RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 NOTCH2Q04721 2471 aa9.2□□□□□ -0.94
VPS9D1-202ENST00000561976 HIVEP1P15822 2718 aa9.19□□□□□ -0.94
VPS9D1-202ENST00000561976 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
VPS9D1-202ENST00000561976 TENM1Q9UKZ4 2725 aa9.19□□□□□ -0.94
VPS9D1-202ENST00000561976 IGKV2D-24A0A075B6R9 120 aa9.18□□□□□ -0.94
VPS9D1-202ENST00000561976 A0A0U1RQV1 116 aa9.18□□□□□ -0.94
VPS9D1-202ENST00000561976 IGKV4-1P06312 121 aa9.18□□□□□ -0.94
VPS9D1-202ENST00000561976 SMIM26A0A096LP01 95 aa9.17□□□□□ -0.94
VPS9D1-202ENST00000561976 C1orf195Q5TG92 126 aa9.17□□□□□ -0.94
VPS9D1-202ENST00000561976 RETNQ9HD89 108 aa9.17□□□□□ -0.94
VPS9D1-202ENST00000561976 INAFM1C9JVW0 142 aa9.16□□□□□ -0.94
VPS9D1-202ENST00000561976 SYCNQ0VAF6 134 aa9.16□□□□□ -0.94
VPS9D1-202ENST00000561976 Q6ZTC4 211 aa9.16□□□□□ -0.94
VPS9D1-202ENST00000561976 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.95
VPS9D1-202ENST00000561976 ESRGQ1W209 222 aa9.15□□□□□ -0.95
VPS9D1-202ENST00000561976 BRK1Q8WUW1 75 aa9.15□□□□□ -0.95
VPS9D1-202ENST00000561976 ATRQ13535 2644 aa9.15□□□□□ -0.95
VPS9D1-202ENST00000561976 HECTD1Q9ULT8 2610 aa9.14□□□□□ -0.95
VPS9D1-202ENST00000561976 H3BNG1 76 aa9.14□□□□□ -0.95
VPS9D1-202ENST00000561976 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
VPS9D1-202ENST00000561976 Q8N377 158 aa9.14□□□□□ -0.95
VPS9D1-202ENST00000561976 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
VPS9D1-202ENST00000561976 FP248Q71RG6 208 aaPredicted RBP9.13□□□□□ -0.95
VPS9D1-202ENST00000561976 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
VPS9D1-202ENST00000561976 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
VPS9D1-202ENST00000561976 OCR1Q9BZK8 76 aa9.12□□□□□ -0.95
VPS9D1-202ENST00000561976 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
VPS9D1-202ENST00000561976 PRYO14603 147 aa9.12□□□□□ -0.95
VPS9D1-202ENST00000561976 FUSP35637 526 aaKnown RBP eCLIP9.12□□□□□ -0.95
VPS9D1-202ENST00000561976 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
VPS9D1-202ENST00000561976 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
VPS9D1-202ENST00000561976 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
VPS9D1-202ENST00000561976 TEP1Q99973 2627 aaKnown RBP9.09□□□□□ -0.96
VPS9D1-202ENST00000561976 LINC01556Q5JQF7 62 aa9.08□□□□□ -0.96
VPS9D1-202ENST00000561976 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
VPS9D1-202ENST00000561976 PKD1L1Q8TDX9 2849 aa9.08□□□□□ -0.96
VPS9D1-202ENST00000561976 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 TRRAPQ9Y4A5 3859 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 ETDCA0A1B0GVM5 59 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 Q6ZRX8 168 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 OXLD1Q5BKU9 147 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
VPS9D1-202ENST00000561976 A0A1W2PNM2 257 aa9.06□□□□□ -0.96
VPS9D1-202ENST00000561976 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
VPS9D1-202ENST00000561976 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
VPS9D1-202ENST00000561976 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
VPS9D1-202ENST00000561976 Q9BRP9 147 aa9.05□□□□□ -0.96
VPS9D1-202ENST00000561976 OTOGQ6ZRI0 2925 aa9.05□□□□□ -0.96
VPS9D1-202ENST00000561976 NSD1Q96L73 2696 aaPredicted RBP9.05□□□□□ -0.96
VPS9D1-202ENST00000561976 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
VPS9D1-202ENST00000561976 FAM229BQ4G0N7 80 aa9.03□□□□□ -0.96
VPS9D1-202ENST00000561976 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
VPS9D1-202ENST00000561976 A0A1B0GW54 56 aa9.02□□□□□ -0.97
VPS9D1-202ENST00000561976 Q8NBF4 154 aa9.02□□□□□ -0.97
VPS9D1-202ENST00000561976 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
VPS9D1-202ENST00000561976 C11orf45Q8TAV5 145 aa9.01□□□□□ -0.97
VPS9D1-202ENST00000561976 KRTAP4-16G5E9R7 235 aaPredicted RBP9.01□□□□□ -0.97
VPS9D1-202ENST00000561976 TLX1NBP0CAT3 122 aa9.01□□□□□ -0.97
VPS9D1-202ENST00000561976 UBE2BP63146 152 aa9.01□□□□□ -0.97
VPS9D1-202ENST00000561976 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
VPS9D1-202ENST00000561976 TNP2Q05952 138 aa9□□□□□ -0.97
VPS9D1-202ENST00000561976 DNAH10OSP0CZ25 163 aa8.99□□□□□ -0.97
VPS9D1-202ENST00000561976 SPRR1AP35321 89 aa8.98□□□□□ -0.97
VPS9D1-202ENST00000561976 CASC10Q5T4H9 136 aa8.98□□□□□ -0.97
VPS9D1-202ENST00000561976 K7EQZ3 153 aa8.97□□□□□ -0.97
VPS9D1-202ENST00000561976 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
VPS9D1-202ENST00000561976 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
VPS9D1-202ENST00000561976 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.97
VPS9D1-202ENST00000561976 DSCR10P59022 87 aa8.96□□□□□ -0.97
VPS9D1-202ENST00000561976 SPRR4Q96PI1 79 aa8.96□□□□□ -0.97
VPS9D1-202ENST00000561976 KRTAP7-1Q8IUC3 87 aa8.95□□□□□ -0.98
VPS9D1-202ENST00000561976 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
VPS9D1-202ENST00000561976 LCE6AA0A183 80 aa8.92□□□□□ -0.98
VPS9D1-202ENST00000561976 A0A1W2PNN7 141 aa8.92□□□□□ -0.98
VPS9D1-202ENST00000561976 LINC00588Q9Y4M8 146 aa8.92□□□□□ -0.98
VPS9D1-202ENST00000561976 REG3GQ6UW15 175 aa8.92□□□□□ -0.98
VPS9D1-202ENST00000561976 LINC00476Q8WZB0 136 aa8.92□□□□□ -0.98
VPS9D1-202ENST00000561976 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
VPS9D1-202ENST00000561976 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
VPS9D1-202ENST00000561976 DEFB116Q30KQ4 102 aa8.9□□□□□ -0.98
VPS9D1-202ENST00000561976 F8P00451 2351 aa8.9□□□□□ -0.98
VPS9D1-202ENST00000561976 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
VPS9D1-202ENST00000561976 PSCAO43653 123 aa8.9□□□□□ -0.99
VPS9D1-202ENST00000561976 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.89□□□□□ -0.99
VPS9D1-202ENST00000561976 hDV103S1A0JD37 113 aa8.89□□□□□ -0.99
VPS9D1-202ENST00000561976 C1orf64Q8NEQ6 169 aa8.88□□□□□ -0.99
VPS9D1-202ENST00000561976 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
VPS9D1-202ENST00000561976 PRR4Q16378 134 aa8.87□□□□□ -0.99
VPS9D1-202ENST00000561976 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
VPS9D1-202ENST00000561976 WFDC13Q8IUB5 93 aa8.87□□□□□ -0.99
VPS9D1-202ENST00000561976 FLNBO75369 2602 aaKnown RBP8.86□□□□□ -0.99
VPS9D1-202ENST00000561976 BAHCC1Q9P281 2608 aa8.86□□□□□ -0.99
VPS9D1-202ENST00000561976 PRLHP81277 87 aa8.86□□□□□ -0.99
VPS9D1-202ENST00000561976 A0A087WSZ3 146 aa8.84□□□□□ -0.99
VPS9D1-202ENST00000561976 IGKV2-24A0A0C4DH68 120 aa8.84□□□□□ -0.99
VPS9D1-202ENST00000561976 PRB2P02812 416 aaPredicted RBP8.81□□□□□ -1
VPS9D1-202ENST00000561976 MP68P56378 58 aa8.81□□□□□ -1
VPS9D1-202ENST00000561976 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
VPS9D1-202ENST00000561976 A0A096LNI7 61 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms