RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 A0A0U1RQV1 116 aa7.77□□□□□ -1.17
PCAT1-202ENST00000561978 C6orf223Q8N319 242 aa7.77□□□□□ -1.17
PCAT1-202ENST00000561978 ACYP1P07311 99 aa7.76□□□□□ -1.17
PCAT1-202ENST00000561978 C10orf25Q5T742 122 aa7.76□□□□□ -1.17
PCAT1-202ENST00000561978 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
PCAT1-202ENST00000561978 INAFM2P0DMQ5 153 aa7.75□□□□□ -1.17
PCAT1-202ENST00000561978 A0A087WYN8 130 aa7.74□□□□□ -1.17
PCAT1-202ENST00000561978 S100A7L2Q5SY68 101 aa7.74□□□□□ -1.17
PCAT1-202ENST00000561978 Q9HAA7 133 aa7.74□□□□□ -1.17
PCAT1-202ENST00000561978 LAMTOR3Q9UHA4 124 aa7.74□□□□□ -1.17
PCAT1-202ENST00000561978 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
PCAT1-202ENST00000561978 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 Q6ZRU5 148 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 KRTAP19-1Q8IUB9 90 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 LECT2O14960 151 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 CAMK2N2Q96S95 79 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 C6orf48Q9UBA6 75 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 RYR2Q92736 4967 aa7.73□□□□□ -1.17
PCAT1-202ENST00000561978 DNAH10OSP0CZ25 163 aa7.72□□□□□ -1.17
PCAT1-202ENST00000561978 DSCR8Q96T75 97 aa7.72□□□□□ -1.17
PCAT1-202ENST00000561978 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
PCAT1-202ENST00000561978 BRK1Q8WUW1 75 aa7.71□□□□□ -1.17
PCAT1-202ENST00000561978 APLNQ9ULZ1 77 aa7.71□□□□□ -1.17
PCAT1-202ENST00000561978 NCR3O14931 201 aa7.71□□□□□ -1.18
PCAT1-202ENST00000561978 ORMDL1Q9P0S3 153 aa7.71□□□□□ -1.18
PCAT1-202ENST00000561978 ALMS1Q8TCU4 4167 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 VPS13DQ5THJ4 4388 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 LCE3BQ5TA77 95 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 LINC00167Q96N53 147 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 C22orf24Q9Y442 160 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 IGKV2D-24A0A075B6R9 120 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 PRR15Q8IV56 129 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 Q8N814 137 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
PCAT1-202ENST00000561978 LY6G6CO95867 125 aa7.69□□□□□ -1.18
PCAT1-202ENST00000561978 IGLV6-57P01721 117 aa7.69□□□□□ -1.18
PCAT1-202ENST00000561978 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
PCAT1-202ENST00000561978 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
PCAT1-202ENST00000561978 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
PCAT1-202ENST00000561978 TMEM256-PLSCR3K7ERE1 68 aa7.68□□□□□ -1.18
PCAT1-202ENST00000561978 ATOX1O00244 68 aa7.68□□□□□ -1.18
PCAT1-202ENST00000561978 C6orf99Q4VX62 202 aa7.68□□□□□ -1.18
PCAT1-202ENST00000561978 Q8NDZ9 215 aa7.68□□□□□ -1.18
PCAT1-202ENST00000561978 LCE6AA0A183 80 aa7.67□□□□□ -1.18
PCAT1-202ENST00000561978 hADV29S1A0JD25 119 aa7.67□□□□□ -1.18
PCAT1-202ENST00000561978 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
PCAT1-202ENST00000561978 OBSCN-AS1Q96MR7 158 aa7.67□□□□□ -1.18
PCAT1-202ENST00000561978 RMI2Q96E14 147 aa7.66□□□□□ -1.18
PCAT1-202ENST00000561978 LINC00588Q9Y4M8 146 aa7.66□□□□□ -1.18
PCAT1-202ENST00000561978 H3BQ85 93 aa7.66□□□□□ -1.18
PCAT1-202ENST00000561978 LINC00575Q6W349 94 aa7.66□□□□□ -1.18
PCAT1-202ENST00000561978 FRAS1Q86XX4 4008 aa7.65□□□□□ -1.18
PCAT1-202ENST00000561978 JMJD7-PLA2G4BH0Y9G9 81 aa7.65□□□□□ -1.18
PCAT1-202ENST00000561978 SLPIP03973 132 aa7.65□□□□□ -1.18
PCAT1-202ENST00000561978 SYCNQ0VAF6 134 aa7.65□□□□□ -1.18
PCAT1-202ENST00000561978 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
PCAT1-202ENST00000561978 XAGE1AQ9HD64 81 aa7.65□□□□□ -1.18
PCAT1-202ENST00000561978 TRAV23DV6A0A075B6W5 121 aa7.64□□□□□ -1.19
PCAT1-202ENST00000561978 M0R378 163 aa7.64□□□□□ -1.19
PCAT1-202ENST00000561978 UPK3BQ9BT76 320 aa7.64□□□□□ -1.19
PCAT1-202ENST00000561978 TRBV7-6A0A0J9YX20 115 aa7.63□□□□□ -1.19
PCAT1-202ENST00000561978 TRBV10-3A0A0K0K1G6 114 aa7.62□□□□□ -1.19
PCAT1-202ENST00000561978 LINC00643Q86TS7 51 aa7.62□□□□□ -1.19
PCAT1-202ENST00000561978 UBE2DNLQ8IWF7 75 aa7.62□□□□□ -1.19
PCAT1-202ENST00000561978 DIRC1Q969H9 104 aa7.62□□□□□ -1.19
PCAT1-202ENST00000561978 DNAH2Q9P225 4427 aa7.62□□□□□ -1.19
PCAT1-202ENST00000561978 SDIM1Q6ZPB5 146 aa7.62□□□□□ -1.19
PCAT1-202ENST00000561978 C14orf132Q9NPU4 83 aa7.61□□□□□ -1.19
PCAT1-202ENST00000561978 ZNF73O43830 326 aaPredicted RBP7.6□□□□□ -1.19
PCAT1-202ENST00000561978 HIST1H4AP62805 103 aaKnown RBP7.6□□□□□ -1.19
PCAT1-202ENST00000561978 TLX1NBP0CAT3 122 aa7.6□□□□□ -1.19
PCAT1-202ENST00000561978 Q6ZRP5 223 aa7.6□□□□□ -1.19
PCAT1-202ENST00000561978 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
PCAT1-202ENST00000561978 COX7BP24311 80 aa7.59□□□□□ -1.19
PCAT1-202ENST00000561978 C9orf129Q5T035 196 aaKnown RBP7.59□□□□□ -1.19
PCAT1-202ENST00000561978 DNAH6Q9C0G6 4158 aa7.59□□□□□ -1.19
PCAT1-202ENST00000561978 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.2
PCAT1-202ENST00000561978 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.2
PCAT1-202ENST00000561978 CCKP06307 115 aa7.58□□□□□ -1.2
PCAT1-202ENST00000561978 DNAH10Q8IVF4 4471 aa7.58□□□□□ -1.2
PCAT1-202ENST00000561978 M0R2N4 97 aa7.57□□□□□ -1.2
PCAT1-202ENST00000561978 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
PCAT1-202ENST00000561978 SERP2Q8N6R1 65 aa7.57□□□□□ -1.2
PCAT1-202ENST00000561978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
PCAT1-202ENST00000561978 PLA2G2DQ9UNK4 145 aa7.57□□□□□ -1.2
PCAT1-202ENST00000561978 FP248Q71RG6 208 aaPredicted RBP7.56□□□□□ -1.2
PCAT1-202ENST00000561978 NKAPP1Q8N9T2 125 aa7.56□□□□□ -1.2
PCAT1-202ENST00000561978 SMCR5Q8TEV8 140 aa7.56□□□□□ -1.2
PCAT1-202ENST00000561978 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
PCAT1-202ENST00000561978 RBM3P98179 157 aaKnown RBP7.55□□□□□ -1.2
PCAT1-202ENST00000561978 Q6ZQY7 126 aa7.54□□□□□ -1.2
PCAT1-202ENST00000561978 PDE6GP18545 87 aa7.53□□□□□ -1.2
PCAT1-202ENST00000561978 KCNQ1DNQ9H478 68 aa7.53□□□□□ -1.2
PCAT1-202ENST00000561978 C8orf87E5RJ46 101 aa7.52□□□□□ -1.21
PCAT1-202ENST00000561978 LINC00846Q9NV44 126 aa7.52□□□□□ -1.21
PCAT1-202ENST00000561978 IGLV5-37A0A075B6J1 123 aa7.51□□□□□ -1.21
PCAT1-202ENST00000561978 LOC110117498A0A087WWA1 95 aa7.51□□□□□ -1.21
PCAT1-202ENST00000561978 KRTAP1-5Q9BYS1 174 aa7.51□□□□□ -1.21
PCAT1-202ENST00000561978 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms