RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
IDH3A-219ENST00000560414 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
IDH3A-219ENST00000560414 PRYO14603 147 aa8.58□□□□□ -1.04
IDH3A-219ENST00000560414 KCNQ1DNQ9H478 68 aa8.58□□□□□ -1.04
IDH3A-219ENST00000560414 LOC107984156A0A0G2JMH3 177 aa8.57□□□□□ -1.04
IDH3A-219ENST00000560414 SYS1-DBNDD2H3BUS1 97 aa8.57□□□□□ -1.04
IDH3A-219ENST00000560414 NMUP48645 174 aa8.57□□□□□ -1.04
IDH3A-219ENST00000560414 ARL17AQ8IVW1 177 aa8.57□□□□□ -1.04
IDH3A-219ENST00000560414 KRTAP4-9Q9BYQ8 210 aa8.57□□□□□ -1.04
IDH3A-219ENST00000560414 SPRR1AP35321 89 aa8.56□□□□□ -1.04
IDH3A-219ENST00000560414 E9PLD3 99 aa8.55□□□□□ -1.04
IDH3A-219ENST00000560414 KRTAP4-16G5E9R7 235 aaPredicted RBP8.55□□□□□ -1.04
IDH3A-219ENST00000560414 C3orf22Q8N5N4 141 aa8.55□□□□□ -1.04
IDH3A-219ENST00000560414 LINC00337Q8N6G1 96 aa8.55□□□□□ -1.04
IDH3A-219ENST00000560414 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
IDH3A-219ENST00000560414 SPRR4Q96PI1 79 aa8.55□□□□□ -1.04
IDH3A-219ENST00000560414 A0A0J9YXY3 114 aa8.54□□□□□ -1.04
IDH3A-219ENST00000560414 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
IDH3A-219ENST00000560414 NPC2P61916 151 aa8.54□□□□□ -1.04
IDH3A-219ENST00000560414 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
IDH3A-219ENST00000560414 DDTP30046 118 aa8.53□□□□□ -1.04
IDH3A-219ENST00000560414 SOSTDC1Q6X4U4 206 aa8.53□□□□□ -1.04
IDH3A-219ENST00000560414 SMCR5Q8TEV8 140 aa8.53□□□□□ -1.04
IDH3A-219ENST00000560414 MIEN1Q9BRT3 115 aa8.53□□□□□ -1.04
IDH3A-219ENST00000560414 TRBV10-2A0A0K0K1G8 114 aa8.52□□□□□ -1.05
IDH3A-219ENST00000560414 LINC01545Q5VT33 79 aa8.52□□□□□ -1.05
IDH3A-219ENST00000560414 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
IDH3A-219ENST00000560414 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
IDH3A-219ENST00000560414 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
IDH3A-219ENST00000560414 PPDPFQ9H3Y8 114 aa8.51□□□□□ -1.05
IDH3A-219ENST00000560414 SPANXB1Q9NS25 103 aaPredicted RBP8.51□□□□□ -1.05
IDH3A-219ENST00000560414 C3orf79P0CE67 100 aa8.5□□□□□ -1.05
IDH3A-219ENST00000560414 S100A12P80511 92 aa8.5□□□□□ -1.05
IDH3A-219ENST00000560414 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
IDH3A-219ENST00000560414 NDUFC2O95298 119 aa8.49□□□□□ -1.05
IDH3A-219ENST00000560414 S100A7L2Q5SY68 101 aa8.49□□□□□ -1.05
IDH3A-219ENST00000560414 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
IDH3A-219ENST00000560414 IGLV6-57P01721 117 aa8.48□□□□□ -1.05
IDH3A-219ENST00000560414 COA6Q5JTJ3 125 aaKnown RBP8.48□□□□□ -1.05
IDH3A-219ENST00000560414 LITAFQ99732 161 aa8.48□□□□□ -1.05
IDH3A-219ENST00000560414 TTTY13Q9BZ97 58 aa8.48□□□□□ -1.05
IDH3A-219ENST00000560414 KRTDAPP60985 99 aa8.47□□□□□ -1.05
IDH3A-219ENST00000560414 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.06
IDH3A-219ENST00000560414 Q9BRP9 147 aa8.46□□□□□ -1.06
IDH3A-219ENST00000560414 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
IDH3A-219ENST00000560414 Q6ZRX8 168 aa8.45□□□□□ -1.06
IDH3A-219ENST00000560414 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
IDH3A-219ENST00000560414 TRAV23DV6A0A075B6W5 121 aa8.44□□□□□ -1.06
IDH3A-219ENST00000560414 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
IDH3A-219ENST00000560414 TIMM17BO60830 172 aa8.43□□□□□ -1.06
IDH3A-219ENST00000560414 Q8NBF4 154 aa8.43□□□□□ -1.06
IDH3A-219ENST00000560414 ZNF73O43830 326 aaPredicted RBP8.42□□□□□ -1.06
IDH3A-219ENST00000560414 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
IDH3A-219ENST00000560414 CTAG1AP78358 180 aa8.41□□□□□ -1.06
IDH3A-219ENST00000560414 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
IDH3A-219ENST00000560414 OR13C6PQ8NH95 151 aa8.41□□□□□ -1.06
IDH3A-219ENST00000560414 SPANXCQ9NY87 97 aa8.41□□□□□ -1.06
IDH3A-219ENST00000560414 IGLV7-46A0A075B6I9 117 aa8.4□□□□□ -1.06
IDH3A-219ENST00000560414 IGLV9-49A0A0B4J1Y8 123 aa8.4□□□□□ -1.06
IDH3A-219ENST00000560414 MUC2Q02817 5179 aa8.39□□□□□ -1.07
IDH3A-219ENST00000560414 C20orf202A1L168 122 aa8.39□□□□□ -1.07
IDH3A-219ENST00000560414 MOBPQ13875 183 aa8.39□□□□□ -1.07
IDH3A-219ENST00000560414 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
IDH3A-219ENST00000560414 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
IDH3A-219ENST00000560414 ST20-AS1Q8NBB2 130 aa8.37□□□□□ -1.07
IDH3A-219ENST00000560414 HINT1P49773 126 aaPredicted RBP8.36□□□□□ -1.07
IDH3A-219ENST00000560414 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
IDH3A-219ENST00000560414 TPRXLQ17RH7 258 aa8.35□□□□□ -1.07
IDH3A-219ENST00000560414 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
IDH3A-219ENST00000560414 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
IDH3A-219ENST00000560414 CBY1Q9Y3M2 126 aa8.35□□□□□ -1.07
IDH3A-219ENST00000560414 SPINK1P00995 79 aa8.34□□□□□ -1.07
IDH3A-219ENST00000560414 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
IDH3A-219ENST00000560414 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
IDH3A-219ENST00000560414 C6orf99Q4VX62 202 aa8.32□□□□□ -1.08
IDH3A-219ENST00000560414 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
IDH3A-219ENST00000560414 HIST3H2BBQ8N257 126 aa8.32□□□□□ -1.08
IDH3A-219ENST00000560414 S100A1P23297 94 aa8.3□□□□□ -1.08
IDH3A-219ENST00000560414 COX7BP24311 80 aa8.3□□□□□ -1.08
IDH3A-219ENST00000560414 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
IDH3A-219ENST00000560414 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
IDH3A-219ENST00000560414 HIST1H2BLQ99880 126 aa8.3□□□□□ -1.08
IDH3A-219ENST00000560414 DHRS4-AS1Q9P1J3 65 aa8.3□□□□□ -1.08
IDH3A-219ENST00000560414 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
IDH3A-219ENST00000560414 IFITM1P13164 125 aa8.29□□□□□ -1.08
IDH3A-219ENST00000560414 S100A2P29034 98 aa8.29□□□□□ -1.08
IDH3A-219ENST00000560414 AKR1D1P51857 326 aa8.29□□□□□ -1.08
IDH3A-219ENST00000560414 ELOF1P60002 83 aaKnown RBP8.29□□□□□ -1.08
IDH3A-219ENST00000560414 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
IDH3A-219ENST00000560414 A6NDN8 102 aa8.27□□□□□ -1.09
IDH3A-219ENST00000560414 PCP4P48539 62 aa8.27□□□□□ -1.09
IDH3A-219ENST00000560414 Q6ZVH6 145 aa8.27□□□□□ -1.09
IDH3A-219ENST00000560414 Q8N377 158 aa8.27□□□□□ -1.09
IDH3A-219ENST00000560414 COPS9Q8WXC6 57 aa8.27□□□□□ -1.09
IDH3A-219ENST00000560414 SPRR1BP22528 89 aa8.26□□□□□ -1.09
IDH3A-219ENST00000560414 RPS29P62273 56 aaKnown RBP8.26□□□□□ -1.09
IDH3A-219ENST00000560414 SNRPEP62304 92 aaKnown RBP8.26□□□□□ -1.09
IDH3A-219ENST00000560414 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
IDH3A-219ENST00000560414 DEFB105AQ8NG35 78 aa8.25□□□□□ -1.09
IDH3A-219ENST00000560414 S100A6P06703 90 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms