RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 C3orf22Q8N5N4 141 aa16.51■□□□□ 0.23
NME3-203ENST00000563367 SPANXCQ9NY87 97 aa16.51■□□□□ 0.23
NME3-203ENST00000563367 TRAV23DV6A0A075B6W5 121 aa16.49■□□□□ 0.23
NME3-203ENST00000563367 ZNF706Q9Y5V0 76 aaPredicted RBP16.49■□□□□ 0.23
NME3-203ENST00000563367 ERC2-IT1O76042 136 aa16.48■□□□□ 0.23
NME3-203ENST00000563367 AKR1D1P51857 326 aa16.48■□□□□ 0.23
NME3-203ENST00000563367 PCP2Q8IVA1 136 aa16.48■□□□□ 0.23
NME3-203ENST00000563367 Q9BRP9 147 aa16.48■□□□□ 0.23
NME3-203ENST00000563367 Q6ZRX8 168 aa16.47■□□□□ 0.23
NME3-203ENST00000563367 SCGB1D4Q6XE38 83 aa16.46■□□□□ 0.23
NME3-203ENST00000563367 LINC00304Q8N9R0 145 aa16.46■□□□□ 0.23
NME3-203ENST00000563367 S100A6P06703 90 aa16.45■□□□□ 0.22
NME3-203ENST00000563367 SPANXDQ9BXN6 97 aa16.45■□□□□ 0.22
NME3-203ENST00000563367 ZNF73O43830 326 aaPredicted RBP16.44■□□□□ 0.22
NME3-203ENST00000563367 PRR4Q16378 134 aa16.44■□□□□ 0.22
NME3-203ENST00000563367 PPDPFQ9H3Y8 114 aa16.44■□□□□ 0.22
NME3-203ENST00000563367 OR13C6PQ8NH95 151 aa16.42■□□□□ 0.22
NME3-203ENST00000563367 SNRPEP62304 92 aaKnown RBP16.41■□□□□ 0.22
NME3-203ENST00000563367 LINC00483Q53H64 154 aa16.39■□□□□ 0.21
NME3-203ENST00000563367 GAGE2AQ6NT46 116 aa16.38■□□□□ 0.21
NME3-203ENST00000563367 LINC00518Q8N0U6 118 aa16.36■□□□□ 0.21
NME3-203ENST00000563367 CBY1Q9Y3M2 126 aa16.36■□□□□ 0.21
NME3-203ENST00000563367 JOSD1Q15040 202 aaPredicted RBP16.35■□□□□ 0.21
NME3-203ENST00000563367 IFITM1P13164 125 aa16.34■□□□□ 0.21
NME3-203ENST00000563367 MUSTN1Q8IVN3 82 aa16.33■□□□□ 0.2
NME3-203ENST00000563367 C5orf52A6NGY3 159 aa16.32■□□□□ 0.2
NME3-203ENST00000563367 Q6ZVH6 145 aa16.32■□□□□ 0.2
NME3-203ENST00000563367 COPS9Q8WXC6 57 aa16.31■□□□□ 0.2
NME3-203ENST00000563367 HSBP1L1C9JCN9 74 aa16.3■□□□□ 0.2
NME3-203ENST00000563367 HINT1P49773 126 aaPredicted RBP16.3■□□□□ 0.2
NME3-203ENST00000563367 RETNLBQ9BQ08 111 aa16.3■□□□□ 0.2
NME3-203ENST00000563367 Q8NBF4 154 aa16.29■□□□□ 0.2
NME3-203ENST00000563367 ST20-AS1Q8NBB2 130 aa16.28■□□□□ 0.2
NME3-203ENST00000563367 CTAG1AP78358 180 aa16.27■□□□□ 0.2
NME3-203ENST00000563367 SCGB1D1O95968 90 aa16.26■□□□□ 0.19
NME3-203ENST00000563367 C6orf99Q4VX62 202 aa16.26■□□□□ 0.19
NME3-203ENST00000563367 SPAG11AQ6PDA7 123 aa16.26■□□□□ 0.19
NME3-203ENST00000563367 IGLV9-49A0A0B4J1Y8 123 aa16.25■□□□□ 0.19
NME3-203ENST00000563367 MOBPQ13875 183 aa16.23■□□□□ 0.19
NME3-203ENST00000563367 RNF213Q63HN8 5207 aa16.23■□□□□ 0.19
NME3-203ENST00000563367 COX7BP24311 80 aa16.22■□□□□ 0.19
NME3-203ENST00000563367 ELOF1P60002 83 aaKnown RBP16.22■□□□□ 0.19
NME3-203ENST00000563367 A6NDN8 102 aa16.21■□□□□ 0.19
NME3-203ENST00000563367 C4orf48Q5BLP8 95 aa16.21■□□□□ 0.19
NME3-203ENST00000563367 DHRS4-AS1Q9P1J3 65 aa16.21■□□□□ 0.19
NME3-203ENST00000563367 SSBP3-AS1Q7Z2R9 100 aa16.17■□□□□ 0.18
NME3-203ENST00000563367 TRBV7-6A0A0J9YX20 115 aa16.14■□□□□ 0.17
NME3-203ENST00000563367 TRAV13-2A0A0B4J235 113 aa16.13■□□□□ 0.17
NME3-203ENST00000563367 SPRR1BP22528 89 aa16.13■□□□□ 0.17
NME3-203ENST00000563367 SPINK1P00995 79 aa16.12■□□□□ 0.17
NME3-203ENST00000563367 COX8AP10176 69 aa16.11■□□□□ 0.17
NME3-203ENST00000563367 C9orf153Q5TBE3 101 aa16.11■□□□□ 0.17
NME3-203ENST00000563367 IGLV7-46A0A075B6I9 117 aa16.1■□□□□ 0.17
NME3-203ENST00000563367 A0A1B0GWB2 263 aa16.1■□□□□ 0.17
NME3-203ENST00000563367 SMIM11BQ8TCY0 68 aa16.1■□□□□ 0.17
NME3-203ENST00000563367 A4D1N5 150 aa16.09■□□□□ 0.17
NME3-203ENST00000563367 DEFB105AQ8NG35 78 aa16.04■□□□□ 0.16
NME3-203ENST00000563367 DLEU1O43261 78 aa16.03■□□□□ 0.16
NME3-203ENST00000563367 TAL2Q16559 108 aa16.03■□□□□ 0.16
NME3-203ENST00000563367 TPRXLQ17RH7 258 aa16.02■□□□□ 0.16
NME3-203ENST00000563367 SLC25A34Q6PIV7 304 aa16.02■□□□□ 0.16
NME3-203ENST00000563367 C14orf144Q96I85 54 aa16.02■□□□□ 0.16
NME3-203ENST00000563367 HIST1H4GQ99525 98 aa16.02■□□□□ 0.16
NME3-203ENST00000563367 PAM16Q9Y3D7 125 aa16.02■□□□□ 0.16
NME3-203ENST00000563367 RPS29P62273 56 aaKnown RBP16.01■□□□□ 0.15
NME3-203ENST00000563367 LAMTOR3Q9UHA4 124 aa16■□□□□ 0.15
NME3-203ENST00000563367 SPATA45Q537H7 98 aa15.99■□□□□ 0.15
NME3-203ENST00000563367 FP248Q71RG6 208 aaPredicted RBP15.99■□□□□ 0.15
NME3-203ENST00000563367 Q8N377 158 aa15.99■□□□□ 0.15
NME3-203ENST00000563367 TEX49A0A1B0GTD5 131 aa15.98■□□□□ 0.15
NME3-203ENST00000563367 LINC01547P58512 204 aaPredicted RBP15.98■□□□□ 0.15
NME3-203ENST00000563367 C12orf57Q99622 126 aa15.98■□□□□ 0.15
NME3-203ENST00000563367 Q1RN00 199 aa15.97■□□□□ 0.15
NME3-203ENST00000563367 VAMP8Q9BV40 100 aa15.96■□□□□ 0.15
NME3-203ENST00000563367 IGLV5-48A0A075B6I7 105 aa15.95■□□□□ 0.14
NME3-203ENST00000563367 SMIM29Q86T20 159 aa15.95■□□□□ 0.14
NME3-203ENST00000563367 CDIP1Q9H305 208 aa15.94■□□□□ 0.14
NME3-203ENST00000563367 NHP2Q9NX24 153 aaKnown RBP15.92■□□□□ 0.14
NME3-203ENST00000563367 SLC25A20O43772 301 aa15.91■□□□□ 0.14
NME3-203ENST00000563367 VAMP3Q15836 100 aa15.91■□□□□ 0.14
NME3-203ENST00000563367 HIGD1BQ9P298 99 aa15.91■□□□□ 0.14
NME3-203ENST00000563367 C2orf91Q6ZV80 131 aa15.9■□□□□ 0.14
NME3-203ENST00000563367 HRCT1Q6UXD1 115 aa15.89■□□□□ 0.13
NME3-203ENST00000563367 LINC00575Q6W349 94 aa15.89■□□□□ 0.13
NME3-203ENST00000563367 KRTAP13-3Q3SY46 172 aa15.87■□□□□ 0.13
NME3-203ENST00000563367 CFC1BP0CG36 223 aa15.85■□□□□ 0.13
NME3-203ENST00000563367 CFC1P0CG37 223 aa15.85■□□□□ 0.13
NME3-203ENST00000563367 PRO1933Q9H354 126 aa15.84■□□□□ 0.13
NME3-203ENST00000563367 MUC17Q685J3 4493 aa15.83■□□□□ 0.13
NME3-203ENST00000563367 PYY3Q5JQD4 70 aa15.83■□□□□ 0.12
NME3-203ENST00000563367 TMA7Q9Y2S6 64 aaKnown RBP15.83■□□□□ 0.12
NME3-203ENST00000563367 MUC2Q02817 5179 aa15.82■□□□□ 0.12
NME3-203ENST00000563367 hADV29S1A0JD25 119 aa15.81■□□□□ 0.12
NME3-203ENST00000563367 A0A0G2JQZ4 141 aa15.8■□□□□ 0.12
NME3-203ENST00000563367 H7C2G1 150 aa15.79■□□□□ 0.12
NME3-203ENST00000563367 CD164Q04900 197 aa15.78■□□□□ 0.12
NME3-203ENST00000563367 Q6ZQY7 126 aa15.78■□□□□ 0.12
NME3-203ENST00000563367 RAB37Q96AX2 223 aa15.77■□□□□ 0.12
NME3-203ENST00000563367 BVES-AS1Q5T3Y7 98 aa15.76■□□□□ 0.11
NME3-203ENST00000563367 CEND1Q8N111 149 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms