RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 A0A1B0GW54 56 aa5.01□□□□□ -1.61
CFDP1-202ENST00000562602 ELOF1P60002 83 aaKnown RBP5.01□□□□□ -1.61
CFDP1-202ENST00000562602 LINC01556Q5JQF7 62 aa5.01□□□□□ -1.61
CFDP1-202ENST00000562602 KPRPQ5T749 579 aaPredicted RBP5.01□□□□□ -1.61
CFDP1-202ENST00000562602 C1orf43Q9BWL3 253 aa5.01□□□□□ -1.61
CFDP1-202ENST00000562602 J3KT08 172 aa5□□□□□ -1.61
CFDP1-202ENST00000562602 Q6ZQY7 126 aa5□□□□□ -1.61
CFDP1-202ENST00000562602 ANK2Q01484 3957 aa4.99□□□□□ -1.61
CFDP1-202ENST00000562602 TRBV7-4A0A0J9YYF1 115 aa4.99□□□□□ -1.61
CFDP1-202ENST00000562602 VPREB1P12018 145 aa4.99□□□□□ -1.61
CFDP1-202ENST00000562602 UPK3BQ9BT76 320 aa4.99□□□□□ -1.61
CFDP1-202ENST00000562602 LOC107984640A0A0U1RRK4 108 aa4.98□□□□□ -1.61
CFDP1-202ENST00000562602 Q8NDZ9 215 aa4.98□□□□□ -1.61
CFDP1-202ENST00000562602 SPATA3Q8NHX4 192 aa4.98□□□□□ -1.61
CFDP1-202ENST00000562602 RMI2Q96E14 147 aa4.98□□□□□ -1.61
CFDP1-202ENST00000562602 JMJD1CQ15652 2540 aa4.97□□□□□ -1.61
CFDP1-202ENST00000562602 FN1P02751 2386 aaKnown RBP4.97□□□□□ -1.61
CFDP1-202ENST00000562602 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
CFDP1-202ENST00000562602 TLX1NBP0CAT3 122 aa4.97□□□□□ -1.61
CFDP1-202ENST00000562602 LINC01547P58512 204 aaPredicted RBP4.97□□□□□ -1.61
CFDP1-202ENST00000562602 SYCNQ0VAF6 134 aa4.97□□□□□ -1.61
CFDP1-202ENST00000562602 KRTAP26-1Q6PEX3 210 aa4.97□□□□□ -1.61
CFDP1-202ENST00000562602 DHRS4-AS1Q9P1J3 65 aa4.97□□□□□ -1.61
CFDP1-202ENST00000562602 A0A087WVE0 104 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 Q6ZVQ6 151 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 WFDC10BQ8IUB3 73 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 NKAPP1Q8N9T2 125 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 KCNQ1DNQ9H478 68 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 XAGE1AQ9HD64 81 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 COL6A5A8TX70 2615 aa4.96□□□□□ -1.62
CFDP1-202ENST00000562602 DEFB131BA0A096LNP1 70 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 NDUFC1O43677 76 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 HAMPP81172 84 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 ESRGQ1W209 222 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 HIGD2BQ4VC39 106 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 Q6ZRU5 148 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 C3orf56Q8N813 242 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 C11orf45Q8TAV5 145 aa4.95□□□□□ -1.62
CFDP1-202ENST00000562602 ATRQ13535 2644 aa4.94□□□□□ -1.62
CFDP1-202ENST00000562602 IGLV5-37A0A075B6J1 123 aa4.94□□□□□ -1.62
CFDP1-202ENST00000562602 IGKV2D-24A0A075B6R9 120 aa4.94□□□□□ -1.62
CFDP1-202ENST00000562602 Q6ZTC4 211 aa4.94□□□□□ -1.62
CFDP1-202ENST00000562602 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
CFDP1-202ENST00000562602 TRAV10A0A0B4J240 114 aa4.93□□□□□ -1.62
CFDP1-202ENST00000562602 PRYO14603 147 aa4.93□□□□□ -1.62
CFDP1-202ENST00000562602 ERC2-IT1O76042 136 aa4.93□□□□□ -1.62
CFDP1-202ENST00000562602 FAM19A1Q7Z5A9 133 aa4.93□□□□□ -1.62
CFDP1-202ENST00000562602 MRAPQ8TCY5 172 aa4.93□□□□□ -1.62
CFDP1-202ENST00000562602 STAB1Q9NY15 2570 aa4.93□□□□□ -1.62
CFDP1-202ENST00000562602 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
CFDP1-202ENST00000562602 FUSP35637 526 aaKnown RBP eCLIP4.91□□□□□ -1.62
CFDP1-202ENST00000562602 ATP5EP56381 51 aaPredicted RBP4.91□□□□□ -1.62
CFDP1-202ENST00000562602 KRTAP10-11P60412 298 aa4.91□□□□□ -1.62
CFDP1-202ENST00000562602 KLKP1Q107X0 134 aa4.91□□□□□ -1.62
CFDP1-202ENST00000562602 NREPQ16612 68 aa4.91□□□□□ -1.62
CFDP1-202ENST00000562602 Q6ZRP5 223 aa4.91□□□□□ -1.62
CFDP1-202ENST00000562602 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.63
CFDP1-202ENST00000562602 NBEAL1Q6ZS30 2694 aa4.89□□□□□ -1.63
CFDP1-202ENST00000562602 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
CFDP1-202ENST00000562602 C7orf33Q8WU49 177 aa4.89□□□□□ -1.63
CFDP1-202ENST00000562602 RETNQ9HD89 108 aa4.89□□□□□ -1.63
CFDP1-202ENST00000562602 PKIGQ9Y2B9 76 aa4.89□□□□□ -1.63
CFDP1-202ENST00000562602 IGLV1-50A0A075B6I6 118 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 FAM236DA0A1B0GTK5 79 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 BPY2O14599 106 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 FAM236CP0DP71 79 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 SPRR1AP35321 89 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 Q6ZRX8 168 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 C20orf197Q8N268 126 aa4.88□□□□□ -1.63
CFDP1-202ENST00000562602 SERP1Q9Y6X1 66 aa4.87□□□□□ -1.63
CFDP1-202ENST00000562602 TENM1Q9UKZ4 2725 aa4.87□□□□□ -1.63
CFDP1-202ENST00000562602 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
CFDP1-202ENST00000562602 Q8N377 158 aa4.86□□□□□ -1.63
CFDP1-202ENST00000562602 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
CFDP1-202ENST00000562602 RPL37AP8A6NKH3 93 aa4.85□□□□□ -1.63
CFDP1-202ENST00000562602 M0R2N4 97 aa4.85□□□□□ -1.63
CFDP1-202ENST00000562602 KRTAP24-1Q3LI83 254 aa4.85□□□□□ -1.63
CFDP1-202ENST00000562602 C14orf177Q52M58 125 aa4.85□□□□□ -1.63
CFDP1-202ENST00000562602 MRPL55Q7Z7F7 128 aaKnown RBP4.85□□□□□ -1.63
CFDP1-202ENST00000562602 TM2D3Q9BRN9 247 aa4.85□□□□□ -1.63
CFDP1-202ENST00000562602 LINC00588Q9Y4M8 146 aa4.85□□□□□ -1.63
CFDP1-202ENST00000562602 F8WEM9 126 aa4.84□□□□□ -1.63
CFDP1-202ENST00000562602 KRTAP4-16G5E9R7 235 aaPredicted RBP4.84□□□□□ -1.63
CFDP1-202ENST00000562602 C5orf47Q569G3 176 aa4.84□□□□□ -1.63
CFDP1-202ENST00000562602 SERTAD4-AS1Q5TG53 156 aa4.84□□□□□ -1.63
CFDP1-202ENST00000562602 PKD1L1Q8TDX9 2849 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 H7BZZ5 65 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 C1orf137Q5JT78 98 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 REG3GQ6UW15 175 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 Q8NBF4 154 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 SPRR4Q96PI1 79 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 CYSTM1Q9H1C7 97 aa4.83□□□□□ -1.64
CFDP1-202ENST00000562602 EPM2AB3EWF7 344 aa4.82□□□□□ -1.64
CFDP1-202ENST00000562602 TMEM254Q8TBM7 123 aa4.82□□□□□ -1.64
CFDP1-202ENST00000562602 NBEAL2Q6ZNJ1 2754 aa4.81□□□□□ -1.64
CFDP1-202ENST00000562602 CNBPP62633 177 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms