RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 IGFL1Q6UW32 110 aa6.78□□□□□ -1.32
GTF3C1-202ENST00000561623 H3BNG1 76 aa6.77□□□□□ -1.33
GTF3C1-202ENST00000561623 IGLV1-50A0A075B6I6 118 aa6.77□□□□□ -1.33
GTF3C1-202ENST00000561623 LINC00588Q9Y4M8 146 aa6.77□□□□□ -1.33
GTF3C1-202ENST00000561623 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
GTF3C1-202ENST00000561623 K7EIL1 84 aa6.76□□□□□ -1.33
GTF3C1-202ENST00000561623 Q8N377 158 aa6.76□□□□□ -1.33
GTF3C1-202ENST00000561623 KCNQ1DNQ9H478 68 aa6.76□□□□□ -1.33
GTF3C1-202ENST00000561623 PCSK5Q92824 1860 aa6.76□□□□□ -1.33
GTF3C1-202ENST00000561623 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
GTF3C1-202ENST00000561623 Q96NJ1 140 aa6.75□□□□□ -1.33
GTF3C1-202ENST00000561623 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
GTF3C1-202ENST00000561623 USP9YO00507 2555 aaPredicted RBP6.74□□□□□ -1.33
GTF3C1-202ENST00000561623 UQCR11O14957 56 aa6.74□□□□□ -1.33
GTF3C1-202ENST00000561623 PRR15Q8IV56 129 aa6.74□□□□□ -1.33
GTF3C1-202ENST00000561623 DNAH12Q6ZR08 3092 aa6.74□□□□□ -1.33
GTF3C1-202ENST00000561623 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
GTF3C1-202ENST00000561623 CSNK1G2-AS1Q8NCQ2 148 aa6.73□□□□□ -1.33
GTF3C1-202ENST00000561623 WIPF1O43516 503 aa6.73□□□□□ -1.33
GTF3C1-202ENST00000561623 A0A0D9SG42 100 aa6.72□□□□□ -1.33
GTF3C1-202ENST00000561623 USP24Q9UPU5 2620 aa6.71□□□□□ -1.33
GTF3C1-202ENST00000561623 LUZP6Q538Z0 58 aa6.71□□□□□ -1.33
GTF3C1-202ENST00000561623 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.33
GTF3C1-202ENST00000561623 CEP295Q9C0D2 2601 aa6.71□□□□□ -1.33
GTF3C1-202ENST00000561623 DSCR10P59022 87 aa6.71□□□□□ -1.34
GTF3C1-202ENST00000561623 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
GTF3C1-202ENST00000561623 OBSCN-AS1Q96MR7 158 aa6.7□□□□□ -1.34
GTF3C1-202ENST00000561623 MGAM2Q2M2H8 2515 aa6.69□□□□□ -1.34
GTF3C1-202ENST00000561623 LCA10Q71F78 164 aa6.69□□□□□ -1.34
GTF3C1-202ENST00000561623 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
GTF3C1-202ENST00000561623 GIG44P09565 113 aaPredicted RBP6.67□□□□□ -1.34
GTF3C1-202ENST00000561623 ANKRD17O75179 2603 aaKnown RBP6.67□□□□□ -1.34
GTF3C1-202ENST00000561623 A0A1W2PNM2 257 aa6.67□□□□□ -1.34
GTF3C1-202ENST00000561623 PRR34Q9NV39 138 aa6.67□□□□□ -1.34
GTF3C1-202ENST00000561623 ZNF575Q86XF7 245 aa6.66□□□□□ -1.34
GTF3C1-202ENST00000561623 HECTD1Q9ULT8 2610 aa6.66□□□□□ -1.34
GTF3C1-202ENST00000561623 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
GTF3C1-202ENST00000561623 A0A1B0GVX0 72 aa6.66□□□□□ -1.34
GTF3C1-202ENST00000561623 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
GTF3C1-202ENST00000561623 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
GTF3C1-202ENST00000561623 KRTAP10-11P60412 298 aa6.64□□□□□ -1.35
GTF3C1-202ENST00000561623 ANAPC11Q9NYG5 84 aa6.63□□□□□ -1.35
GTF3C1-202ENST00000561623 IGLV5-37A0A075B6J1 123 aa6.63□□□□□ -1.35
GTF3C1-202ENST00000561623 MAST4O15021 2626 aa6.63□□□□□ -1.35
GTF3C1-202ENST00000561623 Q5XG85 94 aa6.63□□□□□ -1.35
GTF3C1-202ENST00000561623 CDC42SE1Q9NRR8 79 aa6.63□□□□□ -1.35
GTF3C1-202ENST00000561623 CASC10Q5T4H9 136 aa6.62□□□□□ -1.35
GTF3C1-202ENST00000561623 OCR1Q9BZK8 76 aa6.62□□□□□ -1.35
GTF3C1-202ENST00000561623 FAM229BQ4G0N7 80 aa6.61□□□□□ -1.35
GTF3C1-202ENST00000561623 Q1T7F1 81 aa6.6□□□□□ -1.35
GTF3C1-202ENST00000561623 SPANXA2-OT1Q8N9U9 137 aa6.6□□□□□ -1.35
GTF3C1-202ENST00000561623 C5orf42Q9H799 3197 aa6.6□□□□□ -1.35
GTF3C1-202ENST00000561623 PCNTO95613 3336 aa6.6□□□□□ -1.35
GTF3C1-202ENST00000561623 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
GTF3C1-202ENST00000561623 ATRQ13535 2644 aa6.59□□□□□ -1.35
GTF3C1-202ENST00000561623 Q5VSD8 79 aa6.59□□□□□ -1.35
GTF3C1-202ENST00000561623 SETXQ7Z333 2677 aaKnown RBP6.58□□□□□ -1.36
GTF3C1-202ENST00000561623 Q6ZSA8 131 aa6.58□□□□□ -1.36
GTF3C1-202ENST00000561623 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
GTF3C1-202ENST00000561623 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
GTF3C1-202ENST00000561623 A0A096LNT2 108 aa6.56□□□□□ -1.36
GTF3C1-202ENST00000561623 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
GTF3C1-202ENST00000561623 PRR26Q8N8Z3 221 aa6.56□□□□□ -1.36
GTF3C1-202ENST00000561623 PRRC2CQ9Y520 2896 aaKnown RBP6.55□□□□□ -1.36
GTF3C1-202ENST00000561623 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
GTF3C1-202ENST00000561623 KRTAP10-3P60369 221 aa6.55□□□□□ -1.36
GTF3C1-202ENST00000561623 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
GTF3C1-202ENST00000561623 Q8N1X5 172 aa6.54□□□□□ -1.36
GTF3C1-202ENST00000561623 A0A087WTM6 91 aa6.54□□□□□ -1.36
GTF3C1-202ENST00000561623 ZNF861PO60384 105 aa6.54□□□□□ -1.36
GTF3C1-202ENST00000561623 C9orf163Q8N9P6 203 aa6.52□□□□□ -1.37
GTF3C1-202ENST00000561623 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
GTF3C1-202ENST00000561623 SPRR4Q96PI1 79 aa6.5□□□□□ -1.37
GTF3C1-202ENST00000561623 OXTP01178 125 aa6.49□□□□□ -1.37
GTF3C1-202ENST00000561623 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
GTF3C1-202ENST00000561623 PRAC1Q96KF2 57 aa6.49□□□□□ -1.37
GTF3C1-202ENST00000561623 Q75L30 129 aa6.48□□□□□ -1.37
GTF3C1-202ENST00000561623 CEP350Q5VT06 3117 aa6.48□□□□□ -1.37
GTF3C1-202ENST00000561623 TNP2Q05952 138 aa6.48□□□□□ -1.37
GTF3C1-202ENST00000561623 PSORS1C2Q9UIG4 136 aa6.48□□□□□ -1.37
GTF3C1-202ENST00000561623 BPTFQ12830 3046 aa6.47□□□□□ -1.37
GTF3C1-202ENST00000561623 Q8NDZ9 215 aa6.46□□□□□ -1.37
GTF3C1-202ENST00000561623 H3BS24 57 aa6.45□□□□□ -1.38
GTF3C1-202ENST00000561623 CNBPP62633 177 aaKnown RBP6.45□□□□□ -1.38
GTF3C1-202ENST00000561623 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
GTF3C1-202ENST00000561623 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
GTF3C1-202ENST00000561623 CR1P17927 2039 aa6.45□□□□□ -1.38
GTF3C1-202ENST00000561623 XIRP2A4UGR9 3374 aa6.44□□□□□ -1.38
GTF3C1-202ENST00000561623 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
GTF3C1-202ENST00000561623 A0A0C4DFX4 3053 aa6.43□□□□□ -1.38
GTF3C1-202ENST00000561623 Q5VV11 94 aa6.43□□□□□ -1.38
GTF3C1-202ENST00000561623 FLG2Q5D862 2391 aaPredicted RBP6.41□□□□□ -1.38
GTF3C1-202ENST00000561623 HELZ2Q9BYK8 2649 aaKnown RBP6.41□□□□□ -1.38
GTF3C1-202ENST00000561623 HRES1P13985 223 aa6.41□□□□□ -1.38
GTF3C1-202ENST00000561623 LINC01558Q9Y6Z2 57 aa6.4□□□□□ -1.38
GTF3C1-202ENST00000561623 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
GTF3C1-202ENST00000561623 SPINK7P58062 85 aa6.38□□□□□ -1.39
GTF3C1-202ENST00000561623 BAHCC1Q9P281 2608 aa6.38□□□□□ -1.39
GTF3C1-202ENST00000561623 LCE6AA0A183 80 aa6.38□□□□□ -1.39
GTF3C1-202ENST00000561623 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms