RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 TPRXLQ17RH7 258 aa6.33□□□□□ -1.4
GABPB1-210ENST00000560825 LCE5AQ5TCM9 118 aa6.33□□□□□ -1.4
GABPB1-210ENST00000560825 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
GABPB1-210ENST00000560825 DDTP30046 118 aa6.32□□□□□ -1.4
GABPB1-210ENST00000560825 LINC00483Q53H64 154 aa6.32□□□□□ -1.4
GABPB1-210ENST00000560825 GAGE2AQ6NT46 116 aa6.32□□□□□ -1.4
GABPB1-210ENST00000560825 TTTY13Q9BZ97 58 aa6.32□□□□□ -1.4
GABPB1-210ENST00000560825 A0A0J9YXY3 114 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BKO60814 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BJP06899 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BOP23527 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BBP33778 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BDP58876 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BCP62807 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST2H2BEQ16778 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BHQ93079 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 LITAFQ99732 161 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BNQ99877 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HIST1H2BMQ99879 126 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
GABPB1-210ENST00000560825 IGLV9-49A0A0B4J1Y8 123 aa6.3□□□□□ -1.4
GABPB1-210ENST00000560825 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
GABPB1-210ENST00000560825 KRTAP4-1Q9BYQ7 146 aa6.3□□□□□ -1.4
GABPB1-210ENST00000560825 CDIP1Q9H305 208 aa6.3□□□□□ -1.4
GABPB1-210ENST00000560825 LGALS3P17931 250 aaKnown RBP6.29□□□□□ -1.4
GABPB1-210ENST00000560825 MOBPQ13875 183 aa6.29□□□□□ -1.4
GABPB1-210ENST00000560825 Q6ZRX8 168 aa6.29□□□□□ -1.4
GABPB1-210ENST00000560825 SVIPQ8NHG7 77 aa6.29□□□□□ -1.4
GABPB1-210ENST00000560825 TRBV10-2A0A0K0K1G8 114 aa6.28□□□□□ -1.4
GABPB1-210ENST00000560825 E9PLD3 99 aa6.28□□□□□ -1.4
GABPB1-210ENST00000560825 SYS1-DBNDD2H3BUS1 97 aa6.28□□□□□ -1.4
GABPB1-210ENST00000560825 C21orf62-AS1Q17RA5 79 aa6.28□□□□□ -1.4
GABPB1-210ENST00000560825 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
GABPB1-210ENST00000560825 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
GABPB1-210ENST00000560825 SPANXB1Q9NS25 103 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-210ENST00000560825 ZNF706Q9Y5V0 76 aaPredicted RBP6.28□□□□□ -1.4
GABPB1-210ENST00000560825 LINC00587B1AMM8 73 aa6.26□□□□□ -1.41
GABPB1-210ENST00000560825 NMUP48645 174 aa6.26□□□□□ -1.41
GABPB1-210ENST00000560825 HERVK_113P61574 105 aa6.26□□□□□ -1.41
GABPB1-210ENST00000560825 TRAV23DV6A0A075B6W5 121 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 NDUFC2O95298 119 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 LINC01545Q5VT33 79 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 Q8N377 158 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 ZNF73O43830 326 aaPredicted RBP6.25□□□□□ -1.41
GABPB1-210ENST00000560825 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 SPAG11AQ6PDA7 123 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 LINC00308Q8TCZ7 52 aa6.25□□□□□ -1.41
GABPB1-210ENST00000560825 C3orf79P0CE67 100 aa6.24□□□□□ -1.41
GABPB1-210ENST00000560825 MIEN1Q9BRT3 115 aa6.24□□□□□ -1.41
GABPB1-210ENST00000560825 CTAG1AP78358 180 aa6.23□□□□□ -1.41
GABPB1-210ENST00000560825 SPINK1P00995 79 aa6.22□□□□□ -1.41
GABPB1-210ENST00000560825 ANKRD39Q53RE8 183 aa6.21□□□□□ -1.42
GABPB1-210ENST00000560825 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-210ENST00000560825 ZNF815PA8K554 130 aa6.2□□□□□ -1.42
GABPB1-210ENST00000560825 ATOH7Q8N100 152 aa6.2□□□□□ -1.42
GABPB1-210ENST00000560825 C9orf153Q5TBE3 101 aa6.19□□□□□ -1.42
GABPB1-210ENST00000560825 PET117Q6UWS5 81 aa6.19□□□□□ -1.42
GABPB1-210ENST00000560825 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
GABPB1-210ENST00000560825 SPANXCQ9NY87 97 aa6.19□□□□□ -1.42
GABPB1-210ENST00000560825 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
GABPB1-210ENST00000560825 KRTDAPP60985 99 aa6.18□□□□□ -1.42
GABPB1-210ENST00000560825 HRCT1Q6UXD1 115 aa6.18□□□□□ -1.42
GABPB1-210ENST00000560825 OR13C6PQ8NH95 151 aa6.18□□□□□ -1.42
GABPB1-210ENST00000560825 TIMM17BO60830 172 aa6.17□□□□□ -1.42
GABPB1-210ENST00000560825 S100A12P80511 92 aa6.17□□□□□ -1.42
GABPB1-210ENST00000560825 ASB16-AS1Q495Z4 193 aa6.17□□□□□ -1.42
GABPB1-210ENST00000560825 A0A0U1RQV1 116 aa6.16□□□□□ -1.42
GABPB1-210ENST00000560825 COA6Q5JTJ3 125 aaKnown RBP6.16□□□□□ -1.42
GABPB1-210ENST00000560825 PCP2Q8IVA1 136 aa6.16□□□□□ -1.42
GABPB1-210ENST00000560825 SPRR1BP22528 89 aa6.16□□□□□ -1.42
GABPB1-210ENST00000560825 ELOF1P60002 83 aaKnown RBP6.16□□□□□ -1.42
GABPB1-210ENST00000560825 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
GABPB1-210ENST00000560825 JOSD1Q15040 202 aaPredicted RBP6.16□□□□□ -1.42
GABPB1-210ENST00000560825 C6orf99Q4VX62 202 aa6.16□□□□□ -1.42
GABPB1-210ENST00000560825 KRTAP9-8Q9BYQ0 159 aa6.16□□□□□ -1.42
GABPB1-210ENST00000560825 LINC01547P58512 204 aaPredicted RBP6.15□□□□□ -1.43
GABPB1-210ENST00000560825 Q1RN00 199 aa6.14□□□□□ -1.43
GABPB1-210ENST00000560825 SMIM29Q86T20 159 aa6.14□□□□□ -1.43
GABPB1-210ENST00000560825 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
GABPB1-210ENST00000560825 SLC25A20O43772 301 aa6.13□□□□□ -1.43
GABPB1-210ENST00000560825 COX7BP24311 80 aa6.13□□□□□ -1.43
GABPB1-210ENST00000560825 DEFB105AQ8NG35 78 aa6.13□□□□□ -1.43
GABPB1-210ENST00000560825 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
GABPB1-210ENST00000560825 H7C2G1 150 aa6.12□□□□□ -1.43
GABPB1-210ENST00000560825 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
GABPB1-210ENST00000560825 MUSTN1Q8IVN3 82 aa6.12□□□□□ -1.43
GABPB1-210ENST00000560825 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
GABPB1-210ENST00000560825 H3BS24 57 aa6.1□□□□□ -1.43
GABPB1-210ENST00000560825 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
GABPB1-210ENST00000560825 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
GABPB1-210ENST00000560825 C5orf52A6NGY3 159 aa6.09□□□□□ -1.43
GABPB1-210ENST00000560825 HINT1P49773 126 aaPredicted RBP6.08□□□□□ -1.44
GABPB1-210ENST00000560825 A6NDN8 102 aa6.08□□□□□ -1.44
GABPB1-210ENST00000560825 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
GABPB1-210ENST00000560825 LINC00518Q8N0U6 118 aa6.08□□□□□ -1.44
GABPB1-210ENST00000560825 IGLV5-48A0A075B6I7 105 aa6.07□□□□□ -1.44
GABPB1-210ENST00000560825 TAL2Q16559 108 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms