RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 HIST1H2BKO60814 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BJP06899 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BOP23527 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BBP33778 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HINT1P49773 126 aaPredicted RBP13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BDP58876 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 RPS29P62273 56 aaKnown RBP13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BCP62807 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST2H2BEQ16778 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BHQ93079 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BNQ99877 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 HIST1H2BMQ99879 126 aa13.29□□□□□ -0.28
TMEM170A-202ENST00000561878 EIF4EBP3O60516 100 aaPredicted RBP13.28□□□□□ -0.28
TMEM170A-202ENST00000561878 TIMM17BO60830 172 aa13.26□□□□□ -0.29
TMEM170A-202ENST00000561878 LINC01545Q5VT33 79 aa13.26□□□□□ -0.29
TMEM170A-202ENST00000561878 PET117Q6UWS5 81 aa13.26□□□□□ -0.29
TMEM170A-202ENST00000561878 SPANXCQ9NY87 97 aa13.26□□□□□ -0.29
TMEM170A-202ENST00000561878 C5orf52A6NGY3 159 aa13.24□□□□□ -0.29
TMEM170A-202ENST00000561878 KRTAP13-3Q3SY46 172 aa13.24□□□□□ -0.29
TMEM170A-202ENST00000561878 LINC00308Q8TCZ7 52 aa13.24□□□□□ -0.29
TMEM170A-202ENST00000561878 C9orf153Q5TBE3 101 aa13.23□□□□□ -0.29
TMEM170A-202ENST00000561878 OR13C6PQ8NH95 151 aa13.23□□□□□ -0.29
TMEM170A-202ENST00000561878 LITAFQ99732 161 aa13.23□□□□□ -0.29
TMEM170A-202ENST00000561878 MUC17Q685J3 4493 aa13.23□□□□□ -0.29
TMEM170A-202ENST00000561878 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
TMEM170A-202ENST00000561878 Q8N377 158 aa13.21□□□□□ -0.29
TMEM170A-202ENST00000561878 SLC25A20O43772 301 aa13.2□□□□□ -0.3
TMEM170A-202ENST00000561878 ST20-AS1Q8NBB2 130 aa13.18□□□□□ -0.3
TMEM170A-202ENST00000561878 SPANXDQ9BXN6 97 aa13.18□□□□□ -0.3
TMEM170A-202ENST00000561878 DHRS4-AS1Q9P1J3 65 aa13.17□□□□□ -0.3
TMEM170A-202ENST00000561878 C3orf79P0CE67 100 aa13.16□□□□□ -0.3
TMEM170A-202ENST00000561878 LCE2AQ5TA79 106 aaPredicted RBP13.15□□□□□ -0.3
TMEM170A-202ENST00000561878 SLC25A34Q6PIV7 304 aa13.15□□□□□ -0.3
TMEM170A-202ENST00000561878 LINC00518Q8N0U6 118 aa13.15□□□□□ -0.3
TMEM170A-202ENST00000561878 FAT4Q6V0I7 4981 aa13.13□□□□□ -0.31
TMEM170A-202ENST00000561878 KRTDAPP60985 99 aa13.13□□□□□ -0.31
TMEM170A-202ENST00000561878 ASB16-AS1Q495Z4 193 aa13.13□□□□□ -0.31
TMEM170A-202ENST00000561878 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
TMEM170A-202ENST00000561878 C20orf202A1L168 122 aa13.11□□□□□ -0.31
TMEM170A-202ENST00000561878 SPRR1BP22528 89 aa13.11□□□□□ -0.31
TMEM170A-202ENST00000561878 COA6Q5JTJ3 125 aaKnown RBP13.11□□□□□ -0.31
TMEM170A-202ENST00000561878 SEC61BP60468 96 aaKnown RBP13.1□□□□□ -0.31
TMEM170A-202ENST00000561878 SCGB1D4Q6XE38 83 aa13.1□□□□□ -0.31
TMEM170A-202ENST00000561878 COPS9Q8WXC6 57 aa13.1□□□□□ -0.31
TMEM170A-202ENST00000561878 COX7BP24311 80 aa13.09□□□□□ -0.31
TMEM170A-202ENST00000561878 ELOF1P60002 83 aaKnown RBP13.09□□□□□ -0.31
TMEM170A-202ENST00000561878 C6orf99Q4VX62 202 aa13.08□□□□□ -0.32
TMEM170A-202ENST00000561878 LAMTOR3Q9UHA4 124 aa13.08□□□□□ -0.32
TMEM170A-202ENST00000561878 LIMD2Q9BT23 127 aa13.06□□□□□ -0.32
TMEM170A-202ENST00000561878 IFITM1P13164 125 aa13.03□□□□□ -0.32
TMEM170A-202ENST00000561878 AKR1D1P51857 326 aa13.03□□□□□ -0.32
TMEM170A-202ENST00000561878 TRBV7-6A0A0J9YX20 115 aa13.02□□□□□ -0.33
TMEM170A-202ENST00000561878 TAL2Q16559 108 aa13.02□□□□□ -0.33
TMEM170A-202ENST00000561878 ANKRD39Q53RE8 183 aa13.02□□□□□ -0.33
TMEM170A-202ENST00000561878 Q6ZVH6 145 aa13.02□□□□□ -0.33
TMEM170A-202ENST00000561878 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
TMEM170A-202ENST00000561878 XP32Q5T750 250 aa12.99□□□□□ -0.33
TMEM170A-202ENST00000561878 HRCT1Q6UXD1 115 aa12.99□□□□□ -0.33
TMEM170A-202ENST00000561878 DEFB105AQ8NG35 78 aa12.99□□□□□ -0.33
TMEM170A-202ENST00000561878 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
TMEM170A-202ENST00000561878 A6NDN8 102 aa12.98□□□□□ -0.33
TMEM170A-202ENST00000561878 ATOH7Q8N100 152 aa12.98□□□□□ -0.33
TMEM170A-202ENST00000561878 Q1RN00 199 aa12.97□□□□□ -0.33
TMEM170A-202ENST00000561878 KRTAP9-2Q9BYQ4 174 aa12.97□□□□□ -0.33
TMEM170A-202ENST00000561878 CD164Q04900 197 aa12.95□□□□□ -0.34
TMEM170A-202ENST00000561878 PRO1933Q9H354 126 aa12.95□□□□□ -0.34
TMEM170A-202ENST00000561878 PCP2Q8IVA1 136 aa12.94□□□□□ -0.34
TMEM170A-202ENST00000561878 MUSTN1Q8IVN3 82 aa12.94□□□□□ -0.34
TMEM170A-202ENST00000561878 SNRPEP62304 92 aaKnown RBP12.93□□□□□ -0.34
TMEM170A-202ENST00000561878 A4D1N5 150 aa12.92□□□□□ -0.34
TMEM170A-202ENST00000561878 KRTAP4-1Q9BYQ7 146 aa12.92□□□□□ -0.34
TMEM170A-202ENST00000561878 TRAV13-2A0A0B4J235 113 aa12.91□□□□□ -0.34
TMEM170A-202ENST00000561878 LINC01547P58512 204 aaPredicted RBP12.91□□□□□ -0.34
TMEM170A-202ENST00000561878 H7C2G1 150 aa12.9□□□□□ -0.34
TMEM170A-202ENST00000561878 NHP2Q9NX24 153 aaKnown RBP12.9□□□□□ -0.34
TMEM170A-202ENST00000561878 IGLV5-48A0A075B6I7 105 aa12.89□□□□□ -0.35
TMEM170A-202ENST00000561878 SMIM29Q86T20 159 aa12.87□□□□□ -0.35
TMEM170A-202ENST00000561878 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
TMEM170A-202ENST00000561878 Q5XG85 94 aa12.83□□□□□ -0.36
TMEM170A-202ENST00000561878 C9orf92A6NGG3 77 aa12.82□□□□□ -0.36
TMEM170A-202ENST00000561878 HSBP1L1C9JCN9 74 aa12.82□□□□□ -0.36
TMEM170A-202ENST00000561878 S100A2P29034 98 aa12.82□□□□□ -0.36
TMEM170A-202ENST00000561878 VAMP3Q15836 100 aa12.81□□□□□ -0.36
TMEM170A-202ENST00000561878 HIST3H2BBQ8N257 126 aa12.79□□□□□ -0.36
TMEM170A-202ENST00000561878 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
TMEM170A-202ENST00000561878 F8WEM9 126 aa12.75□□□□□ -0.37
TMEM170A-202ENST00000561878 PCOTHQ58A44 107 aa12.75□□□□□ -0.37
TMEM170A-202ENST00000561878 C1orf195Q5TG92 126 aa12.75□□□□□ -0.37
TMEM170A-202ENST00000561878 A0A0G2JQZ4 141 aa12.74□□□□□ -0.37
TMEM170A-202ENST00000561878 TCL1BO95988 128 aa12.72□□□□□ -0.37
TMEM170A-202ENST00000561878 LINC00575Q6W349 94 aa12.72□□□□□ -0.37
TMEM170A-202ENST00000561878 IGLV8-61A0A075B6I0 122 aa12.71□□□□□ -0.37
TMEM170A-202ENST00000561878 S100A6P06703 90 aa12.7□□□□□ -0.38
TMEM170A-202ENST00000561878 hADV29S1A0JD25 119 aa12.69□□□□□ -0.38
TMEM170A-202ENST00000561878 Q6ZQY7 126 aa12.68□□□□□ -0.38
TMEM170A-202ENST00000561878 S100A1P23297 94 aa12.65□□□□□ -0.38
TMEM170A-202ENST00000561878 Q6JHZ5 121 aa12.65□□□□□ -0.38
TMEM170A-202ENST00000561878 HIST1H4GQ99525 98 aa12.63□□□□□ -0.39
TMEM170A-202ENST00000561878 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms