RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 Q8NBF4 154 aa5.88□□□□□ -1.47
CLK3-205ENST00000561673 MIEN1Q9BRT3 115 aa5.88□□□□□ -1.47
CLK3-205ENST00000561673 SPANXB1Q9NS25 103 aaPredicted RBP5.88□□□□□ -1.47
CLK3-205ENST00000561673 A0A0J9YXY3 114 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 E9PLD3 99 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 NDUFC2O95298 119 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 IGLV6-57P01721 117 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 GAGE2AQ6NT46 116 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 SOSTDC1Q6X4U4 206 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 Q9BRP9 147 aa5.87□□□□□ -1.47
CLK3-205ENST00000561673 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 SYS1-DBNDD2H3BUS1 97 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BKO60814 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BJP06899 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BOP23527 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BBP33778 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BDP58876 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 NPC2P61916 151 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BCP62807 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST2H2BEQ16778 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.86□□□□□ -1.47
CLK3-205ENST00000561673 S100A7L2Q5SY68 101 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 Q6ZRX8 168 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BHQ93079 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BNQ99877 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 HIST1H2BMQ99879 126 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
CLK3-205ENST00000561673 TRAV23DV6A0A075B6W5 121 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 IGLV9-49A0A0B4J1Y8 123 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 A0A0U1RQV1 116 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 SPINK1P00995 79 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 MOBPQ13875 183 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 LINC01545Q5VT33 79 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 FP248Q71RG6 208 aaPredicted RBP5.83□□□□□ -1.48
CLK3-205ENST00000561673 LITAFQ99732 161 aa5.83□□□□□ -1.48
CLK3-205ENST00000561673 ZNF73O43830 326 aaPredicted RBP5.82□□□□□ -1.48
CLK3-205ENST00000561673 JOSD1Q15040 202 aaPredicted RBP5.82□□□□□ -1.48
CLK3-205ENST00000561673 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
CLK3-205ENST00000561673 PET117Q6UWS5 81 aa5.81□□□□□ -1.48
CLK3-205ENST00000561673 LINC00308Q8TCZ7 52 aa5.81□□□□□ -1.48
CLK3-205ENST00000561673 TRIAP1O43715 76 aa5.8□□□□□ -1.48
CLK3-205ENST00000561673 TIMM17BO60830 172 aa5.8□□□□□ -1.48
CLK3-205ENST00000561673 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
CLK3-205ENST00000561673 SPANXCQ9NY87 97 aa5.8□□□□□ -1.48
CLK3-205ENST00000561673 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
CLK3-205ENST00000561673 C3orf79P0CE67 100 aa5.79□□□□□ -1.48
CLK3-205ENST00000561673 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
CLK3-205ENST00000561673 Q8N377 158 aa5.79□□□□□ -1.48
CLK3-205ENST00000561673 OR13C6PQ8NH95 151 aa5.79□□□□□ -1.48
CLK3-205ENST00000561673 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
CLK3-205ENST00000561673 HINT1P49773 126 aaPredicted RBP5.78□□□□□ -1.48
CLK3-205ENST00000561673 RPS29P62273 56 aaKnown RBP5.78□□□□□ -1.48
CLK3-205ENST00000561673 CBY1Q9Y3M2 126 aa5.78□□□□□ -1.48
CLK3-205ENST00000561673 C5orf52A6NGY3 159 aa5.77□□□□□ -1.49
CLK3-205ENST00000561673 KRTDAPP60985 99 aa5.77□□□□□ -1.49
CLK3-205ENST00000561673 COA6Q5JTJ3 125 aaKnown RBP5.77□□□□□ -1.49
CLK3-205ENST00000561673 C9orf153Q5TBE3 101 aa5.77□□□□□ -1.49
CLK3-205ENST00000561673 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CLK3-205ENST00000561673 SPANXDQ9BXN6 97 aa5.76□□□□□ -1.49
CLK3-205ENST00000561673 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
CLK3-205ENST00000561673 SLC25A20O43772 301 aa5.75□□□□□ -1.49
CLK3-205ENST00000561673 DHRS4-AS1Q9P1J3 65 aa5.75□□□□□ -1.49
CLK3-205ENST00000561673 LINC00518Q8N0U6 118 aa5.74□□□□□ -1.49
CLK3-205ENST00000561673 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
CLK3-205ENST00000561673 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CLK3-205ENST00000561673 SPRR1BP22528 89 aa5.73□□□□□ -1.49
CLK3-205ENST00000561673 ELOF1P60002 83 aaKnown RBP5.73□□□□□ -1.49
CLK3-205ENST00000561673 ASB16-AS1Q495Z4 193 aa5.73□□□□□ -1.49
CLK3-205ENST00000561673 C6orf99Q4VX62 202 aa5.73□□□□□ -1.49
CLK3-205ENST00000561673 SCGB1D4Q6XE38 83 aa5.73□□□□□ -1.49
CLK3-205ENST00000561673 COX7BP24311 80 aa5.72□□□□□ -1.49
CLK3-205ENST00000561673 ATOH7Q8N100 152 aa5.72□□□□□ -1.49
CLK3-205ENST00000561673 C20orf202A1L168 122 aa5.71□□□□□ -1.5
CLK3-205ENST00000561673 SLC25A34Q6PIV7 304 aa5.71□□□□□ -1.5
CLK3-205ENST00000561673 LAMTOR3Q9UHA4 124 aa5.71□□□□□ -1.5
CLK3-205ENST00000561673 IFITM1P13164 125 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 PCP2Q8IVA1 136 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 MUSTN1Q8IVN3 82 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 DEFB105AQ8NG35 78 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 COPS9Q8WXC6 57 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 KRTAP4-1Q9BYQ7 146 aa5.7□□□□□ -1.5
CLK3-205ENST00000561673 TRBV7-6A0A0J9YX20 115 aa5.69□□□□□ -1.5
CLK3-205ENST00000561673 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
CLK3-205ENST00000561673 TAL2Q16559 108 aa5.69□□□□□ -1.5
CLK3-205ENST00000561673 Q6ZVH6 145 aa5.69□□□□□ -1.5
CLK3-205ENST00000561673 TEX49A0A1B0GTD5 131 aa5.68□□□□□ -1.5
CLK3-205ENST00000561673 A6NDN8 102 aa5.68□□□□□ -1.5
CLK3-205ENST00000561673 Q1RN00 199 aa5.68□□□□□ -1.5
CLK3-205ENST00000561673 A0A1B0GWB2 263 aa5.67□□□□□ -1.5
CLK3-205ENST00000561673 AKR1D1P51857 326 aa5.67□□□□□ -1.5
CLK3-205ENST00000561673 LINC01547P58512 204 aaPredicted RBP5.66□□□□□ -1.5
CLK3-205ENST00000561673 SMIM29Q86T20 159 aa5.66□□□□□ -1.5
CLK3-205ENST00000561673 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
CLK3-205ENST00000561673 PCP4P48539 62 aa5.65□□□□□ -1.5
CLK3-205ENST00000561673 PRO1933Q9H354 126 aa5.65□□□□□ -1.5
CLK3-205ENST00000561673 IGLV5-48A0A075B6I7 105 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 TRAV13-2A0A0B4J235 113 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 S100A6P06703 90 aa5.64□□□□□ -1.51
CLK3-205ENST00000561673 SNRPEP62304 92 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms