RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PKD1P98161 4303 aa6.54□□□□□ -1.36
TPM1-229ENST00000561242 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
TPM1-229ENST00000561242 SMIM6P0DI80 62 aa6.54□□□□□ -1.36
TPM1-229ENST00000561242 CRYGAP11844 174 aa6.54□□□□□ -1.36
TPM1-229ENST00000561242 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
TPM1-229ENST00000561242 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
TPM1-229ENST00000561242 H7C2G1 150 aa6.53□□□□□ -1.36
TPM1-229ENST00000561242 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
TPM1-229ENST00000561242 Q8NDZ9 215 aa6.53□□□□□ -1.36
TPM1-229ENST00000561242 SMCR5Q8TEV8 140 aa6.53□□□□□ -1.36
TPM1-229ENST00000561242 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
TPM1-229ENST00000561242 HSD52Q0P140 79 aa6.52□□□□□ -1.37
TPM1-229ENST00000561242 C6orf99Q4VX62 202 aa6.52□□□□□ -1.37
TPM1-229ENST00000561242 CEND1Q8N111 149 aa6.52□□□□□ -1.37
TPM1-229ENST00000561242 C12orf57Q99622 126 aa6.52□□□□□ -1.37
TPM1-229ENST00000561242 B5MCH6 92 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 GHRHP01286 108 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 KRTAP10-4P60372 401 aaPredicted RBP6.51□□□□□ -1.37
TPM1-229ENST00000561242 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 Q6ZRX8 168 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 TYMSOSQ8TAI1 123 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 LINC01600Q96MT4 127 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 DNAH11Q96DT5 4516 aa6.51□□□□□ -1.37
TPM1-229ENST00000561242 TRBV7-6A0A0J9YX20 115 aa6.5□□□□□ -1.37
TPM1-229ENST00000561242 COX6CP09669 75 aa6.5□□□□□ -1.37
TPM1-229ENST00000561242 SPRR1AP35321 89 aa6.5□□□□□ -1.37
TPM1-229ENST00000561242 PSMB2P49721 201 aa6.5□□□□□ -1.37
TPM1-229ENST00000561242 GAGE2AQ6NT46 116 aa6.5□□□□□ -1.37
TPM1-229ENST00000561242 M0R143 59 aa6.49□□□□□ -1.37
TPM1-229ENST00000561242 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
TPM1-229ENST00000561242 HERC2O95714 4834 aa6.48□□□□□ -1.37
TPM1-229ENST00000561242 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
TPM1-229ENST00000561242 FAM229BQ4G0N7 80 aa6.48□□□□□ -1.37
TPM1-229ENST00000561242 SMIM11BQ8TCY0 68 aa6.48□□□□□ -1.37
TPM1-229ENST00000561242 PRO1933Q9H354 126 aa6.48□□□□□ -1.37
TPM1-229ENST00000561242 PRO1854Q9UHT4 67 aa6.48□□□□□ -1.37
TPM1-229ENST00000561242 A0A0B4J2C4 111 aa6.47□□□□□ -1.37
TPM1-229ENST00000561242 SCGB1C2P0DMR2 95 aa6.47□□□□□ -1.37
TPM1-229ENST00000561242 DEFB105AQ8NG35 78 aa6.47□□□□□ -1.37
TPM1-229ENST00000561242 LAMTOR3Q9UHA4 124 aa6.47□□□□□ -1.37
TPM1-229ENST00000561242 H0YGX0 51 aa6.46□□□□□ -1.38
TPM1-229ENST00000561242 PRR26Q8N8Z3 221 aa6.46□□□□□ -1.38
TPM1-229ENST00000561242 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.38
TPM1-229ENST00000561242 DYNC1H1Q14204 4646 aaKnown RBP6.46□□□□□ -1.38
TPM1-229ENST00000561242 DNAH5Q8TE73 4624 aa6.46□□□□□ -1.38
TPM1-229ENST00000561242 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
TPM1-229ENST00000561242 F8WEM9 126 aa6.45□□□□□ -1.38
TPM1-229ENST00000561242 CFC1BP0CG36 223 aa6.45□□□□□ -1.38
TPM1-229ENST00000561242 CFC1P0CG37 223 aa6.45□□□□□ -1.38
TPM1-229ENST00000561242 ELOF1P60002 83 aaKnown RBP6.45□□□□□ -1.38
TPM1-229ENST00000561242 C9orf153Q5TBE3 101 aa6.45□□□□□ -1.38
TPM1-229ENST00000561242 C2orf91Q6ZV80 131 aa6.45□□□□□ -1.38
TPM1-229ENST00000561242 SPRR4Q96PI1 79 aa6.45□□□□□ -1.38
TPM1-229ENST00000561242 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
TPM1-229ENST00000561242 KRTAP13-1Q8IUC0 172 aa6.44□□□□□ -1.38
TPM1-229ENST00000561242 IGLV9-49A0A0B4J1Y8 123 aa6.43□□□□□ -1.38
TPM1-229ENST00000561242 TEX49A0A1B0GTD5 131 aa6.43□□□□□ -1.38
TPM1-229ENST00000561242 DNAL4O96015 105 aa6.43□□□□□ -1.38
TPM1-229ENST00000561242 KIAA1109Q2LD37 5005 aa6.43□□□□□ -1.38
TPM1-229ENST00000561242 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
TPM1-229ENST00000561242 CTAG1AP78358 180 aa6.42□□□□□ -1.38
TPM1-229ENST00000561242 SNHG12Q9BXW3 62 aa6.42□□□□□ -1.38
TPM1-229ENST00000561242 ANAPC11Q9NYG5 84 aa6.42□□□□□ -1.38
TPM1-229ENST00000561242 RYR1P21817 5038 aa6.41□□□□□ -1.38
TPM1-229ENST00000561242 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
TPM1-229ENST00000561242 LOC105371267A0A1B0GV96 52 aa6.4□□□□□ -1.38
TPM1-229ENST00000561242 FXYD2P54710 66 aa6.4□□□□□ -1.38
TPM1-229ENST00000561242 BATFQ16520 125 aa6.4□□□□□ -1.38
TPM1-229ENST00000561242 OCIAD2Q56VL3 154 aa6.4□□□□□ -1.38
TPM1-229ENST00000561242 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.38
TPM1-229ENST00000561242 Q9BRP9 147 aa6.4□□□□□ -1.38
TPM1-229ENST00000561242 H3BQ85 93 aa6.39□□□□□ -1.39
TPM1-229ENST00000561242 LYRM7Q5U5X0 104 aa6.39□□□□□ -1.39
TPM1-229ENST00000561242 LINC00575Q6W349 94 aa6.39□□□□□ -1.39
TPM1-229ENST00000561242 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
TPM1-229ENST00000561242 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
TPM1-229ENST00000561242 TSPAN13O95857 204 aa6.38□□□□□ -1.39
TPM1-229ENST00000561242 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
TPM1-229ENST00000561242 MOBPQ13875 183 aa6.38□□□□□ -1.39
TPM1-229ENST00000561242 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.38□□□□□ -1.39
TPM1-229ENST00000561242 A0A1B0GX51 115 aa6.37□□□□□ -1.39
TPM1-229ENST00000561242 LCE2BO14633 110 aa6.37□□□□□ -1.39
TPM1-229ENST00000561242 KRTAP1-4P0C5Y4 121 aa6.37□□□□□ -1.39
TPM1-229ENST00000561242 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
TPM1-229ENST00000561242 FABP2P12104 132 aa6.36□□□□□ -1.39
TPM1-229ENST00000561242 LINC00483Q53H64 154 aa6.36□□□□□ -1.39
TPM1-229ENST00000561242 Q8NBF4 154 aa6.36□□□□□ -1.39
TPM1-229ENST00000561242 PPDPFLQ8WWR9 84 aa6.36□□□□□ -1.39
TPM1-229ENST00000561242 HSPG2P98160 4391 aa6.35□□□□□ -1.39
TPM1-229ENST00000561242 Q6ZQY7 126 aa6.35□□□□□ -1.39
TPM1-229ENST00000561242 A0A087X002 238 aa6.34□□□□□ -1.39
TPM1-229ENST00000561242 K7ERJ3 54 aa6.34□□□□□ -1.39
TPM1-229ENST00000561242 C3orf22Q8N5N4 141 aa6.34□□□□□ -1.39
TPM1-229ENST00000561242 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
TPM1-229ENST00000561242 SPINK1P00995 79 aa6.33□□□□□ -1.4
TPM1-229ENST00000561242 TRIAP1O43715 76 aa6.32□□□□□ -1.4
TPM1-229ENST00000561242 MT1HL1P0DM35 61 aa6.32□□□□□ -1.4
TPM1-229ENST00000561242 SPRR1BP22528 89 aa6.32□□□□□ -1.4
TPM1-229ENST00000561242 PRR4Q16378 134 aa6.32□□□□□ -1.4
TPM1-229ENST00000561242 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms