RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
HMG20A-209ENST00000559728 SPANXB1Q9NS25 103 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-209ENST00000559728 TRBV10-2A0A0K0K1G8 114 aa5.5□□□□□ -1.53
HMG20A-209ENST00000559728 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
HMG20A-209ENST00000559728 IGLV7-43P04211 117 aa5.5□□□□□ -1.53
HMG20A-209ENST00000559728 MUSTN1Q8IVN3 82 aa5.5□□□□□ -1.53
HMG20A-209ENST00000559728 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 KRTAP4-16G5E9R7 235 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-209ENST00000559728 IFITM1P13164 125 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 SPRR1AP35321 89 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 Q6ZVH6 145 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 LINC00337Q8N6G1 96 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 TMEM126AQ9H061 195 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 KCNQ1DNQ9H478 68 aa5.49□□□□□ -1.53
HMG20A-209ENST00000559728 FLG2Q5D862 2391 aaPredicted RBP5.48□□□□□ -1.53
HMG20A-209ENST00000559728 BCE1O60756 84 aa5.48□□□□□ -1.53
HMG20A-209ENST00000559728 MIEN1Q9BRT3 115 aa5.48□□□□□ -1.53
HMG20A-209ENST00000559728 TNXBP22105 4242 aa5.48□□□□□ -1.53
HMG20A-209ENST00000559728 LCE1DQ5T752 114 aa5.47□□□□□ -1.53
HMG20A-209ENST00000559728 SLC25A34Q6PIV7 304 aa5.47□□□□□ -1.53
HMG20A-209ENST00000559728 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
HMG20A-209ENST00000559728 HIGD1BQ9P298 99 aa5.47□□□□□ -1.53
HMG20A-209ENST00000559728 HERC1Q15751 4861 aa5.47□□□□□ -1.53
HMG20A-209ENST00000559728 ZNF861PO60384 105 aa5.46□□□□□ -1.54
HMG20A-209ENST00000559728 DDTP30046 118 aa5.46□□□□□ -1.54
HMG20A-209ENST00000559728 REG3GQ6UW15 175 aa5.46□□□□□ -1.54
HMG20A-209ENST00000559728 PRYO14603 147 aa5.45□□□□□ -1.54
HMG20A-209ENST00000559728 SMIM6P0DI80 62 aa5.45□□□□□ -1.54
HMG20A-209ENST00000559728 A4D1N5 150 aa5.44□□□□□ -1.54
HMG20A-209ENST00000559728 H0Y9J4 135 aa5.44□□□□□ -1.54
HMG20A-209ENST00000559728 KRTAP1-4P0C5Y4 121 aa5.44□□□□□ -1.54
HMG20A-209ENST00000559728 PRLHP81277 87 aa5.44□□□□□ -1.54
HMG20A-209ENST00000559728 KRTAP3-1Q9BYR8 98 aa5.44□□□□□ -1.54
HMG20A-209ENST00000559728 TRAV23DV6A0A075B6W5 121 aa5.43□□□□□ -1.54
HMG20A-209ENST00000559728 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
HMG20A-209ENST00000559728 B5MCH6 92 aa5.43□□□□□ -1.54
HMG20A-209ENST00000559728 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
HMG20A-209ENST00000559728 LINC00518Q8N0U6 118 aa5.43□□□□□ -1.54
HMG20A-209ENST00000559728 HIST1H4GQ99525 98 aa5.43□□□□□ -1.54
HMG20A-209ENST00000559728 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
HMG20A-209ENST00000559728 FAM19A1Q7Z5A9 133 aa5.42□□□□□ -1.54
HMG20A-209ENST00000559728 COPS9Q8WXC6 57 aa5.42□□□□□ -1.54
HMG20A-209ENST00000559728 ZNF73O43830 326 aaPredicted RBP5.41□□□□□ -1.54
HMG20A-209ENST00000559728 CFC1BP0CG36 223 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 CFC1P0CG37 223 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
HMG20A-209ENST00000559728 UBE2AP49459 152 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 S100A12P80511 92 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 TAL2Q16559 108 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 SMCR5Q8TEV8 140 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 DIRC1Q969H9 104 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 LINC01600Q96MT4 127 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 C12orf57Q99622 126 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 Q9BRP9 147 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 PRO1933Q9H354 126 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 UQCR10Q9UDW1 63 aa5.41□□□□□ -1.54
HMG20A-209ENST00000559728 ERC2-IT1O76042 136 aa5.4□□□□□ -1.54
HMG20A-209ENST00000559728 OXTP01178 125 aa5.4□□□□□ -1.54
HMG20A-209ENST00000559728 FXYD2P54710 66 aa5.4□□□□□ -1.54
HMG20A-209ENST00000559728 KRTAP10-8P60410 259 aa5.4□□□□□ -1.54
HMG20A-209ENST00000559728 CEND1Q8N111 149 aa5.4□□□□□ -1.54
HMG20A-209ENST00000559728 OR13C6PQ8NH95 151 aa5.4□□□□□ -1.54
HMG20A-209ENST00000559728 TRAV13-2A0A0B4J235 113 aa5.39□□□□□ -1.55
HMG20A-209ENST00000559728 Q6ZRX8 168 aa5.39□□□□□ -1.55
HMG20A-209ENST00000559728 ETDCA0A1B0GVM5 59 aa5.38□□□□□ -1.55
HMG20A-209ENST00000559728 A6NDN8 102 aa5.38□□□□□ -1.55
HMG20A-209ENST00000559728 HSD52Q0P140 79 aa5.38□□□□□ -1.55
HMG20A-209ENST00000559728 C6orf99Q4VX62 202 aa5.38□□□□□ -1.55
HMG20A-209ENST00000559728 SMIM11BQ8TCY0 68 aa5.38□□□□□ -1.55
HMG20A-209ENST00000559728 ANAPC11Q9NYG5 84 aa5.38□□□□□ -1.55
HMG20A-209ENST00000559728 A0A087X002 238 aa5.37□□□□□ -1.55
HMG20A-209ENST00000559728 A0A0B4J2C4 111 aa5.37□□□□□ -1.55
HMG20A-209ENST00000559728 ELOF1P60002 83 aaKnown RBP5.37□□□□□ -1.55
HMG20A-209ENST00000559728 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
HMG20A-209ENST00000559728 HIGD2AQ9BW72 106 aa5.37□□□□□ -1.55
HMG20A-209ENST00000559728 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
HMG20A-209ENST00000559728 A0A1B0GWB2 263 aa5.36□□□□□ -1.55
HMG20A-209ENST00000559728 RPL13AP40429 203 aaKnown RBP5.36□□□□□ -1.55
HMG20A-209ENST00000559728 PRR26Q8N8Z3 221 aa5.36□□□□□ -1.55
HMG20A-209ENST00000559728 SPRR4Q96PI1 79 aa5.36□□□□□ -1.55
HMG20A-209ENST00000559728 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
HMG20A-209ENST00000559728 COX7BP24311 80 aa5.35□□□□□ -1.55
HMG20A-209ENST00000559728 KRTAP13-2Q52LG2 175 aa5.35□□□□□ -1.55
HMG20A-209ENST00000559728 K7ERJ3 54 aa5.34□□□□□ -1.55
HMG20A-209ENST00000559728 CTAG1AP78358 180 aa5.34□□□□□ -1.55
HMG20A-209ENST00000559728 BVES-AS1Q5T3Y7 98 aa5.34□□□□□ -1.55
HMG20A-209ENST00000559728 ST20-AS1Q8NBB2 130 aa5.34□□□□□ -1.55
HMG20A-209ENST00000559728 CBY1Q9Y3M2 126 aa5.34□□□□□ -1.55
HMG20A-209ENST00000559728 DMBT1Q9UGM3 2413 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-209ENST00000559728 KRTAP23-1A1A580 65 aa5.33□□□□□ -1.56
HMG20A-209ENST00000559728 LINC00483Q53H64 154 aa5.33□□□□□ -1.56
HMG20A-209ENST00000559728 LINC01547P58512 204 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-209ENST00000559728 FAM229BQ4G0N7 80 aa5.32□□□□□ -1.56
HMG20A-209ENST00000559728 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
HMG20A-209ENST00000559728 PRO1854Q9UHT4 67 aa5.32□□□□□ -1.56
HMG20A-209ENST00000559728 HINT1P49773 126 aaPredicted RBP5.31□□□□□ -1.56
HMG20A-209ENST00000559728 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
HMG20A-209ENST00000559728 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
HMG20A-209ENST00000559728 DHRS4-AS1Q9P1J3 65 aa5.31□□□□□ -1.56
HMG20A-209ENST00000559728 H7C2G1 150 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms