RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 NPC2P61916 151 aa7.69□□□□□ -1.18
USB1-205ENST00000561743 S100A7L2Q5SY68 101 aa7.69□□□□□ -1.18
USB1-205ENST00000561743 GAGE2AQ6NT46 116 aa7.69□□□□□ -1.18
USB1-205ENST00000561743 C4orf48Q5BLP8 95 aa7.68□□□□□ -1.18
USB1-205ENST00000561743 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
USB1-205ENST00000561743 IGLV9-49A0A0B4J1Y8 123 aa7.66□□□□□ -1.18
USB1-205ENST00000561743 A0A0U1RQV1 116 aa7.66□□□□□ -1.18
USB1-205ENST00000561743 MOBPQ13875 183 aa7.66□□□□□ -1.18
USB1-205ENST00000561743 LINC01545Q5VT33 79 aa7.66□□□□□ -1.18
USB1-205ENST00000561743 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
USB1-205ENST00000561743 LITAFQ99732 161 aa7.66□□□□□ -1.18
USB1-205ENST00000561743 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
USB1-205ENST00000561743 SPINK1P00995 79 aa7.65□□□□□ -1.18
USB1-205ENST00000561743 MUC17Q685J3 4493 aa7.65□□□□□ -1.18
USB1-205ENST00000561743 JOSD1Q15040 202 aaPredicted RBP7.63□□□□□ -1.19
USB1-205ENST00000561743 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
USB1-205ENST00000561743 LINC00308Q8TCZ7 52 aa7.63□□□□□ -1.19
USB1-205ENST00000561743 TIMM17BO60830 172 aa7.62□□□□□ -1.19
USB1-205ENST00000561743 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
USB1-205ENST00000561743 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
USB1-205ENST00000561743 SPANXCQ9NY87 97 aa7.62□□□□□ -1.19
USB1-205ENST00000561743 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
USB1-205ENST00000561743 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
USB1-205ENST00000561743 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
USB1-205ENST00000561743 RPS29P62273 56 aaKnown RBP7.61□□□□□ -1.19
USB1-205ENST00000561743 TTTY13Q9BZ97 58 aa7.61□□□□□ -1.19
USB1-205ENST00000561743 Q8N377 158 aa7.6□□□□□ -1.19
USB1-205ENST00000561743 ST20-AS1Q8NBB2 130 aa7.6□□□□□ -1.19
USB1-205ENST00000561743 CBY1Q9Y3M2 126 aa7.59□□□□□ -1.19
USB1-205ENST00000561743 HINT1P49773 126 aaPredicted RBP7.58□□□□□ -1.2
USB1-205ENST00000561743 COA6Q5JTJ3 125 aaKnown RBP7.58□□□□□ -1.2
USB1-205ENST00000561743 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
USB1-205ENST00000561743 C9orf153Q5TBE3 101 aa7.58□□□□□ -1.2
USB1-205ENST00000561743 OR13C6PQ8NH95 151 aa7.58□□□□□ -1.2
USB1-205ENST00000561743 C5orf52A6NGY3 159 aa7.57□□□□□ -1.2
USB1-205ENST00000561743 KRTDAPP60985 99 aa7.57□□□□□ -1.2
USB1-205ENST00000561743 SPANXDQ9BXN6 97 aa7.57□□□□□ -1.2
USB1-205ENST00000561743 SLC25A20O43772 301 aa7.56□□□□□ -1.2
USB1-205ENST00000561743 SPRR1BP22528 89 aa7.54□□□□□ -1.2
USB1-205ENST00000561743 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
USB1-205ENST00000561743 TMA7Q9Y2S6 64 aaKnown RBP7.54□□□□□ -1.2
USB1-205ENST00000561743 ELOF1P60002 83 aaKnown RBP7.53□□□□□ -1.2
USB1-205ENST00000561743 ASB16-AS1Q495Z4 193 aa7.53□□□□□ -1.2
USB1-205ENST00000561743 C6orf99Q4VX62 202 aa7.53□□□□□ -1.2
USB1-205ENST00000561743 ANKRD39Q53RE8 183 aa7.53□□□□□ -1.2
USB1-205ENST00000561743 LINC00518Q8N0U6 118 aa7.53□□□□□ -1.2
USB1-205ENST00000561743 SCGB1D4Q6XE38 83 aa7.52□□□□□ -1.21
USB1-205ENST00000561743 C20orf202A1L168 122 aa7.51□□□□□ -1.21
USB1-205ENST00000561743 COX7BP24311 80 aa7.51□□□□□ -1.21
USB1-205ENST00000561743 ATOH7Q8N100 152 aa7.51□□□□□ -1.21
USB1-205ENST00000561743 SLC25A34Q6PIV7 304 aa7.5□□□□□ -1.21
USB1-205ENST00000561743 IFITM1P13164 125 aa7.48□□□□□ -1.21
USB1-205ENST00000561743 PCP2Q8IVA1 136 aa7.48□□□□□ -1.21
USB1-205ENST00000561743 COPS9Q8WXC6 57 aa7.48□□□□□ -1.21
USB1-205ENST00000561743 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
USB1-205ENST00000561743 LAMTOR3Q9UHA4 124 aa7.48□□□□□ -1.21
USB1-205ENST00000561743 TRBV7-6A0A0J9YX20 115 aa7.47□□□□□ -1.21
USB1-205ENST00000561743 LOC105371267A0A1B0GV96 52 aa7.47□□□□□ -1.21
USB1-205ENST00000561743 SEC61BP60468 96 aaKnown RBP7.47□□□□□ -1.21
USB1-205ENST00000561743 HRCT1Q6UXD1 115 aa7.47□□□□□ -1.21
USB1-205ENST00000561743 Q1RN00 199 aa7.46□□□□□ -1.22
USB1-205ENST00000561743 XP32Q5T750 250 aa7.46□□□□□ -1.22
USB1-205ENST00000561743 Q6ZVH6 145 aa7.46□□□□□ -1.22
USB1-205ENST00000561743 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.22
USB1-205ENST00000561743 A0A1B0GWB2 263 aa7.45□□□□□ -1.22
USB1-205ENST00000561743 A6NDN8 102 aa7.45□□□□□ -1.22
USB1-205ENST00000561743 S100A6P06703 90 aa7.45□□□□□ -1.22
USB1-205ENST00000561743 TAL2Q16559 108 aa7.45□□□□□ -1.22
USB1-205ENST00000561743 DEFB105AQ8NG35 78 aa7.45□□□□□ -1.22
USB1-205ENST00000561743 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
USB1-205ENST00000561743 TEX49A0A1B0GTD5 131 aa7.44□□□□□ -1.22
USB1-205ENST00000561743 AKR1D1P51857 326 aa7.44□□□□□ -1.22
USB1-205ENST00000561743 KRTAP9-2Q9BYQ4 174 aa7.44□□□□□ -1.22
USB1-205ENST00000561743 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
USB1-205ENST00000561743 SMIM29Q86T20 159 aa7.43□□□□□ -1.22
USB1-205ENST00000561743 IGLV5-48A0A075B6I7 105 aa7.42□□□□□ -1.22
USB1-205ENST00000561743 SNRPEP62304 92 aaKnown RBP7.41□□□□□ -1.22
USB1-205ENST00000561743 CD164Q04900 197 aa7.41□□□□□ -1.22
USB1-205ENST00000561743 HIST3H2BBQ8N257 126 aa7.41□□□□□ -1.22
USB1-205ENST00000561743 SMIM11BQ8TCY0 68 aa7.41□□□□□ -1.22
USB1-205ENST00000561743 PRO1933Q9H354 126 aa7.41□□□□□ -1.22
USB1-205ENST00000561743 TRAV13-2A0A0B4J235 113 aa7.4□□□□□ -1.22
USB1-205ENST00000561743 HIST1H2BLQ99880 126 aa7.4□□□□□ -1.22
USB1-205ENST00000561743 A4D1N5 150 aa7.39□□□□□ -1.23
USB1-205ENST00000561743 A0A0G2JQZ4 141 aa7.38□□□□□ -1.23
USB1-205ENST00000561743 H7C2G1 150 aa7.38□□□□□ -1.23
USB1-205ENST00000561743 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
USB1-205ENST00000561743 S100A2P29034 98 aa7.37□□□□□ -1.23
USB1-205ENST00000561743 Q5XG85 94 aa7.37□□□□□ -1.23
USB1-205ENST00000561743 NHP2Q9NX24 153 aaKnown RBP7.37□□□□□ -1.23
USB1-205ENST00000561743 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.23
USB1-205ENST00000561743 C1orf195Q5TG92 126 aa7.33□□□□□ -1.24
USB1-205ENST00000561743 VAMP3Q15836 100 aa7.32□□□□□ -1.24
USB1-205ENST00000561743 PCOTHQ58A44 107 aa7.32□□□□□ -1.24
USB1-205ENST00000561743 LINC00575Q6W349 94 aa7.32□□□□□ -1.24
USB1-205ENST00000561743 LCE2CQ5TA81 110 aa7.3□□□□□ -1.24
USB1-205ENST00000561743 Q6ZQY7 126 aa7.3□□□□□ -1.24
USB1-205ENST00000561743 F8WEM9 126 aa7.29□□□□□ -1.24
USB1-205ENST00000561743 KRTAP19-2Q3LHN2 52 aa7.29□□□□□ -1.24
USB1-205ENST00000561743 IGLV8-61A0A075B6I0 122 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 188.8 ms