RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 C7orf33Q8WU49 177 aa7.16□□□□□ -1.26
SPG11-217ENST00000559511 RMI2Q96E14 147 aa7.16□□□□□ -1.26
SPG11-217ENST00000559511 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
SPG11-217ENST00000559511 M0R2N4 97 aa7.16□□□□□ -1.26
SPG11-217ENST00000559511 H3BQ85 93 aa7.15□□□□□ -1.26
SPG11-217ENST00000559511 KRTAP1-5Q9BYS1 174 aa7.15□□□□□ -1.26
SPG11-217ENST00000559511 KCNQ1DNQ9H478 68 aa7.15□□□□□ -1.26
SPG11-217ENST00000559511 PLA2G2DQ9UNK4 145 aa7.15□□□□□ -1.27
SPG11-217ENST00000559511 TENM2Q9NT68 2774 aa7.15□□□□□ -1.27
SPG11-217ENST00000559511 HIST1H4AP62805 103 aaKnown RBP7.14□□□□□ -1.27
SPG11-217ENST00000559511 KRTAP7-1Q8IUC3 87 aa7.14□□□□□ -1.27
SPG11-217ENST00000559511 DSCR8Q96T75 97 aa7.14□□□□□ -1.27
SPG11-217ENST00000559511 A0A087WVE0 104 aa7.13□□□□□ -1.27
SPG11-217ENST00000559511 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
SPG11-217ENST00000559511 B5MCH6 92 aa7.13□□□□□ -1.27
SPG11-217ENST00000559511 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
SPG11-217ENST00000559511 IGLV5-37A0A075B6J1 123 aa7.11□□□□□ -1.27
SPG11-217ENST00000559511 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
SPG11-217ENST00000559511 UBE2DNLQ8IWF7 75 aa7.11□□□□□ -1.27
SPG11-217ENST00000559511 GHRHP01286 108 aa7.1□□□□□ -1.27
SPG11-217ENST00000559511 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
SPG11-217ENST00000559511 IGLV1-50A0A075B6I6 118 aa7.1□□□□□ -1.27
SPG11-217ENST00000559511 LOC107984640A0A0U1RRK4 108 aa7.09□□□□□ -1.27
SPG11-217ENST00000559511 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
SPG11-217ENST00000559511 PDE6GP18545 87 aa7.09□□□□□ -1.27
SPG11-217ENST00000559511 ATP5EP2Q5VTU8 51 aa7.09□□□□□ -1.27
SPG11-217ENST00000559511 FAM19A5Q7Z5A7 132 aaPredicted RBP7.09□□□□□ -1.27
SPG11-217ENST00000559511 FBN3Q75N90 2809 aa7.09□□□□□ -1.27
SPG11-217ENST00000559511 NUPR2A6NF83 97 aa7.09□□□□□ -1.28
SPG11-217ENST00000559511 PRKDCP78527 4128 aaKnown RBP7.08□□□□□ -1.28
SPG11-217ENST00000559511 PRYO14603 147 aa7.08□□□□□ -1.28
SPG11-217ENST00000559511 SPRR1AP35321 89 aa7.08□□□□□ -1.28
SPG11-217ENST00000559511 Q6ZRX8 168 aa7.08□□□□□ -1.28
SPG11-217ENST00000559511 Q9BRP9 147 aa7.08□□□□□ -1.28
SPG11-217ENST00000559511 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
SPG11-217ENST00000559511 Q6ZVQ6 151 aa7.07□□□□□ -1.28
SPG11-217ENST00000559511 FAM19A1Q7Z5A9 133 aa7.07□□□□□ -1.28
SPG11-217ENST00000559511 MRPL55Q7Z7F7 128 aaKnown RBP7.07□□□□□ -1.28
SPG11-217ENST00000559511 DEFB105AQ8NG35 78 aa7.07□□□□□ -1.28
SPG11-217ENST00000559511 ATOX1O00244 68 aa7.06□□□□□ -1.28
SPG11-217ENST00000559511 Q8N377 158 aa7.06□□□□□ -1.28
SPG11-217ENST00000559511 SS18L2Q9UHA2 77 aa7.06□□□□□ -1.28
SPG11-217ENST00000559511 LINC01547P58512 204 aaPredicted RBP7.06□□□□□ -1.28
SPG11-217ENST00000559511 STARD9Q9P2P6 4700 aa7.05□□□□□ -1.28
SPG11-217ENST00000559511 PSCAO43653 123 aa7.05□□□□□ -1.28
SPG11-217ENST00000559511 C3orf22Q8N5N4 141 aa7.05□□□□□ -1.28
SPG11-217ENST00000559511 DHRS4-AS1Q9P1J3 65 aa7.05□□□□□ -1.28
SPG11-217ENST00000559511 A0A096LNI7 61 aa7.04□□□□□ -1.28
SPG11-217ENST00000559511 ETDCA0A1B0GVM5 59 aa7.04□□□□□ -1.28
SPG11-217ENST00000559511 CNBPP62633 177 aaKnown RBP7.04□□□□□ -1.28
SPG11-217ENST00000559511 UQCRQO14949 82 aa7.04□□□□□ -1.28
SPG11-217ENST00000559511 VPS13DQ5THJ4 4388 aa7.03□□□□□ -1.28
SPG11-217ENST00000559511 COX7CP15954 63 aa7.03□□□□□ -1.28
SPG11-217ENST00000559511 HAMPP81172 84 aa7.03□□□□□ -1.28
SPG11-217ENST00000559511 IGKV2-24A0A0C4DH68 120 aa7.03□□□□□ -1.28
SPG11-217ENST00000559511 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
SPG11-217ENST00000559511 ST20-AS1Q8NBB2 130 aa7.03□□□□□ -1.28
SPG11-217ENST00000559511 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.02□□□□□ -1.29
SPG11-217ENST00000559511 NBDYA0A0U1RRE5 68 aa7.02□□□□□ -1.29
SPG11-217ENST00000559511 C16orf90A8MZG2 172 aa7.02□□□□□ -1.29
SPG11-217ENST00000559511 ERC2-IT1O76042 136 aa7.02□□□□□ -1.29
SPG11-217ENST00000559511 C9orf153Q5TBE3 101 aa7.01□□□□□ -1.29
SPG11-217ENST00000559511 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
SPG11-217ENST00000559511 REG3GQ6UW15 175 aa7.01□□□□□ -1.29
SPG11-217ENST00000559511 IGLV5-48A0A075B6I7 105 aa7□□□□□ -1.29
SPG11-217ENST00000559511 UBE2BP63146 152 aa7□□□□□ -1.29
SPG11-217ENST00000559511 CXCL6P80162 114 aa7□□□□□ -1.29
SPG11-217ENST00000559511 SCXQ7RTU7 201 aa7□□□□□ -1.29
SPG11-217ENST00000559511 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
SPG11-217ENST00000559511 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
SPG11-217ENST00000559511 CHTF8P0CG12 524 aa6.98□□□□□ -1.29
SPG11-217ENST00000559511 TNP2Q05952 138 aa6.98□□□□□ -1.29
SPG11-217ENST00000559511 C14orf177Q52M58 125 aa6.98□□□□□ -1.29
SPG11-217ENST00000559511 Q6ZRN7 208 aaPredicted RBP6.98□□□□□ -1.29
SPG11-217ENST00000559511 C3orf84H3BNL1 204 aa6.97□□□□□ -1.29
SPG11-217ENST00000559511 CRYGAP11844 174 aa6.97□□□□□ -1.29
SPG11-217ENST00000559511 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
SPG11-217ENST00000559511 HECTD4Q9Y4D8 3996 aa6.96□□□□□ -1.3
SPG11-217ENST00000559511 SRRM2Q9UQ35 2752 aaKnown RBP6.96□□□□□ -1.3
SPG11-217ENST00000559511 PRLHP81277 87 aa6.95□□□□□ -1.3
SPG11-217ENST00000559511 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
SPG11-217ENST00000559511 KMT2AQ03164 3969 aa6.95□□□□□ -1.3
SPG11-217ENST00000559511 A0A1W2PNM2 257 aa6.95□□□□□ -1.3
SPG11-217ENST00000559511 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
SPG11-217ENST00000559511 PHF5AQ7RTV0 110 aaKnown RBP6.94□□□□□ -1.3
SPG11-217ENST00000559511 SMIM29Q86T20 159 aa6.94□□□□□ -1.3
SPG11-217ENST00000559511 C9orf163Q8N9P6 203 aa6.94□□□□□ -1.3
SPG11-217ENST00000559511 NREPQ16612 68 aa6.93□□□□□ -1.3
SPG11-217ENST00000559511 DNAH2Q9P225 4427 aa6.93□□□□□ -1.3
SPG11-217ENST00000559511 Q8N9L7 120 aa6.92□□□□□ -1.3
SPG11-217ENST00000559511 FUSP35637 526 aaKnown RBP eCLIP6.92□□□□□ -1.3
SPG11-217ENST00000559511 SEC61GP60059 68 aa6.91□□□□□ -1.3
SPG11-217ENST00000559511 Q8NBF4 154 aa6.91□□□□□ -1.3
SPG11-217ENST00000559511 PANO1I0J062 215 aa6.91□□□□□ -1.3
SPG11-217ENST00000559511 HIGD2AQ9BW72 106 aa6.91□□□□□ -1.3
SPG11-217ENST00000559511 Q6ZR54 194 aa6.9□□□□□ -1.3
SPG11-217ENST00000559511 A0A0G2JQZ4 141 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
SPG11-217ENST00000559511 TGP01266 2768 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms