RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 JOSD1Q15040 202 aaPredicted RBP13.94□□□□□ -0.18
SMPD3-202ENST00000561749 TNXBP22105 4242 aa13.93□□□□□ -0.18
SMPD3-202ENST00000561749 Q6ZVH6 145 aa13.93□□□□□ -0.18
SMPD3-202ENST00000561749 PAM16Q9Y3D7 125 aa13.93□□□□□ -0.18
SMPD3-202ENST00000561749 COPS9Q8WXC6 57 aa13.92□□□□□ -0.18
SMPD3-202ENST00000561749 B5MCH6 92 aa13.91□□□□□ -0.18
SMPD3-202ENST00000561749 COX8AP10176 69 aa13.91□□□□□ -0.18
SMPD3-202ENST00000561749 SPATA45Q537H7 98 aa13.9□□□□□ -0.18
SMPD3-202ENST00000561749 LINC00518Q8N0U6 118 aa13.9□□□□□ -0.18
SMPD3-202ENST00000561749 VAMP8Q9BV40 100 aa13.9□□□□□ -0.18
SMPD3-202ENST00000561749 A0A087X002 238 aa13.89□□□□□ -0.19
SMPD3-202ENST00000561749 ZNF73O43830 326 aaPredicted RBP13.89□□□□□ -0.19
SMPD3-202ENST00000561749 SMCR5Q8TEV8 140 aa13.88□□□□□ -0.19
SMPD3-202ENST00000561749 C14orf144Q96I85 54 aa13.88□□□□□ -0.19
SMPD3-202ENST00000561749 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
SMPD3-202ENST00000561749 PPDPFQ9H3Y8 114 aa13.87□□□□□ -0.19
SMPD3-202ENST00000561749 CRYGAP11844 174 aa13.86□□□□□ -0.19
SMPD3-202ENST00000561749 PYY3Q5JQD4 70 aa13.85□□□□□ -0.19
SMPD3-202ENST00000561749 Q6ZRX8 168 aa13.85□□□□□ -0.19
SMPD3-202ENST00000561749 SPRR4Q96PI1 79 aa13.84□□□□□ -0.19
SMPD3-202ENST00000561749 Q9BRP9 147 aa13.84□□□□□ -0.19
SMPD3-202ENST00000561749 CBY1Q9Y3M2 126 aa13.84□□□□□ -0.19
SMPD3-202ENST00000561749 A6NDN8 102 aa13.83□□□□□ -0.2
SMPD3-202ENST00000561749 ERC2-IT1O76042 136 aa13.83□□□□□ -0.2
SMPD3-202ENST00000561749 DLEU1O43261 78 aa13.82□□□□□ -0.2
SMPD3-202ENST00000561749 KRTAP13-2Q52LG2 175 aa13.82□□□□□ -0.2
SMPD3-202ENST00000561749 FAM229BQ4G0N7 80 aa13.81□□□□□ -0.2
SMPD3-202ENST00000561749 TYMSOSQ8TAI1 123 aa13.8□□□□□ -0.2
SMPD3-202ENST00000561749 HIST1H4GQ99525 98 aa13.8□□□□□ -0.2
SMPD3-202ENST00000561749 ZNF706Q9Y5V0 76 aaPredicted RBP13.8□□□□□ -0.2
SMPD3-202ENST00000561749 A4D1N5 150 aa13.79□□□□□ -0.2
SMPD3-202ENST00000561749 HINT1P49773 126 aaPredicted RBP13.79□□□□□ -0.2
SMPD3-202ENST00000561749 C6orf99Q4VX62 202 aa13.78□□□□□ -0.2
SMPD3-202ENST00000561749 SLC25A34Q6PIV7 304 aa13.78□□□□□ -0.2
SMPD3-202ENST00000561749 TRAV13-2A0A0B4J235 113 aa13.75□□□□□ -0.21
SMPD3-202ENST00000561749 GAGE2AQ6NT46 116 aa13.75□□□□□ -0.21
SMPD3-202ENST00000561749 C3orf22Q8N5N4 141 aa13.75□□□□□ -0.21
SMPD3-202ENST00000561749 COX7BP24311 80 aa13.74□□□□□ -0.21
SMPD3-202ENST00000561749 C2orf91Q6ZV80 131 aa13.74□□□□□ -0.21
SMPD3-202ENST00000561749 C12orf57Q99622 126 aa13.74□□□□□ -0.21
SMPD3-202ENST00000561749 HIGD1BQ9P298 99 aa13.72□□□□□ -0.21
SMPD3-202ENST00000561749 ELOF1P60002 83 aaKnown RBP13.71□□□□□ -0.21
SMPD3-202ENST00000561749 ST20-AS1Q8NBB2 130 aa13.71□□□□□ -0.21
SMPD3-202ENST00000561749 SMIM11BQ8TCY0 68 aa13.7□□□□□ -0.22
SMPD3-202ENST00000561749 TSPAN13O95857 204 aa13.68□□□□□ -0.22
SMPD3-202ENST00000561749 LINC00483Q53H64 154 aa13.68□□□□□ -0.22
SMPD3-202ENST00000561749 DHRS4-AS1Q9P1J3 65 aa13.67□□□□□ -0.22
SMPD3-202ENST00000561749 HMCN2Q8NDA2 5059 aa13.65□□□□□ -0.22
SMPD3-202ENST00000561749 TRBV7-6A0A0J9YX20 115 aa13.64□□□□□ -0.23
SMPD3-202ENST00000561749 A0A1B0GWB2 263 aa13.64□□□□□ -0.23
SMPD3-202ENST00000561749 LINC00304Q8N9R0 145 aa13.64□□□□□ -0.23
SMPD3-202ENST00000561749 IGLV9-49A0A0B4J1Y8 123 aa13.62□□□□□ -0.23
SMPD3-202ENST00000561749 CFC1BP0CG36 223 aa13.6□□□□□ -0.23
SMPD3-202ENST00000561749 CFC1P0CG37 223 aa13.6□□□□□ -0.23
SMPD3-202ENST00000561749 TAL2Q16559 108 aa13.6□□□□□ -0.23
SMPD3-202ENST00000561749 CEND1Q8N111 149 aa13.6□□□□□ -0.23
SMPD3-202ENST00000561749 MOBPQ13875 183 aa13.59□□□□□ -0.23
SMPD3-202ENST00000561749 H7C2G1 150 aa13.58□□□□□ -0.24
SMPD3-202ENST00000561749 Q8NBF4 154 aa13.58□□□□□ -0.24
SMPD3-202ENST00000561749 RAB37Q96AX2 223 aa13.57□□□□□ -0.24
SMPD3-202ENST00000561749 DEFB105AQ8NG35 78 aa13.56□□□□□ -0.24
SMPD3-202ENST00000561749 FXYD2P54710 66 aa13.55□□□□□ -0.24
SMPD3-202ENST00000561749 VAMP3Q15836 100 aa13.55□□□□□ -0.24
SMPD3-202ENST00000561749 UQCR10Q9UDW1 63 aa13.55□□□□□ -0.24
SMPD3-202ENST00000561749 C9orf153Q5TBE3 101 aa13.54□□□□□ -0.24
SMPD3-202ENST00000561749 A0A0B4J2C4 111 aa13.53□□□□□ -0.24
SMPD3-202ENST00000561749 SPRR1BP22528 89 aa13.53□□□□□ -0.24
SMPD3-202ENST00000561749 HSD52Q0P140 79 aa13.52□□□□□ -0.25
SMPD3-202ENST00000561749 TMEM238LA0A1B0GVL6 79 aa13.5□□□□□ -0.25
SMPD3-202ENST00000561749 A6NJY4 79 aa13.5□□□□□ -0.25
SMPD3-202ENST00000561749 PRR4Q16378 134 aa13.5□□□□□ -0.25
SMPD3-202ENST00000561749 LINC00575Q6W349 94 aa13.5□□□□□ -0.25
SMPD3-202ENST00000561749 NHP2Q9NX24 153 aaKnown RBP13.5□□□□□ -0.25
SMPD3-202ENST00000561749 SLC25A20O43772 301 aa13.49□□□□□ -0.25
SMPD3-202ENST00000561749 C4orf48Q5BLP8 95 aa13.49□□□□□ -0.25
SMPD3-202ENST00000561749 PRO1933Q9H354 126 aa13.49□□□□□ -0.25
SMPD3-202ENST00000561749 Q1RN00 199 aa13.48□□□□□ -0.25
SMPD3-202ENST00000561749 SSBP3-AS1Q7Z2R9 100 aa13.48□□□□□ -0.25
SMPD3-202ENST00000561749 RETNLBQ9BQ08 111 aa13.48□□□□□ -0.25
SMPD3-202ENST00000561749 TEX49A0A1B0GTD5 131 aa13.47□□□□□ -0.25
SMPD3-202ENST00000561749 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
SMPD3-202ENST00000561749 SPAG11AQ6PDA7 123 aa13.47□□□□□ -0.25
SMPD3-202ENST00000561749 LAMTOR3Q9UHA4 124 aa13.47□□□□□ -0.25
SMPD3-202ENST00000561749 BVES-AS1Q5T3Y7 98 aa13.46□□□□□ -0.25
SMPD3-202ENST00000561749 PRO1854Q9UHT4 67 aa13.45□□□□□ -0.26
SMPD3-202ENST00000561749 IGLV5-48A0A075B6I7 105 aa13.44□□□□□ -0.26
SMPD3-202ENST00000561749 hADV29S1A0JD25 119 aa13.44□□□□□ -0.26
SMPD3-202ENST00000561749 SMIM6P0DI80 62 aa13.44□□□□□ -0.26
SMPD3-202ENST00000561749 K7ERJ3 54 aa13.41□□□□□ -0.26
SMPD3-202ENST00000561749 Q6ZQY7 126 aa13.41□□□□□ -0.26
SMPD3-202ENST00000561749 SMIM29Q86T20 159 aa13.41□□□□□ -0.26
SMPD3-202ENST00000561749 Q8N377 158 aa13.41□□□□□ -0.26
SMPD3-202ENST00000561749 LOC105371267A0A1B0GV96 52 aa13.4□□□□□ -0.26
SMPD3-202ENST00000561749 SPINK1P00995 79 aa13.38□□□□□ -0.27
SMPD3-202ENST00000561749 CTAG1AP78358 180 aa13.38□□□□□ -0.27
SMPD3-202ENST00000561749 HRCT1Q6UXD1 115 aa13.35□□□□□ -0.27
SMPD3-202ENST00000561749 FAM218AQ96MZ4 157 aa13.35□□□□□ -0.27
SMPD3-202ENST00000561749 H0YGX0 51 aa13.33□□□□□ -0.28
SMPD3-202ENST00000561749 TRIAP1O43715 76 aa13.33□□□□□ -0.28
SMPD3-202ENST00000561749 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms