RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 DOPEY2Q9Y3R5 2298 aa2.41□□□□□ -2.02
HMGB3P26-201ENST00000560051 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.41□□□□□ -2.02
HMGB3P26-201ENST00000560051 IGLV5-48A0A075B6I7 105 aa2.4□□□□□ -2.03
HMGB3P26-201ENST00000560051 K7EQZ3 153 aa2.4□□□□□ -2.03
HMGB3P26-201ENST00000560051 PIGYQ3MUY2 71 aa2.4□□□□□ -2.03
HMGB3P26-201ENST00000560051 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
HMGB3P26-201ENST00000560051 CACNA1BQ00975 2339 aa2.4□□□□□ -2.03
HMGB3P26-201ENST00000560051 NOTCH2Q04721 2471 aa2.4□□□□□ -2.03
HMGB3P26-201ENST00000560051 TPRP12270 2363 aaKnown RBP2.39□□□□□ -2.03
HMGB3P26-201ENST00000560051 DSCR10P59022 87 aa2.39□□□□□ -2.03
HMGB3P26-201ENST00000560051 RPL39P62891 51 aaKnown RBP2.39□□□□□ -2.03
HMGB3P26-201ENST00000560051 MINOS1Q5TGZ0 78 aa2.39□□□□□ -2.03
HMGB3P26-201ENST00000560051 USMG5Q96IX5 58 aa2.39□□□□□ -2.03
HMGB3P26-201ENST00000560051 ICE1Q9Y2F5 2266 aa2.38□□□□□ -2.03
HMGB3P26-201ENST00000560051 PRB1P04280 392 aa2.38□□□□□ -2.03
HMGB3P26-201ENST00000560051 RPS27P42677 84 aaKnown RBP2.38□□□□□ -2.03
HMGB3P26-201ENST00000560051 Q6ZRN7 208 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P26-201ENST00000560051 RPL39LQ96EH5 51 aaKnown RBP2.38□□□□□ -2.03
HMGB3P26-201ENST00000560051 C6orf48Q9UBA6 75 aa2.38□□□□□ -2.03
HMGB3P26-201ENST00000560051 CCL22O00626 93 aa2.37□□□□□ -2.03
HMGB3P26-201ENST00000560051 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
HMGB3P26-201ENST00000560051 DEFB106AQ8N104 65 aa2.37□□□□□ -2.03
HMGB3P26-201ENST00000560051 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
HMGB3P26-201ENST00000560051 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
HMGB3P26-201ENST00000560051 KRTAP12-2P59991 146 aa2.36□□□□□ -2.03
HMGB3P26-201ENST00000560051 SPINK9Q5DT21 86 aa2.35□□□□□ -2.03
HMGB3P26-201ENST00000560051 PRO3102Q9H379 93 aa2.35□□□□□ -2.03
HMGB3P26-201ENST00000560051 WNK2Q9Y3S1 2297 aa2.34□□□□□ -2.03
HMGB3P26-201ENST00000560051 NAV3Q8IVL0 2385 aa2.34□□□□□ -2.03
HMGB3P26-201ENST00000560051 DEFB131AP59861 70 aa2.34□□□□□ -2.03
HMGB3P26-201ENST00000560051 PRR9Q5T870 116 aa2.34□□□□□ -2.03
HMGB3P26-201ENST00000560051 UBE2DNLQ8IWF7 75 aa2.34□□□□□ -2.03
HMGB3P26-201ENST00000560051 MRPL34Q9BQ48 92 aaKnown RBP2.34□□□□□ -2.03
HMGB3P26-201ENST00000560051 I3L2K1 104 aa2.33□□□□□ -2.04
HMGB3P26-201ENST00000560051 M0QY20 66 aa2.33□□□□□ -2.04
HMGB3P26-201ENST00000560051 PRB3Q04118 309 aaPredicted RBP2.33□□□□□ -2.04
HMGB3P26-201ENST00000560051 GPR179Q6PRD1 2367 aa2.33□□□□□ -2.04
HMGB3P26-201ENST00000560051 TMEM167AQ8TBQ9 72 aa2.32□□□□□ -2.04
HMGB3P26-201ENST00000560051 RPL37P61927 97 aaKnown RBP2.31□□□□□ -2.04
HMGB3P26-201ENST00000560051 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
HMGB3P26-201ENST00000560051 COL6A6A6NMZ7 2263 aa2.31□□□□□ -2.04
HMGB3P26-201ENST00000560051 FAM208BQ5VWN6 2430 aa2.3□□□□□ -2.04
HMGB3P26-201ENST00000560051 KRTAP13-3Q3SY46 172 aa2.29□□□□□ -2.04
HMGB3P26-201ENST00000560051 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
HMGB3P26-201ENST00000560051 DEFB123Q8N688 67 aa2.29□□□□□ -2.04
HMGB3P26-201ENST00000560051 K7EIM0 57 aa2.28□□□□□ -2.04
HMGB3P26-201ENST00000560051 PCOTHQ58A44 107 aa2.28□□□□□ -2.04
HMGB3P26-201ENST00000560051 WFDC10BQ8IUB3 73 aa2.28□□□□□ -2.04
HMGB3P26-201ENST00000560051 WFDC13Q8IUB5 93 aa2.28□□□□□ -2.04
HMGB3P26-201ENST00000560051 FLG2Q5D862 2391 aaPredicted RBP2.27□□□□□ -2.05
HMGB3P26-201ENST00000560051 IGFL1Q6UW32 110 aa2.27□□□□□ -2.05
HMGB3P26-201ENST00000560051 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
HMGB3P26-201ENST00000560051 H0YAA0 97 aa2.26□□□□□ -2.05
HMGB3P26-201ENST00000560051 LEAP2Q969E1 77 aa2.26□□□□□ -2.05
HMGB3P26-201ENST00000560051 OTOGLQ3ZCN5 2332 aa2.26□□□□□ -2.05
HMGB3P26-201ENST00000560051 LYNX1P0DP58 116 aa2.25□□□□□ -2.05
HMGB3P26-201ENST00000560051 ZDBF2Q9HCK1 2354 aa2.25□□□□□ -2.05
HMGB3P26-201ENST00000560051 PKDREJQ9NTG1 2253 aa2.25□□□□□ -2.05
HMGB3P26-201ENST00000560051 CACNA1GO43497 2377 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 H3BUA1 57 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 COX6A2Q02221 97 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 WT1-ASQ06250 92 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 DEFB109BQ30KR1 87 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 BRD3OSQ6XYD6 125 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
HMGB3P26-201ENST00000560051 Q6ZSA8 131 aa2.23□□□□□ -2.05
HMGB3P26-201ENST00000560051 H1FX-AS1Q4G0G2 97 aa2.22□□□□□ -2.05
HMGB3P26-201ENST00000560051 PTPRZ1P23471 2315 aaPredicted RBP2.21□□□□□ -2.06
HMGB3P26-201ENST00000560051 MMP24-AS1A0A0U1RRL7 71 aa2.2□□□□□ -2.06
HMGB3P26-201ENST00000560051 KRTAP1-4P0C5Y4 121 aa2.2□□□□□ -2.06
HMGB3P26-201ENST00000560051 KRTAP10-8P60410 259 aa2.2□□□□□ -2.06
HMGB3P26-201ENST00000560051 KAAG1Q9UBP8 84 aa2.2□□□□□ -2.06
HMGB3P26-201ENST00000560051 PIEZO2Q9H5I5 2752 aa2.19□□□□□ -2.06
HMGB3P26-201ENST00000560051 JMJD1CQ15652 2540 aa2.19□□□□□ -2.06
HMGB3P26-201ENST00000560051 RPL39P5Q59GN2 51 aa2.19□□□□□ -2.06
HMGB3P26-201ENST00000560051 IGF2RP11717 2491 aa2.18□□□□□ -2.06
HMGB3P26-201ENST00000560051 TOMM7Q9P0U1 55 aa2.18□□□□□ -2.06
HMGB3P26-201ENST00000560051 KLK9Q2XQG4 91 aa2.17□□□□□ -2.06
HMGB3P26-201ENST00000560051 K7EIL1 84 aa2.15□□□□□ -2.07
HMGB3P26-201ENST00000560051 DEFB130BP0DP73 79 aa2.15□□□□□ -2.07
HMGB3P26-201ENST00000560051 DEFB130AP0DP74 79 aa2.15□□□□□ -2.07
HMGB3P26-201ENST00000560051 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.07
HMGB3P26-201ENST00000560051 DEFB108AA8MXU0 73 aa2.14□□□□□ -2.07
HMGB3P26-201ENST00000560051 ROS1P08922 2347 aa2.14□□□□□ -2.07
HMGB3P26-201ENST00000560051 PCNX1Q96RV3 2341 aa2.13□□□□□ -2.07
HMGB3P26-201ENST00000560051 CLPSL2Q6UWE3 100 aa2.13□□□□□ -2.07
HMGB3P26-201ENST00000560051 ZNF462Q96JM2 2506 aa2.11□□□□□ -2.07
HMGB3P26-201ENST00000560051 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
HMGB3P26-201ENST00000560051 Q5VSD8 79 aa2.11□□□□□ -2.07
HMGB3P26-201ENST00000560051 CSPG4Q6UVK1 2322 aa2.1□□□□□ -2.07
HMGB3P26-201ENST00000560051 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
HMGB3P26-201ENST00000560051 SPTA1P02549 2419 aa2.09□□□□□ -2.07
HMGB3P26-201ENST00000560051 A8MTW9 85 aa2.09□□□□□ -2.07
HMGB3P26-201ENST00000560051 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
HMGB3P26-201ENST00000560051 NOP10Q9NPE3 64 aaKnown RBP2.08□□□□□ -2.08
HMGB3P26-201ENST00000560051 C2CD3Q4AC94 2353 aa2.07□□□□□ -2.08
HMGB3P26-201ENST00000560051 WNK1Q9H4A3 2382 aa2.07□□□□□ -2.08
HMGB3P26-201ENST00000560051 CACNA1HO95180 2353 aa2.07□□□□□ -2.08
HMGB3P26-201ENST00000560051 AKAP6Q13023 2319 aa2.06□□□□□ -2.08
HMGB3P26-201ENST00000560051 SPRR1AP35321 89 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms