RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 UBE2AP49459 152 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 LINC00158P58513 81 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 TSPEAR-AS2P59090 65 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 RPL24P83731 157 aaKnown RBP3.88□□□□□ -1.79
IRF9-208ENST00000560311 MEIG1Q5JSS6 88 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 KRTAP13-1Q8IUC0 172 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 HSPB8Q9UJY1 196 aa3.88□□□□□ -1.79
IRF9-208ENST00000560311 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 SMIM13P0DJ93 91 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 FABP4P15090 132 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 PRLHP81277 87 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 PMCHL2Q9BQD1 86 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 NDUFA12Q9UI09 145 aa3.87□□□□□ -1.79
IRF9-208ENST00000560311 A0A087X002 238 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 M0R378 163 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 NCR3O14931 201 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 DPM2O94777 84 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 HERVK_113P61574 105 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 FAM19A1Q7Z5A9 133 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 MIR7-3HGQ8N6C7 128 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 SS18L2Q9UHA2 77 aa3.86□□□□□ -1.79
IRF9-208ENST00000560311 MYMXA0A1B0GTQ4 84 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 LEPROTO15243 131 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 IGKCP01834 107 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 PLEKHB2Q96CS7 222 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BNQ99877 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 HIST1H2BMQ99879 126 aa3.85□□□□□ -1.79
IRF9-208ENST00000560311 J3QQQ9 107 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 K7ERU9 68 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 M0R143 59 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 PRYO14603 147 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 CRYGAP11844 174 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 LGALS3P17931 250 aaKnown RBP3.84□□□□□ -1.79
IRF9-208ENST00000560311 NMUP48645 174 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 TAL2Q16559 108 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 DAND5Q8N907 189 aa3.84□□□□□ -1.79
IRF9-208ENST00000560311 FAM229BQ4G0N7 80 aa3.83□□□□□ -1.8
IRF9-208ENST00000560311 OCIAD2Q56VL3 154 aa3.83□□□□□ -1.8
IRF9-208ENST00000560311 HIGD2AQ9BW72 106 aa3.83□□□□□ -1.8
IRF9-208ENST00000560311 PPDPFQ9H3Y8 114 aa3.83□□□□□ -1.8
IRF9-208ENST00000560311 SPANXB1Q9NS25 103 aaPredicted RBP3.83□□□□□ -1.8
IRF9-208ENST00000560311 ANAPC11Q9NYG5 84 aa3.83□□□□□ -1.8
IRF9-208ENST00000560311 IGKV2D-26A0A0A0MRZ7 120 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 TRBV10-3A0A0K0K1G6 114 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 C20orf202A1L168 122 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 E9PLD3 99 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 SYS1-DBNDD2H3BUS1 97 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 KRTAP13-2Q52LG2 175 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 SIGMAR1Q99720 223 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 MIEN1Q9BRT3 115 aa3.82□□□□□ -1.8
IRF9-208ENST00000560311 A0A0J9YXY3 114 aa3.81□□□□□ -1.8
IRF9-208ENST00000560311 SPRR1AP35321 89 aa3.81□□□□□ -1.8
IRF9-208ENST00000560311 LINC01545Q5VT33 79 aa3.81□□□□□ -1.8
IRF9-208ENST00000560311 SNHG12Q9BXW3 62 aa3.81□□□□□ -1.8
IRF9-208ENST00000560311 LOC107984156A0A0G2JMH3 177 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 TRBV10-2A0A0K0K1G8 114 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 ETDCA0A1B0GVM5 59 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 NPC2P61916 151 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 SNRPEP62304 92 aaKnown RBP3.8□□□□□ -1.8
IRF9-208ENST00000560311 PRR4Q16378 134 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 ARL17AQ8IVW1 177 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 LINC00337Q8N6G1 96 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 LINC00304Q8N9R0 145 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 SPRR4Q96PI1 79 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 KCNQ1DNQ9H478 68 aa3.8□□□□□ -1.8
IRF9-208ENST00000560311 ZNF706Q9Y5V0 76 aaPredicted RBP3.8□□□□□ -1.8
IRF9-208ENST00000560311 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
IRF9-208ENST00000560311 C3orf79P0CE67 100 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 KRTDAPP60985 99 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 C4orf26Q17RF5 130 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 COA6Q5JTJ3 125 aaKnown RBP3.79□□□□□ -1.8
IRF9-208ENST00000560311 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 C3orf22Q8N5N4 141 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 OR13C6PQ8NH95 151 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 SMCR5Q8TEV8 140 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
IRF9-208ENST00000560311 MUC2Q02817 5179 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 TRAV23DV6A0A075B6W5 121 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 NDUFC2O95298 119 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 S100A7L2Q5SY68 101 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 ADAMTSL4-AS1Q5T5F5 129 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 LITAFQ99732 161 aa3.78□□□□□ -1.8
IRF9-208ENST00000560311 IGLV6-57P01721 117 aa3.77□□□□□ -1.81
IRF9-208ENST00000560311 IGKV2-30P06310 120 aa3.77□□□□□ -1.81
IRF9-208ENST00000560311 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms