RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
LMX1B-204ENST00000561065 IGLV6-57P01721 117 aa9.34□□□□□ -0.91
LMX1B-204ENST00000561065 NPC2P61916 151 aa9.34□□□□□ -0.91
LMX1B-204ENST00000561065 OR13C6PQ8NH95 151 aa9.34□□□□□ -0.91
LMX1B-204ENST00000561065 TRAV23DV6A0A075B6W5 121 aa9.33□□□□□ -0.92
LMX1B-204ENST00000561065 IFITM1P13164 125 aa9.33□□□□□ -0.92
LMX1B-204ENST00000561065 HIST3H2BBQ8N257 126 aa9.33□□□□□ -0.92
LMX1B-204ENST00000561065 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
LMX1B-204ENST00000561065 B5MCH6 92 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
LMX1B-204ENST00000561065 C4orf48Q5BLP8 95 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 HIST1H2BLQ99880 126 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 MUC2Q02817 5179 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 ZNF73O43830 326 aaPredicted RBP9.31□□□□□ -0.92
LMX1B-204ENST00000561065 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 SOSTDC1Q6X4U4 206 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 ATOH7Q8N100 152 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 LITAFQ99732 161 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 SPANXDQ9BXN6 97 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
LMX1B-204ENST00000561065 Q6ZRX8 168 aa9.3□□□□□ -0.92
LMX1B-204ENST00000561065 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
LMX1B-204ENST00000561065 C5orf52A6NGY3 159 aa9.29□□□□□ -0.92
LMX1B-204ENST00000561065 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
LMX1B-204ENST00000561065 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
LMX1B-204ENST00000561065 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
LMX1B-204ENST00000561065 MUC17Q685J3 4493 aa9.26□□□□□ -0.93
LMX1B-204ENST00000561065 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
LMX1B-204ENST00000561065 SCGB1D1O95968 90 aa9.25□□□□□ -0.93
LMX1B-204ENST00000561065 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
LMX1B-204ENST00000561065 RETNLBQ9BQ08 111 aa9.25□□□□□ -0.93
LMX1B-204ENST00000561065 DHRS4-AS1Q9P1J3 65 aa9.25□□□□□ -0.93
LMX1B-204ENST00000561065 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
LMX1B-204ENST00000561065 LINC00483Q53H64 154 aa9.23□□□□□ -0.93
LMX1B-204ENST00000561065 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
LMX1B-204ENST00000561065 TRAV13-2A0A0B4J235 113 aa9.22□□□□□ -0.93
LMX1B-204ENST00000561065 A6NDN8 102 aa9.22□□□□□ -0.93
LMX1B-204ENST00000561065 SSBP3-AS1Q7Z2R9 100 aa9.22□□□□□ -0.93
LMX1B-204ENST00000561065 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.94
LMX1B-204ENST00000561065 MUSTN1Q8IVN3 82 aa9.21□□□□□ -0.94
LMX1B-204ENST00000561065 Q9BRP9 147 aa9.21□□□□□ -0.94
LMX1B-204ENST00000561065 COX7BP24311 80 aa9.2□□□□□ -0.94
LMX1B-204ENST00000561065 A4D1N5 150 aa9.19□□□□□ -0.94
LMX1B-204ENST00000561065 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
LMX1B-204ENST00000561065 SPINK1P00995 79 aa9.18□□□□□ -0.94
LMX1B-204ENST00000561065 C6orf99Q4VX62 202 aa9.18□□□□□ -0.94
LMX1B-204ENST00000561065 VAMP3Q15836 100 aa9.17□□□□□ -0.94
LMX1B-204ENST00000561065 A0A1B0GWB2 263 aa9.16□□□□□ -0.94
LMX1B-204ENST00000561065 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
LMX1B-204ENST00000561065 NHP2Q9NX24 153 aaKnown RBP9.16□□□□□ -0.94
LMX1B-204ENST00000561065 IGLV9-49A0A0B4J1Y8 123 aa9.15□□□□□ -0.94
LMX1B-204ENST00000561065 Q8NBF4 154 aa9.15□□□□□ -0.94
LMX1B-204ENST00000561065 TAL2Q16559 108 aa9.14□□□□□ -0.95
LMX1B-204ENST00000561065 LAMTOR3Q9UHA4 124 aa9.14□□□□□ -0.95
LMX1B-204ENST00000561065 MOBPQ13875 183 aa9.13□□□□□ -0.95
LMX1B-204ENST00000561065 SLC25A20O43772 301 aa9.12□□□□□ -0.95
LMX1B-204ENST00000561065 C9orf153Q5TBE3 101 aa9.12□□□□□ -0.95
LMX1B-204ENST00000561065 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
LMX1B-204ENST00000561065 DLEU1O43261 78 aa9.11□□□□□ -0.95
LMX1B-204ENST00000561065 COX8AP10176 69 aa9.11□□□□□ -0.95
LMX1B-204ENST00000561065 TPRXLQ17RH7 258 aa9.11□□□□□ -0.95
LMX1B-204ENST00000561065 IGLV7-46A0A075B6I9 117 aa9.1□□□□□ -0.95
LMX1B-204ENST00000561065 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
LMX1B-204ENST00000561065 TEX49A0A1B0GTD5 131 aa9.09□□□□□ -0.95
LMX1B-204ENST00000561065 SPRR1BP22528 89 aa9.09□□□□□ -0.95
LMX1B-204ENST00000561065 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
LMX1B-204ENST00000561065 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
LMX1B-204ENST00000561065 FAT4Q6V0I7 4981 aa9.09□□□□□ -0.95
LMX1B-204ENST00000561065 VAMP8Q9BV40 100 aa9.08□□□□□ -0.96
LMX1B-204ENST00000561065 SMIM11BQ8TCY0 68 aa9.07□□□□□ -0.96
LMX1B-204ENST00000561065 SNCGO76070 127 aa9.06□□□□□ -0.96
LMX1B-204ENST00000561065 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
LMX1B-204ENST00000561065 SPATA45Q537H7 98 aa9.05□□□□□ -0.96
LMX1B-204ENST00000561065 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
LMX1B-204ENST00000561065 HIGD1BQ9P298 99 aa9.05□□□□□ -0.96
LMX1B-204ENST00000561065 PAM16Q9Y3D7 125 aa9.05□□□□□ -0.96
LMX1B-204ENST00000561065 BVES-AS1Q5T3Y7 98 aa9.03□□□□□ -0.96
LMX1B-204ENST00000561065 C14orf144Q96I85 54 aa9.03□□□□□ -0.96
LMX1B-204ENST00000561065 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
LMX1B-204ENST00000561065 LIMD2Q9BT23 127 aa9.02□□□□□ -0.97
LMX1B-204ENST00000561065 RAB37Q96AX2 223 aa9.01□□□□□ -0.97
LMX1B-204ENST00000561065 IGLV5-48A0A075B6I7 105 aa9□□□□□ -0.97
LMX1B-204ENST00000561065 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
LMX1B-204ENST00000561065 hADV29S1A0JD25 119 aa9□□□□□ -0.97
LMX1B-204ENST00000561065 A6NJY4 79 aa9□□□□□ -0.97
LMX1B-204ENST00000561065 CD164Q04900 197 aa9□□□□□ -0.97
LMX1B-204ENST00000561065 F8WEM9 126 aa8.99□□□□□ -0.97
LMX1B-204ENST00000561065 Q1RN00 199 aa8.99□□□□□ -0.97
LMX1B-204ENST00000561065 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
LMX1B-204ENST00000561065 LINC00575Q6W349 94 aa8.99□□□□□ -0.97
LMX1B-204ENST00000561065 A0A0U1RQV1 116 aa8.97□□□□□ -0.97
LMX1B-204ENST00000561065 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
LMX1B-204ENST00000561065 Q8N377 158 aa8.97□□□□□ -0.97
LMX1B-204ENST00000561065 H7C2G1 150 aa8.96□□□□□ -0.98
LMX1B-204ENST00000561065 C12orf57Q99622 126 aa8.96□□□□□ -0.98
LMX1B-204ENST00000561065 H0YGX0 51 aa8.95□□□□□ -0.98
LMX1B-204ENST00000561065 GHRHP01286 108 aa8.95□□□□□ -0.98
LMX1B-204ENST00000561065 A0A0B4J2C4 111 aa8.94□□□□□ -0.98
LMX1B-204ENST00000561065 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms