RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 S100A2P29034 98 aa8.16□□□□□ -1.1
SPG7-205ENST00000561945 AKR1D1P51857 326 aa8.16□□□□□ -1.1
SPG7-205ENST00000561945 MIR7-3HGQ8N6C7 128 aa8.16□□□□□ -1.1
SPG7-205ENST00000561945 KRTAP4-1Q9BYQ7 146 aa8.16□□□□□ -1.1
SPG7-205ENST00000561945 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
SPG7-205ENST00000561945 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.1
SPG7-205ENST00000561945 ETDCA0A1B0GVM5 59 aa8.14□□□□□ -1.11
SPG7-205ENST00000561945 B5MCH6 92 aa8.14□□□□□ -1.11
SPG7-205ENST00000561945 NCR3O14931 201 aa8.14□□□□□ -1.11
SPG7-205ENST00000561945 SSBP3-AS1Q7Z2R9 100 aa8.14□□□□□ -1.11
SPG7-205ENST00000561945 Q8N377 158 aa8.14□□□□□ -1.11
SPG7-205ENST00000561945 TRBV10-2A0A0K0K1G8 114 aa8.12□□□□□ -1.11
SPG7-205ENST00000561945 SEC61BP60468 96 aaKnown RBP8.12□□□□□ -1.11
SPG7-205ENST00000561945 LCE2DQ5TA82 110 aaPredicted RBP8.11□□□□□ -1.11
SPG7-205ENST00000561945 HIST3H2BBQ8N257 126 aa8.11□□□□□ -1.11
SPG7-205ENST00000561945 ERC2-IT1O76042 136 aa8.1□□□□□ -1.11
SPG7-205ENST00000561945 LINC01547P58512 204 aaPredicted RBP8.1□□□□□ -1.11
SPG7-205ENST00000561945 Q6ZRX8 168 aa8.1□□□□□ -1.11
SPG7-205ENST00000561945 Q9BRP9 147 aa8.1□□□□□ -1.11
SPG7-205ENST00000561945 MIEN1Q9BRT3 115 aa8.1□□□□□ -1.11
SPG7-205ENST00000561945 A0A0J9YXY3 114 aa8.09□□□□□ -1.11
SPG7-205ENST00000561945 S100A12P80511 92 aa8.09□□□□□ -1.11
SPG7-205ENST00000561945 XP32Q5T750 250 aa8.09□□□□□ -1.11
SPG7-205ENST00000561945 GAGE2AQ6NT46 116 aa8.09□□□□□ -1.11
SPG7-205ENST00000561945 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
SPG7-205ENST00000561945 SLC25A20O43772 301 aa8.08□□□□□ -1.12
SPG7-205ENST00000561945 MOBPQ13875 183 aa8.08□□□□□ -1.12
SPG7-205ENST00000561945 ZNF815PA8K554 130 aa8.07□□□□□ -1.12
SPG7-205ENST00000561945 IGLV6-57P01721 117 aa8.07□□□□□ -1.12
SPG7-205ENST00000561945 DDTP30046 118 aa8.07□□□□□ -1.12
SPG7-205ENST00000561945 SNRPEP62304 92 aaKnown RBP8.07□□□□□ -1.12
SPG7-205ENST00000561945 NDUFC2O95298 119 aa8.06□□□□□ -1.12
SPG7-205ENST00000561945 SPANXB1Q9NS25 103 aaPredicted RBP8.06□□□□□ -1.12
SPG7-205ENST00000561945 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
SPG7-205ENST00000561945 TIMM17BO60830 172 aa8.05□□□□□ -1.12
SPG7-205ENST00000561945 ATOH7Q8N100 152 aa8.05□□□□□ -1.12
SPG7-205ENST00000561945 C5orf52A6NGY3 159 aa8.04□□□□□ -1.12
SPG7-205ENST00000561945 LCE2CQ5TA81 110 aa8.04□□□□□ -1.12
SPG7-205ENST00000561945 HSBP1L1C9JCN9 74 aa8.03□□□□□ -1.12
SPG7-205ENST00000561945 ADAMTSL4-AS1Q5T5F5 129 aa8.03□□□□□ -1.12
SPG7-205ENST00000561945 ANKRD39Q53RE8 183 aa8.02□□□□□ -1.13
SPG7-205ENST00000561945 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
SPG7-205ENST00000561945 NPC2P61916 151 aa8.01□□□□□ -1.13
SPG7-205ENST00000561945 JOSD1Q15040 202 aaPredicted RBP8.01□□□□□ -1.13
SPG7-205ENST00000561945 KRTAP19-2Q3LHN2 52 aa8.01□□□□□ -1.13
SPG7-205ENST00000561945 TTTY13Q9BZ97 58 aa8.01□□□□□ -1.13
SPG7-205ENST00000561945 TRAV23DV6A0A075B6W5 121 aa8□□□□□ -1.13
SPG7-205ENST00000561945 SCGB1D1O95968 90 aa8□□□□□ -1.13
SPG7-205ENST00000561945 S100A7L2Q5SY68 101 aa8□□□□□ -1.13
SPG7-205ENST00000561945 LINC00308Q8TCZ7 52 aa8□□□□□ -1.13
SPG7-205ENST00000561945 COPS9Q8WXC6 57 aa8□□□□□ -1.13
SPG7-205ENST00000561945 SPRR1BP22528 89 aa7.99□□□□□ -1.13
SPG7-205ENST00000561945 LITAFQ99732 161 aa7.99□□□□□ -1.13
SPG7-205ENST00000561945 CBY1Q9Y3M2 126 aa7.99□□□□□ -1.13
SPG7-205ENST00000561945 ZNF73O43830 326 aaPredicted RBP7.98□□□□□ -1.13
SPG7-205ENST00000561945 SOSTDC1Q6X4U4 206 aa7.98□□□□□ -1.13
SPG7-205ENST00000561945 SPANXCQ9NY87 97 aa7.98□□□□□ -1.13
SPG7-205ENST00000561945 EIF4EBP3O60516 100 aaPredicted RBP7.97□□□□□ -1.13
SPG7-205ENST00000561945 Q6ZVH6 145 aa7.97□□□□□ -1.13
SPG7-205ENST00000561945 PCP2Q8IVA1 136 aa7.97□□□□□ -1.13
SPG7-205ENST00000561945 SPANXDQ9BXN6 97 aa7.97□□□□□ -1.13
SPG7-205ENST00000561945 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
SPG7-205ENST00000561945 IFITM1P13164 125 aa7.96□□□□□ -1.14
SPG7-205ENST00000561945 C9orf153Q5TBE3 101 aa7.96□□□□□ -1.14
SPG7-205ENST00000561945 LINC00518Q8N0U6 118 aa7.96□□□□□ -1.14
SPG7-205ENST00000561945 ST20-AS1Q8NBB2 130 aa7.96□□□□□ -1.14
SPG7-205ENST00000561945 OR13C6PQ8NH95 151 aa7.94□□□□□ -1.14
SPG7-205ENST00000561945 HINT1P49773 126 aaPredicted RBP7.93□□□□□ -1.14
SPG7-205ENST00000561945 MT1HP80294 61 aa7.92□□□□□ -1.14
SPG7-205ENST00000561945 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
SPG7-205ENST00000561945 MUSTN1Q8IVN3 82 aa7.91□□□□□ -1.14
SPG7-205ENST00000561945 SLC25A34Q6PIV7 304 aa7.9□□□□□ -1.14
SPG7-205ENST00000561945 DHRS4-AS1Q9P1J3 65 aa7.9□□□□□ -1.14
SPG7-205ENST00000561945 CD164Q04900 197 aa7.89□□□□□ -1.15
SPG7-205ENST00000561945 PCOTHQ58A44 107 aa7.88□□□□□ -1.15
SPG7-205ENST00000561945 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
SPG7-205ENST00000561945 ELOF1P60002 83 aaKnown RBP7.87□□□□□ -1.15
SPG7-205ENST00000561945 Q5XG85 94 aa7.87□□□□□ -1.15
SPG7-205ENST00000561945 A6NDN8 102 aa7.86□□□□□ -1.15
SPG7-205ENST00000561945 COX8AP10176 69 aa7.86□□□□□ -1.15
SPG7-205ENST00000561945 VAMP8Q9BV40 100 aa7.86□□□□□ -1.15
SPG7-205ENST00000561945 LAMTOR3Q9UHA4 124 aa7.86□□□□□ -1.15
SPG7-205ENST00000561945 FLGP20930 4061 aaPredicted RBP7.85□□□□□ -1.15
SPG7-205ENST00000561945 IGLV8-61A0A075B6I0 122 aa7.85□□□□□ -1.15
SPG7-205ENST00000561945 TRAV13-2A0A0B4J235 113 aa7.85□□□□□ -1.15
SPG7-205ENST00000561945 DLEU1O43261 78 aa7.85□□□□□ -1.15
SPG7-205ENST00000561945 TMA7Q9Y2S6 64 aaKnown RBP7.85□□□□□ -1.15
SPG7-205ENST00000561945 LORP23490 312 aaPredicted RBP7.84□□□□□ -1.15
SPG7-205ENST00000561945 SPATA45Q537H7 98 aa7.84□□□□□ -1.15
SPG7-205ENST00000561945 PAM16Q9Y3D7 125 aa7.84□□□□□ -1.15
SPG7-205ENST00000561945 HIST1H4GQ99525 98 aa7.83□□□□□ -1.16
SPG7-205ENST00000561945 TRBV7-6A0A0J9YX20 115 aa7.82□□□□□ -1.16
SPG7-205ENST00000561945 C9orf92A6NGG3 77 aa7.82□□□□□ -1.16
SPG7-205ENST00000561945 COX7BP24311 80 aa7.82□□□□□ -1.16
SPG7-205ENST00000561945 HRCT1Q6UXD1 115 aa7.82□□□□□ -1.16
SPG7-205ENST00000561945 C14orf144Q96I85 54 aa7.82□□□□□ -1.16
SPG7-205ENST00000561945 C6orf99Q4VX62 202 aa7.81□□□□□ -1.16
SPG7-205ENST00000561945 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
SPG7-205ENST00000561945 PRO1933Q9H354 126 aa7.81□□□□□ -1.16
SPG7-205ENST00000561945 TEX49A0A1B0GTD5 131 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms