1.29
RNF40-204ENST00000563683 C1orf137Q5JT78 98 aa6.96□□□□□ -1.29
RNF40-204ENST00000563683 PRR34Q9NV39 138 aa6.96□□□□□ -1.29
RNF40-204ENST00000563683 Q6ZRP5 223 aa6.96□□□□□ -1.29
RNF40-204ENST00000563683 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
RNF40-204ENST00000563683 H0Y9J4 135 aa6.95□□□□□ -1.3
RNF40-204ENST00000563683 H3BNG1 76 aa6.95□□□□□ -1.3
RNF40-204ENST00000563683 NDUFS5O43920 106 aa6.94□□□□□ -1.3
RNF40-204ENST00000563683 MRPL55Q7Z7F7 128 aaKnown RBP6.94□□□□□ -1.3
RNF40-204ENST00000563683 Q8NDZ9 215 aa6.94□□□□□ -1.3
RNF40-204ENST00000563683 VPREB1P12018 145 aa6.94□□□□□ -1.3
RNF40-204ENST00000563683 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
RNF40-204ENST00000563683 F8WDY8 70 aa6.93□□□□□ -1.3
RNF40-204ENST00000563683 PRYO14603 147 aa6.93□□□□□ -1.3
RNF40-204ENST00000563683 PRLHP81277 87 aa6.93□□□□□ -1.3
RNF40-204ENST00000563683 WFDC13Q8IUB5 93 aa6.93□□□□□ -1.3
RNF40-204ENST00000563683 B9D2Q9BPU9 175 aa6.93□□□□□ -1.3
RNF40-204ENST00000563683 LINC00588Q9Y4M8 146 aa6.93□□□□□ -1.3
RNF40-204ENST00000563683 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
RNF40-204ENST00000563683 DEFB116Q30KQ4 102 aa6.92□□□□□ -1.3
RNF40-204ENST00000563683 C1orf195Q5TG92 126 aa6.92□□□□□ -1.3
RNF40-204ENST00000563683 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
RNF40-204ENST00000563683 CSMD2Q7Z408 3487 aa6.92□□□□□ -1.3
RNF40-204ENST00000563683 FAM30AQ9NZY2 134 aa6.91□□□□□ -1.3
RNF40-204ENST00000563683 MP68P56378 58 aa6.91□□□□□ -1.3
RNF40-204ENST00000563683 NDUFB1O75438 58 aa6.91□□□□□ -1.3
RNF40-204ENST00000563683 MPLKIPQ8TAP9 179 aa6.91□□□□□ -1.3
RNF40-204ENST00000563683 FAM168BA1KXE4 195 aa6.9□□□□□ -1.3
RNF40-204ENST00000563683 V9GYY9 64 aa6.9□□□□□ -1.3
RNF40-204ENST00000563683 C15orf56Q8N910 161 aa6.9□□□□□ -1.31
RNF40-204ENST00000563683 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
RNF40-204ENST00000563683 PRR4Q16378 134 aa6.89□□□□□ -1.31
RNF40-204ENST00000563683 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
RNF40-204ENST00000563683 ST20-AS1Q8NBB2 130 aa6.88□□□□□ -1.31
RNF40-204ENST00000563683 BAHCC1Q9P281 2608 aa6.88□□□□□ -1.31
RNF40-204ENST00000563683 LY6G6CO95867 125 aa6.88□□□□□ -1.31
RNF40-204ENST00000563683 OCR1Q9BZK8 76 aa6.88□□□□□ -1.31
RNF40-204ENST00000563683 IGKV4-1P06312 121 aa6.87□□□□□ -1.31
RNF40-204ENST00000563683 A0A087WSZ3 146 aa6.87□□□□□ -1.31
RNF40-204ENST00000563683 IGLV9-49A0A0B4J1Y8 123 aa6.86□□□□□ -1.31
RNF40-204ENST00000563683 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
RNF40-204ENST00000563683 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
RNF40-204ENST00000563683 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
RNF40-204ENST00000563683 LRCOL1A6NCL2 159 aa6.85□□□□□ -1.31
RNF40-204ENST00000563683 NUPR2A6NF83 97 aa6.85□□□□□ -1.31
RNF40-204ENST00000563683 Q6ZRX8 168 aa6.85□□□□□ -1.31
RNF40-204ENST00000563683 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
RNF40-204ENST00000563683 Q9BRP9 147 aa6.84□□□□□ -1.31
RNF40-204ENST00000563683 A0A1B0GW54 56 aa6.82□□□□□ -1.32
RNF40-204ENST00000563683 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
RNF40-204ENST00000563683 K7EIL1 84 aa6.82□□□□□ -1.32
RNF40-204ENST00000563683 SEC61GP60059 68 aa6.81□□□□□ -1.32
RNF40-204ENST00000563683 SPINK6Q6UWN8 80 aa6.81□□□□□ -1.32
RNF40-204ENST00000563683 KCNQ1DNQ9H478 68 aa6.81□□□□□ -1.32
RNF40-204ENST00000563683 VPS13CQ709C8 3753 aa6.8□□□□□ -1.32
RNF40-204ENST00000563683 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
RNF40-204ENST00000563683 SMIM29Q86T20 159 aa6.79□□□□□ -1.32
RNF40-204ENST00000563683 A0A0G2JQZ4 141 aa6.79□□□□□ -1.32
RNF40-204ENST00000563683 A0A1W2PNN7 141 aa6.79□□□□□ -1.32
RNF40-204ENST00000563683 hDV103S1A0JD37 113 aa6.79□□□□□ -1.32
RNF40-204ENST00000563683 Q8N377 158 aa6.79□□□□□ -1.32
RNF40-204ENST00000563683 TENM4Q6N022 2769 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 MDFIQ99750 246 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 IGLV1-50A0A075B6I6 118 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 PRR15Q8IV56 129 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 Q8NBF4 154 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 LINC00476Q8WZB0 136 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 LINC00208Q96KT6 92 aa6.78□□□□□ -1.32
RNF40-204ENST00000563683 Q1T7F1 81 aa6.77□□□□□ -1.33
RNF40-204ENST00000563683 VWFP04275 2813 aa6.77□□□□□ -1.33
RNF40-204ENST00000563683 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
RNF40-204ENST00000563683 KMT2BQ9UMN6 2715 aaPredicted RBP6.76□□□□□ -1.33
RNF40-204ENST00000563683 TENM1Q9UKZ4 2725 aa6.76□□□□□ -1.33
RNF40-204ENST00000563683 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
RNF40-204ENST00000563683 IGLV5-48A0A075B6I7 105 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms