RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
RABGGTA-213ENST00000560127 TMEM238C9JI98 176 aa7.11□□□□□ -1.27
RABGGTA-213ENST00000560127 NMUP48645 174 aa7.11□□□□□ -1.27
RABGGTA-213ENST00000560127 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
RABGGTA-213ENST00000560127 LOC107984156A0A0G2JMH3 177 aa7.1□□□□□ -1.27
RABGGTA-213ENST00000560127 M0R378 163 aa7.1□□□□□ -1.27
RABGGTA-213ENST00000560127 LGALS3P17931 250 aaKnown RBP7.1□□□□□ -1.27
RABGGTA-213ENST00000560127 ARL17AQ8IVW1 177 aa7.1□□□□□ -1.27
RABGGTA-213ENST00000560127 Q8NBF4 154 aa7.1□□□□□ -1.27
RABGGTA-213ENST00000560127 TMEM126AQ9H061 195 aa7.1□□□□□ -1.27
RABGGTA-213ENST00000560127 BOD1L2Q8IYS8 172 aa7.09□□□□□ -1.27
RABGGTA-213ENST00000560127 ATOH7Q8N100 152 aa7.09□□□□□ -1.27
RABGGTA-213ENST00000560127 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
RABGGTA-213ENST00000560127 NCR3O14931 201 aa7.08□□□□□ -1.28
RABGGTA-213ENST00000560127 RPL24P83731 157 aaKnown RBP7.08□□□□□ -1.28
RABGGTA-213ENST00000560127 SPRR4Q96PI1 79 aa7.08□□□□□ -1.28
RABGGTA-213ENST00000560127 SPINK1P00995 79 aa7.06□□□□□ -1.28
RABGGTA-213ENST00000560127 HIGD2AQ9BW72 106 aa7.06□□□□□ -1.28
RABGGTA-213ENST00000560127 C5orf52A6NGY3 159 aa7.05□□□□□ -1.28
RABGGTA-213ENST00000560127 KRTAP4-16G5E9R7 235 aaPredicted RBP7.05□□□□□ -1.28
RABGGTA-213ENST00000560127 NPC2P61916 151 aa7.05□□□□□ -1.28
RABGGTA-213ENST00000560127 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
RABGGTA-213ENST00000560127 TRBV10-3A0A0K0K1G6 114 aa7.04□□□□□ -1.28
RABGGTA-213ENST00000560127 ZNF815PA8K554 130 aa7.04□□□□□ -1.28
RABGGTA-213ENST00000560127 LINC00587B1AMM8 73 aa7.04□□□□□ -1.28
RABGGTA-213ENST00000560127 SPRR1AP35321 89 aa7.04□□□□□ -1.28
RABGGTA-213ENST00000560127 PCP2Q8IVA1 136 aa7.04□□□□□ -1.28
RABGGTA-213ENST00000560127 USH2AO75445 5202 aa7.03□□□□□ -1.28
RABGGTA-213ENST00000560127 C20orf202A1L168 122 aa7.03□□□□□ -1.28
RABGGTA-213ENST00000560127 TIMM17BO60830 172 aa7.03□□□□□ -1.28
RABGGTA-213ENST00000560127 Q8N377 158 aa7.03□□□□□ -1.28
RABGGTA-213ENST00000560127 LINC00308Q8TCZ7 52 aa7.02□□□□□ -1.29
RABGGTA-213ENST00000560127 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
RABGGTA-213ENST00000560127 TRBV10-2A0A0K0K1G8 114 aa7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 PRYO14603 147 aa7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 NDUFC2O95298 119 aa7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 IGLV6-57P01721 117 aa7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 S100A2P29034 98 aa7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 PCOTHQ58A44 107 aa7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 SPANXB1Q9NS25 103 aaPredicted RBP7.01□□□□□ -1.29
RABGGTA-213ENST00000560127 IGLV8-61A0A075B6I0 122 aa7□□□□□ -1.29
RABGGTA-213ENST00000560127 S100A6P06703 90 aa7□□□□□ -1.29
RABGGTA-213ENST00000560127 ZNF706Q9Y5V0 76 aaPredicted RBP7□□□□□ -1.29
RABGGTA-213ENST00000560127 M0R2T5 61 aa6.99□□□□□ -1.29
RABGGTA-213ENST00000560127 RPS29P62273 56 aaKnown RBP6.99□□□□□ -1.29
RABGGTA-213ENST00000560127 DDTP30046 118 aa6.98□□□□□ -1.29
RABGGTA-213ENST00000560127 SPANXDQ9BXN6 97 aa6.98□□□□□ -1.29
RABGGTA-213ENST00000560127 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
RABGGTA-213ENST00000560127 SLC25A20O43772 301 aa6.97□□□□□ -1.29
RABGGTA-213ENST00000560127 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
RABGGTA-213ENST00000560127 B5MCH6 92 aa6.96□□□□□ -1.3
RABGGTA-213ENST00000560127 MIEN1Q9BRT3 115 aa6.96□□□□□ -1.3
RABGGTA-213ENST00000560127 FCGBPQ9Y6R7 5405 aaPredicted RBP6.95□□□□□ -1.3
RABGGTA-213ENST00000560127 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
RABGGTA-213ENST00000560127 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
RABGGTA-213ENST00000560127 Q9BRP9 147 aa6.95□□□□□ -1.3
RABGGTA-213ENST00000560127 AKR1D1P51857 326 aa6.94□□□□□ -1.3
RABGGTA-213ENST00000560127 MOBPQ13875 183 aa6.94□□□□□ -1.3
RABGGTA-213ENST00000560127 TRAV23DV6A0A075B6W5 121 aa6.93□□□□□ -1.3
RABGGTA-213ENST00000560127 SCGB1D4Q6XE38 83 aa6.93□□□□□ -1.3
RABGGTA-213ENST00000560127 IGLV9-49A0A0B4J1Y8 123 aa6.92□□□□□ -1.3
RABGGTA-213ENST00000560127 ETDCA0A1B0GVM5 59 aa6.92□□□□□ -1.3
RABGGTA-213ENST00000560127 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
RABGGTA-213ENST00000560127 Q6ZRX8 168 aa6.92□□□□□ -1.3
RABGGTA-213ENST00000560127 SSBP3-AS1Q7Z2R9 100 aa6.92□□□□□ -1.3
RABGGTA-213ENST00000560127 ZNF73O43830 326 aaPredicted RBP6.91□□□□□ -1.3
RABGGTA-213ENST00000560127 S100A7L2Q5SY68 101 aa6.91□□□□□ -1.3
RABGGTA-213ENST00000560127 MUSTN1Q8IVN3 82 aa6.91□□□□□ -1.3
RABGGTA-213ENST00000560127 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.3
RABGGTA-213ENST00000560127 GAGE2AQ6NT46 116 aa6.9□□□□□ -1.3
RABGGTA-213ENST00000560127 IFITM1P13164 125 aa6.89□□□□□ -1.31
RABGGTA-213ENST00000560127 COX8AP10176 69 aa6.88□□□□□ -1.31
RABGGTA-213ENST00000560127 Q6ZVH6 145 aa6.88□□□□□ -1.31
RABGGTA-213ENST00000560127 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
RABGGTA-213ENST00000560127 HSBP1L1C9JCN9 74 aa6.87□□□□□ -1.31
RABGGTA-213ENST00000560127 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
RABGGTA-213ENST00000560127 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
RABGGTA-213ENST00000560127 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
RABGGTA-213ENST00000560127 TMA7Q9Y2S6 64 aaKnown RBP6.87□□□□□ -1.31
RABGGTA-213ENST00000560127 ST20-AS1Q8NBB2 130 aa6.86□□□□□ -1.31
RABGGTA-213ENST00000560127 PAM16Q9Y3D7 125 aa6.86□□□□□ -1.31
RABGGTA-213ENST00000560127 MACF1Q9UPN3 7388 aaKnown RBP6.86□□□□□ -1.31
RABGGTA-213ENST00000560127 PYY3Q5JQD4 70 aa6.85□□□□□ -1.31
RABGGTA-213ENST00000560127 C2orf91Q6ZV80 131 aa6.85□□□□□ -1.31
RABGGTA-213ENST00000560127 LINC00518Q8N0U6 118 aa6.85□□□□□ -1.31
RABGGTA-213ENST00000560127 DLEU1O43261 78 aa6.84□□□□□ -1.31
RABGGTA-213ENST00000560127 ELOF1P60002 83 aaKnown RBP6.84□□□□□ -1.31
RABGGTA-213ENST00000560127 C6orf99Q4VX62 202 aa6.84□□□□□ -1.31
RABGGTA-213ENST00000560127 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
RABGGTA-213ENST00000560127 C14orf144Q96I85 54 aa6.84□□□□□ -1.31
RABGGTA-213ENST00000560127 A4D1N5 150 aa6.83□□□□□ -1.32
RABGGTA-213ENST00000560127 S100A12P80511 92 aa6.83□□□□□ -1.32
RABGGTA-213ENST00000560127 COX7BP24311 80 aa6.81□□□□□ -1.32
RABGGTA-213ENST00000560127 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
RABGGTA-213ENST00000560127 COPS9Q8WXC6 57 aa6.81□□□□□ -1.32
RABGGTA-213ENST00000560127 VAMP8Q9BV40 100 aa6.81□□□□□ -1.32
RABGGTA-213ENST00000560127 A6NDN8 102 aa6.8□□□□□ -1.32
RABGGTA-213ENST00000560127 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
RABGGTA-213ENST00000560127 C12orf57Q99622 126 aa6.8□□□□□ -1.32
RABGGTA-213ENST00000560127 TRBV7-6A0A0J9YX20 115 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms