RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MYMXA0A1B0GTQ4 84 aa10.27□□□□□ -0.77
NME3-204ENST00000563498 KRTAP19-2Q3LHN2 52 aa10.27□□□□□ -0.77
NME3-204ENST00000563498 HIST3H2BBQ8N257 126 aa10.27□□□□□ -0.77
NME3-204ENST00000563498 IFI27L1Q96BM0 104 aa10.27□□□□□ -0.77
NME3-204ENST00000563498 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
NME3-204ENST00000563498 CFC1BP0CG36 223 aa10.24□□□□□ -0.77
NME3-204ENST00000563498 MT1HP80294 61 aa10.24□□□□□ -0.77
NME3-204ENST00000563498 CHCHD1Q96BP2 118 aaKnown RBP10.24□□□□□ -0.77
NME3-204ENST00000563498 C9orf153Q5TBE3 101 aa10.23□□□□□ -0.77
NME3-204ENST00000563498 SPANXB1Q9NS25 103 aaPredicted RBP10.22□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BKO60814 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 IGLV6-57P01721 117 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BJP06899 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BOP23527 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BBP33778 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BDP58876 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BCP62807 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST2H2BEQ16778 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BHQ93079 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BNQ99877 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 HIST1H2BMQ99879 126 aa10.21□□□□□ -0.77
NME3-204ENST00000563498 COA6Q5JTJ3 125 aaKnown RBP10.2□□□□□ -0.78
NME3-204ENST00000563498 M0R143 59 aa10.19□□□□□ -0.78
NME3-204ENST00000563498 NDUFC2O95298 119 aa10.19□□□□□ -0.78
NME3-204ENST00000563498 S100A7L2Q5SY68 101 aa10.19□□□□□ -0.78
NME3-204ENST00000563498 TSPEAR-AS2P59090 65 aa10.18□□□□□ -0.78
NME3-204ENST00000563498 PCOTHQ58A44 107 aa10.18□□□□□ -0.78
NME3-204ENST00000563498 MIEN1Q9BRT3 115 aa10.18□□□□□ -0.78
NME3-204ENST00000563498 TRAV23DV6A0A075B6W5 121 aa10.17□□□□□ -0.78
NME3-204ENST00000563498 DLEU1O43261 78 aa10.17□□□□□ -0.78
NME3-204ENST00000563498 PCP4P48539 62 aa10.17□□□□□ -0.78
NME3-204ENST00000563498 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
NME3-204ENST00000563498 IGLV8-61A0A075B6I0 122 aa10.16□□□□□ -0.78
NME3-204ENST00000563498 LEPROTO15243 131 aa10.16□□□□□ -0.78
NME3-204ENST00000563498 HIST1H2BLQ99880 126 aa10.16□□□□□ -0.78
NME3-204ENST00000563498 LIMD2Q9BT23 127 aa10.16□□□□□ -0.78
NME3-204ENST00000563498 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.78
NME3-204ENST00000563498 FABP4P15090 132 aa10.15□□□□□ -0.78
NME3-204ENST00000563498 ST20-AS1Q8NBB2 130 aa10.14□□□□□ -0.79
NME3-204ENST00000563498 LORP23490 312 aaPredicted RBP10.13□□□□□ -0.79
NME3-204ENST00000563498 NMUP48645 174 aa10.13□□□□□ -0.79
NME3-204ENST00000563498 J3QQQ9 107 aa10.12□□□□□ -0.79
NME3-204ENST00000563498 HSBP1O75506 76 aa10.12□□□□□ -0.79
NME3-204ENST00000563498 TRGC2P03986 189 aa10.12□□□□□ -0.79
NME3-204ENST00000563498 SPRR1BP22528 89 aa10.12□□□□□ -0.79
NME3-204ENST00000563498 PLNP26678 52 aa10.11□□□□□ -0.79
NME3-204ENST00000563498 SLC25A34Q6PIV7 304 aa10.11□□□□□ -0.79
NME3-204ENST00000563498 SNHG12Q9BXW3 62 aa10.11□□□□□ -0.79
NME3-204ENST00000563498 C9orf92A6NGG3 77 aa10.1□□□□□ -0.79
NME3-204ENST00000563498 H0Y8G0 127 aa10.1□□□□□ -0.79
NME3-204ENST00000563498 KRTAP10-6P60371 365 aaPredicted RBP10.1□□□□□ -0.79
NME3-204ENST00000563498 HINT1P49773 126 aaPredicted RBP10.09□□□□□ -0.79
NME3-204ENST00000563498 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
NME3-204ENST00000563498 HERVK_113P61574 105 aa10.08□□□□□ -0.8
NME3-204ENST00000563498 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
NME3-204ENST00000563498 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
NME3-204ENST00000563498 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
NME3-204ENST00000563498 EIF4EBP3O60516 100 aaPredicted RBP10.05□□□□□ -0.8
NME3-204ENST00000563498 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
NME3-204ENST00000563498 LAMTOR3Q9UHA4 124 aa10.05□□□□□ -0.8
NME3-204ENST00000563498 DPM2O94777 84 aa10.04□□□□□ -0.8
NME3-204ENST00000563498 CD164Q04900 197 aa10.04□□□□□ -0.8
NME3-204ENST00000563498 NPC2P61916 151 aa10.03□□□□□ -0.8
NME3-204ENST00000563498 C21orf62-AS1Q17RA5 79 aa10.03□□□□□ -0.8
NME3-204ENST00000563498 ADAMTSL4-AS1Q5T5F5 129 aa10.03□□□□□ -0.8
NME3-204ENST00000563498 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
NME3-204ENST00000563498 IGKCP01834 107 aa10.01□□□□□ -0.81
NME3-204ENST00000563498 M0R2T5 61 aa10□□□□□ -0.81
NME3-204ENST00000563498 COL5A1-AS1Q5SY13 56 aa10□□□□□ -0.81
NME3-204ENST00000563498 Q5XG85 94 aa10□□□□□ -0.81
NME3-204ENST00000563498 SPANXCQ9NY87 97 aa9.99□□□□□ -0.81
NME3-204ENST00000563498 HSPB8Q9UJY1 196 aa9.99□□□□□ -0.81
NME3-204ENST00000563498 LINC00310P59036 64 aa9.98□□□□□ -0.81
NME3-204ENST00000563498 PMCHL2Q9BQD1 86 aa9.98□□□□□ -0.81
NME3-204ENST00000563498 SERF1AO75920 110 aa9.97□□□□□ -0.81
NME3-204ENST00000563498 OR13C6PQ8NH95 151 aa9.97□□□□□ -0.81
NME3-204ENST00000563498 E9PLD3 99 aa9.96□□□□□ -0.82
NME3-204ENST00000563498 ELOF1P60002 83 aaKnown RBP9.96□□□□□ -0.82
NME3-204ENST00000563498 RPL37P61927 97 aaKnown RBP9.96□□□□□ -0.82
NME3-204ENST00000563498 H7C2G1 150 aa9.95□□□□□ -0.82
NME3-204ENST00000563498 SCGB1D1O95968 90 aa9.95□□□□□ -0.82
NME3-204ENST00000563498 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
NME3-204ENST00000563498 SPANXDQ9BXN6 97 aa9.95□□□□□ -0.82
NME3-204ENST00000563498 TAL2Q16559 108 aa9.94□□□□□ -0.82
NME3-204ENST00000563498 Q1RN00 199 aa9.94□□□□□ -0.82
NME3-204ENST00000563498 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
NME3-204ENST00000563498 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
NME3-204ENST00000563498 LITAFQ99732 161 aa9.94□□□□□ -0.82
NME3-204ENST00000563498 TEX49A0A1B0GTD5 131 aa9.93□□□□□ -0.82
NME3-204ENST00000563498 COX7BP24311 80 aa9.93□□□□□ -0.82
NME3-204ENST00000563498 SVIPQ8NHG7 77 aa9.93□□□□□ -0.82
NME3-204ENST00000563498 C20orf202A1L168 122 aa9.92□□□□□ -0.82
NME3-204ENST00000563498 TIMM17BO60830 172 aa9.92□□□□□ -0.82
NME3-204ENST00000563498 FLGP20930 4061 aaPredicted RBP9.91□□□□□ -0.82
NME3-204ENST00000563498 C6orf99Q4VX62 202 aa9.9□□□□□ -0.82
NME3-204ENST00000563498 DEFB105AQ8NG35 78 aa9.9□□□□□ -0.82
NME3-204ENST00000563498 SMIM29Q86T20 159 aa9.89□□□□□ -0.83
NME3-204ENST00000563498 UBE2V1Q13404 147 aa9.88□□□□□ -0.83
NME3-204ENST00000563498 VAMP8Q9BV40 100 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms