RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 FABP4P15090 132 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BOP23527 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BBP33778 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BDP58876 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BCP62807 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST2H2BEQ16778 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BHQ93079 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BNQ99877 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BMQ99879 126 aa6.32□□□□□ -1.4
NSMCE1-202ENST00000561960 TRAV9-1A0A075B6T8 112 aa6.31□□□□□ -1.4
NSMCE1-202ENST00000561960 NPC2P61916 151 aa6.31□□□□□ -1.4
NSMCE1-202ENST00000561960 USH2AO75445 5202 aa6.31□□□□□ -1.4
NSMCE1-202ENST00000561960 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 H0Y8G0 127 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 H7C2G1 150 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 TRGC2P03986 189 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 LINC00614P0C842 121 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 TSPEAR-AS2P59090 65 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 PRO1933Q9H354 126 aa6.3□□□□□ -1.4
NSMCE1-202ENST00000561960 JOSD1Q15040 202 aaPredicted RBP6.29□□□□□ -1.4
NSMCE1-202ENST00000561960 COX6B2Q6YFQ2 88 aa6.29□□□□□ -1.4
NSMCE1-202ENST00000561960 Q6ZRX8 168 aa6.29□□□□□ -1.4
NSMCE1-202ENST00000561960 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
NSMCE1-202ENST00000561960 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
NSMCE1-202ENST00000561960 TRAPPC1Q9Y5R8 145 aa6.27□□□□□ -1.41
NSMCE1-202ENST00000561960 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 IGLV6-57P01721 117 aa6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 COX19Q49B96 90 aa6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 KRTAP3-3Q9BYR6 98 aa6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 KRTAP3-2Q9BYR7 98 aa6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 CBY1Q9Y3M2 126 aa6.26□□□□□ -1.41
NSMCE1-202ENST00000561960 A0A0G2JQZ4 141 aa6.25□□□□□ -1.41
NSMCE1-202ENST00000561960 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
NSMCE1-202ENST00000561960 M0R143 59 aa6.25□□□□□ -1.41
NSMCE1-202ENST00000561960 EIF4EBP3O60516 100 aaPredicted RBP6.25□□□□□ -1.41
NSMCE1-202ENST00000561960 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
NSMCE1-202ENST00000561960 TRAV23DV6A0A075B6W5 121 aa6.24□□□□□ -1.41
NSMCE1-202ENST00000561960 IFI27L1Q96BM0 104 aa6.24□□□□□ -1.41
NSMCE1-202ENST00000561960 MYMXA0A1B0GTQ4 84 aa6.23□□□□□ -1.41
NSMCE1-202ENST00000561960 HERV-K104P63124 156 aa6.23□□□□□ -1.41
NSMCE1-202ENST00000561960 Q1RN00 199 aa6.22□□□□□ -1.41
NSMCE1-202ENST00000561960 SOSTDC1Q6X4U4 206 aa6.22□□□□□ -1.41
NSMCE1-202ENST00000561960 SPANXB1Q9NS25 103 aaPredicted RBP6.22□□□□□ -1.41
NSMCE1-202ENST00000561960 ZNF73O43830 326 aaPredicted RBP6.21□□□□□ -1.42
NSMCE1-202ENST00000561960 Q6Q795 121 aa6.21□□□□□ -1.42
NSMCE1-202ENST00000561960 DEFB105AQ8NG35 78 aa6.21□□□□□ -1.42
NSMCE1-202ENST00000561960 PMCHL2Q9BQD1 86 aa6.21□□□□□ -1.42
NSMCE1-202ENST00000561960 LIMD2Q9BT23 127 aa6.21□□□□□ -1.42
NSMCE1-202ENST00000561960 MAP1LC3CQ9BXW4 147 aa6.21□□□□□ -1.42
NSMCE1-202ENST00000561960 TRAV12-1A0A0B4J245 112 aa6.2□□□□□ -1.42
NSMCE1-202ENST00000561960 SCGB1D1O95968 90 aa6.2□□□□□ -1.42
NSMCE1-202ENST00000561960 MIEN1Q9BRT3 115 aa6.2□□□□□ -1.42
NSMCE1-202ENST00000561960 SNHG12Q9BXW3 62 aa6.2□□□□□ -1.42
NSMCE1-202ENST00000561960 TRBV10-2A0A0K0K1G8 114 aa6.19□□□□□ -1.42
NSMCE1-202ENST00000561960 DLEU1O43261 78 aa6.19□□□□□ -1.42
NSMCE1-202ENST00000561960 LEPROTO15243 131 aa6.18□□□□□ -1.42
NSMCE1-202ENST00000561960 ADAMTSL4-AS1Q5T5F5 129 aa6.18□□□□□ -1.42
NSMCE1-202ENST00000561960 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
NSMCE1-202ENST00000561960 OR13C6PQ8NH95 151 aa6.17□□□□□ -1.42
NSMCE1-202ENST00000561960 FCGBPQ9Y6R7 5405 aaPredicted RBP6.16□□□□□ -1.42
NSMCE1-202ENST00000561960 LOC107984156A0A0G2JMH3 177 aa6.16□□□□□ -1.42
NSMCE1-202ENST00000561960 J3QQQ9 107 aa6.16□□□□□ -1.42
NSMCE1-202ENST00000561960 ARL17AQ8IVW1 177 aa6.16□□□□□ -1.42
NSMCE1-202ENST00000561960 COL5A1-AS1Q5SY13 56 aa6.15□□□□□ -1.42
NSMCE1-202ENST00000561960 C1orf195Q5TG92 126 aa6.15□□□□□ -1.42
NSMCE1-202ENST00000561960 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
NSMCE1-202ENST00000561960 VAMP8Q9BV40 100 aa6.14□□□□□ -1.43
NSMCE1-202ENST00000561960 LAMTOR3Q9UHA4 124 aa6.14□□□□□ -1.43
NSMCE1-202ENST00000561960 PCP4P48539 62 aa6.13□□□□□ -1.43
NSMCE1-202ENST00000561960 CHCHD1Q96BP2 118 aaKnown RBP6.13□□□□□ -1.43
NSMCE1-202ENST00000561960 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
NSMCE1-202ENST00000561960 HSBP1O75506 76 aa6.12□□□□□ -1.43
NSMCE1-202ENST00000561960 NDUFC2O95298 119 aa6.12□□□□□ -1.43
NSMCE1-202ENST00000561960 SPRR1BP22528 89 aa6.12□□□□□ -1.43
NSMCE1-202ENST00000561960 TAL2Q16559 108 aa6.12□□□□□ -1.43
NSMCE1-202ENST00000561960 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
NSMCE1-202ENST00000561960 HINT1P49773 126 aaPredicted RBP6.11□□□□□ -1.43
NSMCE1-202ENST00000561960 BATFQ16520 125 aa6.1□□□□□ -1.43
NSMCE1-202ENST00000561960 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
NSMCE1-202ENST00000561960 DPM2O94777 84 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 COX7BP24311 80 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 LINC00310P59036 64 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 HERVK_113P61574 105 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 SLC25A34Q6PIV7 304 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 SMIM29Q86T20 159 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 DHRS4-AS1Q9P1J3 65 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 UQCR10Q9UDW1 63 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 PAM16Q9Y3D7 125 aa6.09□□□□□ -1.43
NSMCE1-202ENST00000561960 C20orf202A1L168 122 aa6.08□□□□□ -1.44
NSMCE1-202ENST00000561960 SERF1AO75920 110 aa6.08□□□□□ -1.44
NSMCE1-202ENST00000561960 LEPROTL1O95214 131 aa6.08□□□□□ -1.44
NSMCE1-202ENST00000561960 C6orf99Q4VX62 202 aa6.08□□□□□ -1.44
NSMCE1-202ENST00000561960 IGKCP01834 107 aa6.07□□□□□ -1.44
NSMCE1-202ENST00000561960 PLNP26678 52 aa6.07□□□□□ -1.44
NSMCE1-202ENST00000561960 NMUP48645 174 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms