RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 TRAV23DV6A0A075B6W5 121 aa7.82□□□□□ -1.16
NEDD8-208ENST00000560427 ETDCA0A1B0GVM5 59 aa7.82□□□□□ -1.16
NEDD8-208ENST00000560427 KRTAP4-16G5E9R7 235 aaPredicted RBP7.82□□□□□ -1.16
NEDD8-208ENST00000560427 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
NEDD8-208ENST00000560427 VAMP8Q9BV40 100 aa7.82□□□□□ -1.16
NEDD8-208ENST00000560427 KRTAP10-8P60410 259 aa7.81□□□□□ -1.16
NEDD8-208ENST00000560427 RPL13AP40429 203 aaKnown RBP7.8□□□□□ -1.16
NEDD8-208ENST00000560427 SPATA45Q537H7 98 aa7.8□□□□□ -1.16
NEDD8-208ENST00000560427 PAM16Q9Y3D7 125 aa7.8□□□□□ -1.16
NEDD8-208ENST00000560427 ZNF73O43830 326 aaPredicted RBP7.79□□□□□ -1.16
NEDD8-208ENST00000560427 MUSTN1Q8IVN3 82 aa7.79□□□□□ -1.16
NEDD8-208ENST00000560427 B5MCH6 92 aa7.78□□□□□ -1.16
NEDD8-208ENST00000560427 OR13C6PQ8NH95 151 aa7.78□□□□□ -1.16
NEDD8-208ENST00000560427 HIGD2AQ9BW72 106 aa7.78□□□□□ -1.16
NEDD8-208ENST00000560427 ZNF706Q9Y5V0 76 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-208ENST00000560427 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-208ENST00000560427 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
NEDD8-208ENST00000560427 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
NEDD8-208ENST00000560427 Q6ZRX8 168 aa7.77□□□□□ -1.17
NEDD8-208ENST00000560427 HERC1Q15751 4861 aa7.77□□□□□ -1.17
NEDD8-208ENST00000560427 SLC25A34Q6PIV7 304 aa7.76□□□□□ -1.17
NEDD8-208ENST00000560427 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
NEDD8-208ENST00000560427 TRAV13-2A0A0B4J235 113 aa7.75□□□□□ -1.17
NEDD8-208ENST00000560427 CRYGAP11844 174 aa7.75□□□□□ -1.17
NEDD8-208ENST00000560427 C14orf144Q96I85 54 aa7.75□□□□□ -1.17
NEDD8-208ENST00000560427 HIGD1BQ9P298 99 aa7.75□□□□□ -1.17
NEDD8-208ENST00000560427 TNXBP22105 4242 aa7.75□□□□□ -1.17
NEDD8-208ENST00000560427 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
NEDD8-208ENST00000560427 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
NEDD8-208ENST00000560427 A6NDN8 102 aa7.73□□□□□ -1.17
NEDD8-208ENST00000560427 SPRR4Q96PI1 79 aa7.73□□□□□ -1.17
NEDD8-208ENST00000560427 TRBV7-6A0A0J9YX20 115 aa7.72□□□□□ -1.17
NEDD8-208ENST00000560427 A4D1N5 150 aa7.72□□□□□ -1.17
NEDD8-208ENST00000560427 A0A087X002 238 aa7.71□□□□□ -1.18
NEDD8-208ENST00000560427 ELOF1P60002 83 aaKnown RBP7.71□□□□□ -1.18
NEDD8-208ENST00000560427 Q9BRP9 147 aa7.71□□□□□ -1.18
NEDD8-208ENST00000560427 TAL2Q16559 108 aa7.7□□□□□ -1.18
NEDD8-208ENST00000560427 C6orf99Q4VX62 202 aa7.7□□□□□ -1.18
NEDD8-208ENST00000560427 C2orf91Q6ZV80 131 aa7.7□□□□□ -1.18
NEDD8-208ENST00000560427 DHRS4-AS1Q9P1J3 65 aa7.7□□□□□ -1.18
NEDD8-208ENST00000560427 A0A1B0GWB2 263 aa7.69□□□□□ -1.18
NEDD8-208ENST00000560427 COX7BP24311 80 aa7.69□□□□□ -1.18
NEDD8-208ENST00000560427 LINC00483Q53H64 154 aa7.69□□□□□ -1.18
NEDD8-208ENST00000560427 TYMSOSQ8TAI1 123 aa7.68□□□□□ -1.18
NEDD8-208ENST00000560427 ANAPC11Q9NYG5 84 aa7.68□□□□□ -1.18
NEDD8-208ENST00000560427 ERC2-IT1O76042 136 aa7.66□□□□□ -1.18
NEDD8-208ENST00000560427 KRTAP13-2Q52LG2 175 aa7.66□□□□□ -1.18
NEDD8-208ENST00000560427 SMIM11BQ8TCY0 68 aa7.66□□□□□ -1.18
NEDD8-208ENST00000560427 TMEM238LA0A1B0GVL6 79 aa7.65□□□□□ -1.18
NEDD8-208ENST00000560427 A6NJY4 79 aa7.65□□□□□ -1.18
NEDD8-208ENST00000560427 UQCR10Q9UDW1 63 aa7.65□□□□□ -1.18
NEDD8-208ENST00000560427 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
NEDD8-208ENST00000560427 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
NEDD8-208ENST00000560427 CTAG1AP78358 180 aa7.64□□□□□ -1.19
NEDD8-208ENST00000560427 VAMP3Q15836 100 aa7.64□□□□□ -1.19
NEDD8-208ENST00000560427 GAGE2AQ6NT46 116 aa7.64□□□□□ -1.19
NEDD8-208ENST00000560427 CEND1Q8N111 149 aa7.64□□□□□ -1.19
NEDD8-208ENST00000560427 NHP2Q9NX24 153 aaKnown RBP7.64□□□□□ -1.19
NEDD8-208ENST00000560427 HSD52Q0P140 79 aa7.63□□□□□ -1.19
NEDD8-208ENST00000560427 C12orf57Q99622 126 aa7.63□□□□□ -1.19
NEDD8-208ENST00000560427 RAB37Q96AX2 223 aa7.62□□□□□ -1.19
NEDD8-208ENST00000560427 CFC1BP0CG36 223 aa7.61□□□□□ -1.19
NEDD8-208ENST00000560427 CFC1P0CG37 223 aa7.61□□□□□ -1.19
NEDD8-208ENST00000560427 SPRR1BP22528 89 aa7.61□□□□□ -1.19
NEDD8-208ENST00000560427 BVES-AS1Q5T3Y7 98 aa7.61□□□□□ -1.19
NEDD8-208ENST00000560427 LINC00304Q8N9R0 145 aa7.61□□□□□ -1.19
NEDD8-208ENST00000560427 HMCN2Q8NDA2 5059 aa7.6□□□□□ -1.19
NEDD8-208ENST00000560427 SLC25A20O43772 301 aa7.6□□□□□ -1.19
NEDD8-208ENST00000560427 C3orf22Q8N5N4 141 aa7.6□□□□□ -1.19
NEDD8-208ENST00000560427 ST20-AS1Q8NBB2 130 aa7.6□□□□□ -1.19
NEDD8-208ENST00000560427 SPAG11AQ6PDA7 123 aa7.59□□□□□ -1.19
NEDD8-208ENST00000560427 FXYD2P54710 66 aa7.58□□□□□ -1.2
NEDD8-208ENST00000560427 SSBP3-AS1Q7Z2R9 100 aa7.58□□□□□ -1.2
NEDD8-208ENST00000560427 TEX49A0A1B0GTD5 131 aa7.57□□□□□ -1.2
NEDD8-208ENST00000560427 LINC00575Q6W349 94 aa7.57□□□□□ -1.2
NEDD8-208ENST00000560427 PRO1854Q9UHT4 67 aa7.57□□□□□ -1.2
NEDD8-208ENST00000560427 IGLV5-48A0A075B6I7 105 aa7.56□□□□□ -1.2
NEDD8-208ENST00000560427 MOBPQ13875 183 aa7.56□□□□□ -1.2
NEDD8-208ENST00000560427 Q8NBF4 154 aa7.56□□□□□ -1.2
NEDD8-208ENST00000560427 LAMTOR3Q9UHA4 124 aa7.56□□□□□ -1.2
NEDD8-208ENST00000560427 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
NEDD8-208ENST00000560427 H7C2G1 150 aa7.55□□□□□ -1.2
NEDD8-208ENST00000560427 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
NEDD8-208ENST00000560427 hADV29S1A0JD25 119 aa7.54□□□□□ -1.2
NEDD8-208ENST00000560427 H0YGX0 51 aa7.54□□□□□ -1.2
NEDD8-208ENST00000560427 Q1RN00 199 aa7.54□□□□□ -1.2
NEDD8-208ENST00000560427 LOC105371267A0A1B0GV96 52 aa7.53□□□□□ -1.2
NEDD8-208ENST00000560427 SPINK1P00995 79 aa7.53□□□□□ -1.2
NEDD8-208ENST00000560427 C9orf153Q5TBE3 101 aa7.53□□□□□ -1.2
NEDD8-208ENST00000560427 SNCGO76070 127 aa7.52□□□□□ -1.21
NEDD8-208ENST00000560427 TSPAN13O95857 204 aa7.52□□□□□ -1.21
NEDD8-208ENST00000560427 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-208ENST00000560427 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
NEDD8-208ENST00000560427 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.52□□□□□ -1.21
NEDD8-208ENST00000560427 DEFB105AQ8NG35 78 aa7.52□□□□□ -1.21
NEDD8-208ENST00000560427 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
NEDD8-208ENST00000560427 PRO1933Q9H354 126 aa7.51□□□□□ -1.21
NEDD8-208ENST00000560427 A0A1B0GX51 115 aa7.5□□□□□ -1.21
NEDD8-208ENST00000560427 Q6ZQY7 126 aa7.5□□□□□ -1.21
NEDD8-208ENST00000560427 TSTD3H0UI37 97 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms