RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 C3orf22Q8N5N4 141 aa8.14□□□□□ -1.11
TPM1-223ENST00000560445 SPINK1P00995 79 aa8.13□□□□□ -1.11
TPM1-223ENST00000560445 LINC00483Q53H64 154 aa8.13□□□□□ -1.11
TPM1-223ENST00000560445 PET117Q6UWS5 81 aa8.13□□□□□ -1.11
TPM1-223ENST00000560445 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
TPM1-223ENST00000560445 B5MCH6 92 aa8.12□□□□□ -1.11
TPM1-223ENST00000560445 Q6ZRX8 168 aa8.12□□□□□ -1.11
TPM1-223ENST00000560445 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
TPM1-223ENST00000560445 A0A0J9YXY3 114 aa8.11□□□□□ -1.11
TPM1-223ENST00000560445 Q8NBF4 154 aa8.11□□□□□ -1.11
TPM1-223ENST00000560445 C5orf52A6NGY3 159 aa8.1□□□□□ -1.11
TPM1-223ENST00000560445 IGLV6-57P01721 117 aa8.1□□□□□ -1.11
TPM1-223ENST00000560445 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
TPM1-223ENST00000560445 GAGE2AQ6NT46 116 aa8.1□□□□□ -1.11
TPM1-223ENST00000560445 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
TPM1-223ENST00000560445 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
TPM1-223ENST00000560445 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
TPM1-223ENST00000560445 C20orf202A1L168 122 aa8.08□□□□□ -1.12
TPM1-223ENST00000560445 TIMM17BO60830 172 aa8.08□□□□□ -1.12
TPM1-223ENST00000560445 NPC2P61916 151 aa8.08□□□□□ -1.12
TPM1-223ENST00000560445 COPS9Q8WXC6 57 aa8.08□□□□□ -1.12
TPM1-223ENST00000560445 ZNF73O43830 326 aaPredicted RBP8.07□□□□□ -1.12
TPM1-223ENST00000560445 AKR1D1P51857 326 aa8.07□□□□□ -1.12
TPM1-223ENST00000560445 KRTDAPP60985 99 aa8.07□□□□□ -1.12
TPM1-223ENST00000560445 ADAMTSL4-AS1Q5T5F5 129 aa8.07□□□□□ -1.12
TPM1-223ENST00000560445 SLC25A34Q6PIV7 304 aa8.07□□□□□ -1.12
TPM1-223ENST00000560445 SPANXCQ9NY87 97 aa8.07□□□□□ -1.12
TPM1-223ENST00000560445 ZNF815PA8K554 130 aa8.06□□□□□ -1.12
TPM1-223ENST00000560445 C3orf79P0CE67 100 aa8.06□□□□□ -1.12
TPM1-223ENST00000560445 MOBPQ13875 183 aa8.06□□□□□ -1.12
TPM1-223ENST00000560445 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
TPM1-223ENST00000560445 IGLV9-49A0A0B4J1Y8 123 aa8.05□□□□□ -1.12
TPM1-223ENST00000560445 LINC00518Q8N0U6 118 aa8.04□□□□□ -1.12
TPM1-223ENST00000560445 OR13C6PQ8NH95 151 aa8.04□□□□□ -1.12
TPM1-223ENST00000560445 LINC00308Q8TCZ7 52 aa8.04□□□□□ -1.12
TPM1-223ENST00000560445 SLC25A20O43772 301 aa8.03□□□□□ -1.12
TPM1-223ENST00000560445 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
TPM1-223ENST00000560445 Q9BRP9 147 aa8.03□□□□□ -1.12
TPM1-223ENST00000560445 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
TPM1-223ENST00000560445 DHRS4-AS1Q9P1J3 65 aa8.03□□□□□ -1.12
TPM1-223ENST00000560445 C9orf153Q5TBE3 101 aa8.02□□□□□ -1.13
TPM1-223ENST00000560445 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
TPM1-223ENST00000560445 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
TPM1-223ENST00000560445 LITAFQ99732 161 aa8.01□□□□□ -1.13
TPM1-223ENST00000560445 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
TPM1-223ENST00000560445 MUC2Q02817 5179 aa7.98□□□□□ -1.13
TPM1-223ENST00000560445 Q6ZVH6 145 aa7.98□□□□□ -1.13
TPM1-223ENST00000560445 LIMD2Q9BT23 127 aa7.98□□□□□ -1.13
TPM1-223ENST00000560445 SNRPEP62304 92 aaKnown RBP7.97□□□□□ -1.13
TPM1-223ENST00000560445 KRTAP13-3Q3SY46 172 aa7.97□□□□□ -1.13
TPM1-223ENST00000560445 TTTY13Q9BZ97 58 aa7.97□□□□□ -1.13
TPM1-223ENST00000560445 LAMTOR3Q9UHA4 124 aa7.97□□□□□ -1.13
TPM1-223ENST00000560445 IFITM1P13164 125 aa7.96□□□□□ -1.14
TPM1-223ENST00000560445 S100A2P29034 98 aa7.96□□□□□ -1.14
TPM1-223ENST00000560445 SEC61BP60468 96 aaKnown RBP7.96□□□□□ -1.14
TPM1-223ENST00000560445 XP32Q5T750 250 aa7.96□□□□□ -1.14
TPM1-223ENST00000560445 Q8N377 158 aa7.96□□□□□ -1.14
TPM1-223ENST00000560445 SPRR1BP22528 89 aa7.95□□□□□ -1.14
TPM1-223ENST00000560445 S100A1P23297 94 aa7.95□□□□□ -1.14
TPM1-223ENST00000560445 COX7BP24311 80 aa7.95□□□□□ -1.14
TPM1-223ENST00000560445 TRBV7-6A0A0J9YX20 115 aa7.94□□□□□ -1.14
TPM1-223ENST00000560445 ELOF1P60002 83 aaKnown RBP7.94□□□□□ -1.14
TPM1-223ENST00000560445 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
TPM1-223ENST00000560445 ANKRD39Q53RE8 183 aa7.93□□□□□ -1.14
TPM1-223ENST00000560445 A4D1N5 150 aa7.92□□□□□ -1.14
TPM1-223ENST00000560445 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
TPM1-223ENST00000560445 S100A6P06703 90 aa7.92□□□□□ -1.14
TPM1-223ENST00000560445 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
TPM1-223ENST00000560445 C6orf99Q4VX62 202 aa7.92□□□□□ -1.14
TPM1-223ENST00000560445 ST20-AS1Q8NBB2 130 aa7.92□□□□□ -1.14
TPM1-223ENST00000560445 A0A1B0GWB2 263 aa7.91□□□□□ -1.14
TPM1-223ENST00000560445 A6NDN8 102 aa7.91□□□□□ -1.14
TPM1-223ENST00000560445 TAL2Q16559 108 aa7.91□□□□□ -1.14
TPM1-223ENST00000560445 NHP2Q9NX24 153 aaKnown RBP7.91□□□□□ -1.14
TPM1-223ENST00000560445 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
TPM1-223ENST00000560445 TEX49A0A1B0GTD5 131 aa7.89□□□□□ -1.15
TPM1-223ENST00000560445 CD164Q04900 197 aa7.89□□□□□ -1.15
TPM1-223ENST00000560445 MUSTN1Q8IVN3 82 aa7.89□□□□□ -1.15
TPM1-223ENST00000560445 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
TPM1-223ENST00000560445 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
TPM1-223ENST00000560445 HIST1H2BLQ99880 126 aa7.88□□□□□ -1.15
TPM1-223ENST00000560445 PRO1933Q9H354 126 aa7.88□□□□□ -1.15
TPM1-223ENST00000560445 DEFB105AQ8NG35 78 aa7.86□□□□□ -1.15
TPM1-223ENST00000560445 H7C2G1 150 aa7.85□□□□□ -1.15
TPM1-223ENST00000560445 VAMP3Q15836 100 aa7.85□□□□□ -1.15
TPM1-223ENST00000560445 LINC01547P58512 204 aaPredicted RBP7.83□□□□□ -1.16
TPM1-223ENST00000560445 Q1RN00 199 aa7.83□□□□□ -1.16
TPM1-223ENST00000560445 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
TPM1-223ENST00000560445 IGLV5-48A0A075B6I7 105 aa7.82□□□□□ -1.16
TPM1-223ENST00000560445 FAT4Q6V0I7 4981 aa7.82□□□□□ -1.16
TPM1-223ENST00000560445 F8WEM9 126 aa7.81□□□□□ -1.16
TPM1-223ENST00000560445 SCGB1D1O95968 90 aa7.81□□□□□ -1.16
TPM1-223ENST00000560445 Q5XG85 94 aa7.81□□□□□ -1.16
TPM1-223ENST00000560445 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
TPM1-223ENST00000560445 SMIM11BQ8TCY0 68 aa7.8□□□□□ -1.16
TPM1-223ENST00000560445 KRTAP4-8Q9BYQ9 185 aa7.78□□□□□ -1.16
TPM1-223ENST00000560445 TCL1BO95988 128 aa7.77□□□□□ -1.17
TPM1-223ENST00000560445 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
TPM1-223ENST00000560445 SMIM29Q86T20 159 aa7.74□□□□□ -1.17
TPM1-223ENST00000560445 SNCGO76070 127 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 258.3 ms