RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NDUFC1O43677 76 aa8.52□□□□□ -1.05
USB1-207ENST00000563149 Q8N377 158 aa8.52□□□□□ -1.05
USB1-207ENST00000563149 MRAPQ8TCY5 172 aa8.52□□□□□ -1.05
USB1-207ENST00000563149 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
USB1-207ENST00000563149 SCXQ7RTU7 201 aa8.51□□□□□ -1.05
USB1-207ENST00000563149 SPRR1AP35321 89 aa8.5□□□□□ -1.05
USB1-207ENST00000563149 Q6ZRX8 168 aa8.5□□□□□ -1.05
USB1-207ENST00000563149 RMI2Q96E14 147 aa8.5□□□□□ -1.05
USB1-207ENST00000563149 HELZ2Q9BYK8 2649 aaKnown RBP8.5□□□□□ -1.05
USB1-207ENST00000563149 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
USB1-207ENST00000563149 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
USB1-207ENST00000563149 OXTP01178 125 aa8.49□□□□□ -1.05
USB1-207ENST00000563149 IGKV4-1P06312 121 aa8.48□□□□□ -1.05
USB1-207ENST00000563149 SERP1Q9Y6X1 66 aa8.48□□□□□ -1.05
USB1-207ENST00000563149 EPM2AB3EWF7 344 aa8.48□□□□□ -1.05
USB1-207ENST00000563149 BPY2O14599 106 aa8.48□□□□□ -1.05
USB1-207ENST00000563149 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
USB1-207ENST00000563149 TM2D3Q9BRN9 247 aa8.48□□□□□ -1.05
USB1-207ENST00000563149 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
USB1-207ENST00000563149 DEFB105AQ8NG35 78 aa8.47□□□□□ -1.05
USB1-207ENST00000563149 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.05
USB1-207ENST00000563149 NSD1Q96L73 2696 aaPredicted RBP8.46□□□□□ -1.06
USB1-207ENST00000563149 ATP5EP56381 51 aaPredicted RBP8.45□□□□□ -1.06
USB1-207ENST00000563149 TNP2Q05952 138 aa8.45□□□□□ -1.06
USB1-207ENST00000563149 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
USB1-207ENST00000563149 OTOGQ6ZRI0 2925 aa8.45□□□□□ -1.06
USB1-207ENST00000563149 Q9BRP9 147 aa8.45□□□□□ -1.06
USB1-207ENST00000563149 SNURFQ9Y675 71 aa8.45□□□□□ -1.06
USB1-207ENST00000563149 F8WEM9 126 aa8.44□□□□□ -1.06
USB1-207ENST00000563149 KRTAP24-1Q3LI83 254 aa8.44□□□□□ -1.06
USB1-207ENST00000563149 TEP1Q99973 2627 aaKnown RBP8.43□□□□□ -1.06
USB1-207ENST00000563149 TENM1Q9UKZ4 2725 aa8.43□□□□□ -1.06
USB1-207ENST00000563149 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
USB1-207ENST00000563149 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
USB1-207ENST00000563149 C3orf84H3BNL1 204 aa8.43□□□□□ -1.06
USB1-207ENST00000563149 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
USB1-207ENST00000563149 Q5XG85 94 aa8.42□□□□□ -1.06
USB1-207ENST00000563149 MRPL55Q7Z7F7 128 aaKnown RBP8.42□□□□□ -1.06
USB1-207ENST00000563149 TMEM254Q8TBM7 123 aa8.42□□□□□ -1.06
USB1-207ENST00000563149 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
USB1-207ENST00000563149 A0A1W2PNM2 257 aa8.41□□□□□ -1.06
USB1-207ENST00000563149 Q8NBF4 154 aa8.41□□□□□ -1.06
USB1-207ENST00000563149 SPRR4Q96PI1 79 aa8.41□□□□□ -1.06
USB1-207ENST00000563149 FAM168BA1KXE4 195 aa8.4□□□□□ -1.06
USB1-207ENST00000563149 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
USB1-207ENST00000563149 Q8N9L7 120 aa8.4□□□□□ -1.06
USB1-207ENST00000563149 CASC10Q5T4H9 136 aa8.39□□□□□ -1.07
USB1-207ENST00000563149 TRRAPQ9Y4A5 3859 aa8.38□□□□□ -1.07
USB1-207ENST00000563149 REG3GQ6UW15 175 aa8.38□□□□□ -1.07
USB1-207ENST00000563149 ST20-AS1Q8NBB2 130 aa8.38□□□□□ -1.07
USB1-207ENST00000563149 ATRQ13535 2644 aa8.37□□□□□ -1.07
USB1-207ENST00000563149 A0A0U1RQV1 116 aa8.37□□□□□ -1.07
USB1-207ENST00000563149 UBE2BP63146 152 aa8.37□□□□□ -1.07
USB1-207ENST00000563149 SMIM26A0A096LP01 95 aa8.35□□□□□ -1.07
USB1-207ENST00000563149 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
USB1-207ENST00000563149 C4orf48Q5BLP8 95 aa8.33□□□□□ -1.08
USB1-207ENST00000563149 SMIM29Q86T20 159 aa8.33□□□□□ -1.08
USB1-207ENST00000563149 LCE6AA0A183 80 aa8.32□□□□□ -1.08
USB1-207ENST00000563149 HECTD1Q9ULT8 2610 aa8.31□□□□□ -1.08
USB1-207ENST00000563149 C16orf90A8MZG2 172 aa8.31□□□□□ -1.08
USB1-207ENST00000563149 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
USB1-207ENST00000563149 DSCR10P59022 87 aa8.3□□□□□ -1.08
USB1-207ENST00000563149 CNBPP62633 177 aaKnown RBP8.3□□□□□ -1.08
USB1-207ENST00000563149 HRCT1Q6UXD1 115 aa8.3□□□□□ -1.08
USB1-207ENST00000563149 LINC00476Q8WZB0 136 aa8.3□□□□□ -1.08
USB1-207ENST00000563149 DNAH1Q9P2D7 4330 aa8.3□□□□□ -1.08
USB1-207ENST00000563149 DNAH3Q8TD57 4116 aa8.29□□□□□ -1.08
USB1-207ENST00000563149 CMYA5Q8N3K9 4069 aa8.28□□□□□ -1.08
USB1-207ENST00000563149 K7EIL1 84 aa8.27□□□□□ -1.08
USB1-207ENST00000563149 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.08
USB1-207ENST00000563149 FAM30AQ9NZY2 134 aa8.27□□□□□ -1.08
USB1-207ENST00000563149 A0A096LNI7 61 aa8.26□□□□□ -1.09
USB1-207ENST00000563149 C14orf177Q52M58 125 aa8.26□□□□□ -1.09
USB1-207ENST00000563149 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
USB1-207ENST00000563149 K7EQZ3 153 aa8.25□□□□□ -1.09
USB1-207ENST00000563149 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
USB1-207ENST00000563149 A0A1W2PNN7 141 aa8.24□□□□□ -1.09
USB1-207ENST00000563149 HCG22E2RYF7 251 aa8.24□□□□□ -1.09
USB1-207ENST00000563149 H0Y9J4 135 aa8.23□□□□□ -1.09
USB1-207ENST00000563149 PSCAO43653 123 aa8.23□□□□□ -1.09
USB1-207ENST00000563149 PRB2P02812 416 aaPredicted RBP8.23□□□□□ -1.09
USB1-207ENST00000563149 PKIGQ9Y2B9 76 aa8.23□□□□□ -1.09
USB1-207ENST00000563149 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
USB1-207ENST00000563149 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
USB1-207ENST00000563149 PKD1L1Q8TDX9 2849 aa8.22□□□□□ -1.09
USB1-207ENST00000563149 SPRR1BP22528 89 aa8.22□□□□□ -1.09
USB1-207ENST00000563149 ANK2Q01484 3957 aa8.22□□□□□ -1.09
USB1-207ENST00000563149 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
USB1-207ENST00000563149 PRLHP81277 87 aa8.21□□□□□ -1.1
USB1-207ENST00000563149 UBE2AP49459 152 aa8.2□□□□□ -1.1
USB1-207ENST00000563149 KRTAP1-5Q9BYS1 174 aa8.2□□□□□ -1.1
USB1-207ENST00000563149 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
USB1-207ENST00000563149 UBE2DNLQ8IWF7 75 aa8.18□□□□□ -1.1
USB1-207ENST00000563149 APLNQ9ULZ1 77 aa8.18□□□□□ -1.1
USB1-207ENST00000563149 A0A087WSZ3 146 aa8.17□□□□□ -1.1
USB1-207ENST00000563149 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
USB1-207ENST00000563149 HUWE1Q7Z6Z7 4374 aaKnown RBP8.17□□□□□ -1.1
USB1-207ENST00000563149 C9orf163Q8N9P6 203 aa8.15□□□□□ -1.1
USB1-207ENST00000563149 BAHCC1Q9P281 2608 aa8.15□□□□□ -1.11
USB1-207ENST00000563149 A0A0G2JQZ4 141 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms