RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 IGKV2D-28P01615 120 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 IFITM1P13164 125 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 PRR3P79522 188 aaKnown RBP4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 MUSTN1Q8IVN3 82 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 LINC00518Q8N0U6 118 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 NKAPP1Q8N9T2 125 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 LINC00167Q96N53 147 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 PRO1933Q9H354 126 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 UQCR10Q9UDW1 63 aa4.36□□□□□ -1.71
CTDSPL2-210ENST00000560834 TRBV10-2A0A0K0K1G8 114 aa4.35□□□□□ -1.71
CTDSPL2-210ENST00000560834 Q5VSD8 79 aa4.35□□□□□ -1.71
CTDSPL2-210ENST00000560834 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
CTDSPL2-210ENST00000560834 IGLV1-50A0A075B6I6 118 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 M0R378 163 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 RPL37AP61513 92 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 UBE2BP63146 152 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 SRSF9Q13242 221 aaKnown RBP eCLIP4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 LBHQ53QV2 105 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 Q8N1X5 172 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 LINC00337Q8N6G1 96 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.71
CTDSPL2-210ENST00000560834 TRBV10-3A0A0K0K1G6 114 aa4.33□□□□□ -1.72
CTDSPL2-210ENST00000560834 A4D1N5 150 aa4.33□□□□□ -1.72
CTDSPL2-210ENST00000560834 IGLV6-57P01721 117 aa4.33□□□□□ -1.72
CTDSPL2-210ENST00000560834 HNRNPA3P51991 378 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-210ENST00000560834 HSD52Q0P140 79 aa4.33□□□□□ -1.72
CTDSPL2-210ENST00000560834 TAL2Q16559 108 aa4.33□□□□□ -1.72
CTDSPL2-210ENST00000560834 DDTP30046 118 aa4.32□□□□□ -1.72
CTDSPL2-210ENST00000560834 FXYD2P54710 66 aa4.32□□□□□ -1.72
CTDSPL2-210ENST00000560834 CEND1Q8N111 149 aa4.32□□□□□ -1.72
CTDSPL2-210ENST00000560834 TMEM126AQ9H061 195 aa4.32□□□□□ -1.72
CTDSPL2-210ENST00000560834 ABCA13Q86UQ4 5058 aa4.31□□□□□ -1.72
CTDSPL2-210ENST00000560834 TRAV23DV6A0A075B6W5 121 aa4.31□□□□□ -1.72
CTDSPL2-210ENST00000560834 TSTD3H0UI37 97 aa4.31□□□□□ -1.72
CTDSPL2-210ENST00000560834 SPRR1AP35321 89 aa4.31□□□□□ -1.72
CTDSPL2-210ENST00000560834 KCNQ1DNQ9H478 68 aa4.31□□□□□ -1.72
CTDSPL2-210ENST00000560834 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 BCE1O60756 84 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 S100A7L2Q5SY68 101 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 REG3GQ6UW15 175 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 KRTAP13-1Q8IUC0 172 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
CTDSPL2-210ENST00000560834 A0A0A0MQY5 61 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 IGLV7-43P04211 117 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 CFC1P0CG37 223 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 CTAG1AP78358 180 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 OR13C6PQ8NH95 151 aa4.29□□□□□ -1.72
CTDSPL2-210ENST00000560834 A0A1B0GWB2 263 aa4.28□□□□□ -1.72
CTDSPL2-210ENST00000560834 A6NDN8 102 aa4.28□□□□□ -1.72
CTDSPL2-210ENST00000560834 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
CTDSPL2-210ENST00000560834 PRLHP81277 87 aa4.28□□□□□ -1.72
CTDSPL2-210ENST00000560834 BVES-AS1Q5T3Y7 98 aa4.28□□□□□ -1.72
CTDSPL2-210ENST00000560834 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
CTDSPL2-210ENST00000560834 K7ERJ3 54 aa4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 ZNF73O43830 326 aaPredicted RBP4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 FAM19A1Q7Z5A9 133 aa4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 DIRC1Q969H9 104 aa4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 NHP2Q9NX24 153 aaKnown RBP4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
CTDSPL2-210ENST00000560834 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 H0Y9J4 135 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 ZNF861PO60384 105 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 UBE2AP49459 152 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 HINT1P49773 126 aaPredicted RBP4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 C6orf99Q4VX62 202 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 Q6ZRX8 168 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 RAB37Q96AX2 223 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 CBY1Q9Y3M2 126 aa4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
CTDSPL2-210ENST00000560834 M0R143 59 aa4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 ELOF1P60002 83 aaKnown RBP4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 SMCR5Q8TEV8 140 aa4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 Q9BRP9 147 aa4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 PRO1854Q9UHT4 67 aa4.25□□□□□ -1.73
CTDSPL2-210ENST00000560834 TNXBP22105 4242 aa4.24□□□□□ -1.73
CTDSPL2-210ENST00000560834 TRBV7-6A0A0J9YX20 115 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 H7C2G1 150 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 ERC2-IT1O76042 136 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 TSPAN13O95857 204 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 INAFM2P0DMQ5 153 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 COX7BP24311 80 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 HIGD2AQ9BW72 106 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 PCLOQ9Y6V0 5065 aa4.23□□□□□ -1.73
CTDSPL2-210ENST00000560834 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
CTDSPL2-210ENST00000560834 Q1RN00 199 aa4.22□□□□□ -1.73
CTDSPL2-210ENST00000560834 BATFQ16520 125 aa4.21□□□□□ -1.74
CTDSPL2-210ENST00000560834 SNHG12Q9BXW3 62 aa4.21□□□□□ -1.74
CTDSPL2-210ENST00000560834 PCP4L1A6NKN8 68 aa4.2□□□□□ -1.74
CTDSPL2-210ENST00000560834 FAM218AQ96MZ4 157 aa4.2□□□□□ -1.74
CTDSPL2-210ENST00000560834 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms