RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 CDC42SE2Q9NRR3 84 aa3.34□□□□□ -1.87
LINC01243-201ENST00000562065 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
LINC01243-201ENST00000562065 PMVKQ15126 192 aa3.33□□□□□ -1.88
LINC01243-201ENST00000562065 RNASE13Q5GAN3 156 aaKnown RBP3.33□□□□□ -1.88
LINC01243-201ENST00000562065 C1orf137Q5JT78 98 aa3.33□□□□□ -1.88
LINC01243-201ENST00000562065 COL5A1-AS1Q5SY13 56 aa3.33□□□□□ -1.88
LINC01243-201ENST00000562065 IGIPA6NJ69 53 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 COX7A2LO14548 114 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 IGLV7-43P04211 117 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 NMUP48645 174 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 SPAG11BQ08648 103 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 BOD1L2Q8IYS8 172 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 FAM104AQ969W3 186 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 TMEM101Q96IK0 257 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 CAMK2N2Q96S95 79 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 SNHG12Q9BXW3 62 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 SPANXA1Q9NS26 97 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 MRPL35Q9NZE8 188 aaKnown RBP3.32□□□□□ -1.88
LINC01243-201ENST00000562065 UBE2D4Q9Y2X8 147 aa3.32□□□□□ -1.88
LINC01243-201ENST00000562065 SEC11AP67812 179 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 HSD52Q0P140 79 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 SS18Q15532 418 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 BATFQ16520 125 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 DIRC1Q969H9 104 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 TIMM21Q9BVV7 248 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 VCX2Q9H322 139 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 HIGD1BQ9P298 99 aa3.31□□□□□ -1.88
LINC01243-201ENST00000562065 IGLV1-50A0A075B6I6 118 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 TRAV13-1A0A0B4J241 112 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 C11orf86A6NJI1 115 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 E9PLD3 99 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
LINC01243-201ENST00000562065 TAL2Q16559 108 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 FAM19A5Q7Z5A7 132 aaPredicted RBP3.3□□□□□ -1.88
LINC01243-201ENST00000562065 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 C6orf48Q9UBA6 75 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 CBY1Q9Y3M2 126 aa3.3□□□□□ -1.88
LINC01243-201ENST00000562065 CSDC2Q9Y534 153 aaKnown RBP3.3□□□□□ -1.88
LINC01243-201ENST00000562065 IGHV3OR16-9A0A0B4J2B5 98 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 MYMXA0A1B0GTQ4 84 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 A6NDN8 102 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 M0QXV9 152 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 TLX1NBP0CAT3 122 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 HINT1P49773 126 aaPredicted RBP3.29□□□□□ -1.88
LINC01243-201ENST00000562065 MRPS36P82909 103 aaKnown RBP3.29□□□□□ -1.88
LINC01243-201ENST00000562065 ORAOV1Q8WV07 137 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 PLEKHB2Q96CS7 222 aa3.29□□□□□ -1.88
LINC01243-201ENST00000562065 H3BRM9 83 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 NDUFA1O15239 70 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 LGALS3P17931 250 aaKnown RBP3.28□□□□□ -1.88
LINC01243-201ENST00000562065 C9orf129Q5T035 196 aaKnown RBP3.28□□□□□ -1.88
LINC01243-201ENST00000562065 BVES-AS1Q5T3Y7 98 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 TMEM170BQ5T4T1 132 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 LINC00242Q5T6M2 205 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 C2orf91Q6ZV80 131 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 PCP2Q8IVA1 136 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 AMELXQ99217 191 aa3.28□□□□□ -1.88
LINC01243-201ENST00000562065 GEMIN7Q9H840 131 aaKnown RBP3.28□□□□□ -1.88
LINC01243-201ENST00000562065 IGKV2D-26A0A0A0MRZ7 120 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 A0A1B0GV90 55 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 TINCRA0A1B0GVN0 87 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 ZNF815PA8K554 130 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 LEPROTO15243 131 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 KIAA0087Q14695 138 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 PRR4Q16378 134 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 UNQ6190/PRO20217Q6UXQ8 127 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
LINC01243-201ENST00000562065 TMEM223A0PJW6 202 aa3.26□□□□□ -1.89
LINC01243-201ENST00000562065 J3QQQ9 107 aa3.26□□□□□ -1.89
LINC01243-201ENST00000562065 ZNF22P17026 224 aaPredicted RBP3.26□□□□□ -1.89
LINC01243-201ENST00000562065 RPL13AP40429 203 aaKnown RBP3.26□□□□□ -1.89
LINC01243-201ENST00000562065 UBE2D1P51668 147 aa3.26□□□□□ -1.89
LINC01243-201ENST00000562065 HERVK_113P63121 156 aa3.26□□□□□ -1.89
LINC01243-201ENST00000562065 LINC00469Q8N7U9 141 aa3.26□□□□□ -1.89
LINC01243-201ENST00000562065 HIST1H4GQ99525 98 aa3.26□□□□□ -1.89
LINC01243-201ENST00000562065 TRBV30A0A0K0K1B3 111 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 A0A0U1RQV1 116 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 TMEM238C9JI98 176 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 NDUFC2-KCTD14E9PQ53 114 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 F8WDY8 70 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 UBE2BP63146 152 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 C2orf82Q6UX34 121 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 FAM19A3Q7Z5A8 133 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 CEND1Q8N111 149 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 SPANXB1Q9NS25 103 aaPredicted RBP3.25□□□□□ -1.89
LINC01243-201ENST00000562065 TP73-AS1Q9UF72 201 aa3.25□□□□□ -1.89
LINC01243-201ENST00000562065 SMIM13P0DJ93 91 aa3.24□□□□□ -1.89
LINC01243-201ENST00000562065 VAMP3Q15836 100 aa3.24□□□□□ -1.89
LINC01243-201ENST00000562065 COPS9Q8WXC6 57 aa3.24□□□□□ -1.89
LINC01243-201ENST00000562065 TTTY13Q9BZ97 58 aa3.24□□□□□ -1.89
LINC01243-201ENST00000562065 DHRS4-AS1Q9P1J3 65 aa3.24□□□□□ -1.89
LINC01243-201ENST00000562065 TAX1BP3O14907 124 aa3.23□□□□□ -1.89
LINC01243-201ENST00000562065 ZNF861PO60384 105 aa3.23□□□□□ -1.89
LINC01243-201ENST00000562065 TIMM17BO60830 172 aa3.23□□□□□ -1.89
LINC01243-201ENST00000562065 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
LINC01243-201ENST00000562065 LYRM7Q5U5X0 104 aa3.23□□□□□ -1.89
LINC01243-201ENST00000562065 SFTA2Q6UW10 78 aa3.23□□□□□ -1.89
LINC01243-201ENST00000562065 GTF2H5Q6ZYL4 71 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms