RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
SNX1-207ENST00000559401 AKR1D1P51857 326 aa4.79□□□□□ -1.64
SNX1-207ENST00000559401 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
SNX1-207ENST00000559401 OR13C6PQ8NH95 151 aa4.79□□□□□ -1.64
SNX1-207ENST00000559401 LINC00308Q8TCZ7 52 aa4.79□□□□□ -1.64
SNX1-207ENST00000559401 B5MCH6 92 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 KRTAP4-16G5E9R7 235 aaPredicted RBP4.78□□□□□ -1.64
SNX1-207ENST00000559401 TIMM17BO60830 172 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 Q6ZRX8 168 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 HIST1H2BLQ99880 126 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 RETNLBQ9BQ08 111 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 SPANXCQ9NY87 97 aa4.78□□□□□ -1.64
SNX1-207ENST00000559401 LRP2P98164 4655 aa4.77□□□□□ -1.65
SNX1-207ENST00000559401 ZNF73O43830 326 aaPredicted RBP4.77□□□□□ -1.65
SNX1-207ENST00000559401 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
SNX1-207ENST00000559401 HINT1P49773 126 aaPredicted RBP4.77□□□□□ -1.65
SNX1-207ENST00000559401 JOSD1Q15040 202 aaPredicted RBP4.77□□□□□ -1.65
SNX1-207ENST00000559401 ANKRD39Q53RE8 183 aa4.77□□□□□ -1.65
SNX1-207ENST00000559401 LITAFQ99732 161 aa4.77□□□□□ -1.65
SNX1-207ENST00000559401 CBY1Q9Y3M2 126 aa4.77□□□□□ -1.65
SNX1-207ENST00000559401 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
SNX1-207ENST00000559401 C4orf48Q5BLP8 95 aa4.76□□□□□ -1.65
SNX1-207ENST00000559401 IGLV9-49A0A0B4J1Y8 123 aa4.75□□□□□ -1.65
SNX1-207ENST00000559401 Q8NBF4 154 aa4.75□□□□□ -1.65
SNX1-207ENST00000559401 Q9BRP9 147 aa4.75□□□□□ -1.65
SNX1-207ENST00000559401 MOBPQ13875 183 aa4.74□□□□□ -1.65
SNX1-207ENST00000559401 SPAG11AQ6PDA7 123 aa4.74□□□□□ -1.65
SNX1-207ENST00000559401 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
SNX1-207ENST00000559401 SPANXDQ9BXN6 97 aa4.74□□□□□ -1.65
SNX1-207ENST00000559401 HSBP1L1C9JCN9 74 aa4.73□□□□□ -1.65
SNX1-207ENST00000559401 SMIM6P0DI80 62 aa4.73□□□□□ -1.65
SNX1-207ENST00000559401 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
SNX1-207ENST00000559401 C9orf153Q5TBE3 101 aa4.73□□□□□ -1.65
SNX1-207ENST00000559401 PCP2Q8IVA1 136 aa4.73□□□□□ -1.65
SNX1-207ENST00000559401 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
SNX1-207ENST00000559401 A6NDN8 102 aa4.72□□□□□ -1.65
SNX1-207ENST00000559401 SCGB1D1O95968 90 aa4.72□□□□□ -1.65
SNX1-207ENST00000559401 IFITM1P13164 125 aa4.72□□□□□ -1.65
SNX1-207ENST00000559401 RNF213Q63HN8 5207 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 IGLV7-46A0A075B6I9 117 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 COX7BP24311 80 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 C6orf99Q4VX62 202 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 PYY3Q5JQD4 70 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 MUSTN1Q8IVN3 82 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 ST20-AS1Q8NBB2 130 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 DHRS4-AS1Q9P1J3 65 aa4.71□□□□□ -1.66
SNX1-207ENST00000559401 CTAG1AP78358 180 aa4.7□□□□□ -1.66
SNX1-207ENST00000559401 Q6ZVH6 145 aa4.7□□□□□ -1.66
SNX1-207ENST00000559401 C12orf57Q99622 126 aa4.7□□□□□ -1.66
SNX1-207ENST00000559401 CDIP1Q9H305 208 aa4.7□□□□□ -1.66
SNX1-207ENST00000559401 LPAP08519 4548 aa4.7□□□□□ -1.66
SNX1-207ENST00000559401 SPINK1P00995 79 aa4.69□□□□□ -1.66
SNX1-207ENST00000559401 ELOF1P60002 83 aaKnown RBP4.69□□□□□ -1.66
SNX1-207ENST00000559401 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
SNX1-207ENST00000559401 TAL2Q16559 108 aa4.68□□□□□ -1.66
SNX1-207ENST00000559401 SLC25A34Q6PIV7 304 aa4.68□□□□□ -1.66
SNX1-207ENST00000559401 DEFB105AQ8NG35 78 aa4.68□□□□□ -1.66
SNX1-207ENST00000559401 TRAV13-2A0A0B4J235 113 aa4.67□□□□□ -1.66
SNX1-207ENST00000559401 A0A1B0GWB2 263 aa4.67□□□□□ -1.66
SNX1-207ENST00000559401 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
SNX1-207ENST00000559401 Q1RN00 199 aa4.66□□□□□ -1.66
SNX1-207ENST00000559401 FP248Q71RG6 208 aaPredicted RBP4.66□□□□□ -1.66
SNX1-207ENST00000559401 LAMTOR3Q9UHA4 124 aa4.66□□□□□ -1.66
SNX1-207ENST00000559401 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
SNX1-207ENST00000559401 SPRR1BP22528 89 aa4.65□□□□□ -1.67
SNX1-207ENST00000559401 HRCT1Q6UXD1 115 aa4.65□□□□□ -1.67
SNX1-207ENST00000559401 VAMP8Q9BV40 100 aa4.65□□□□□ -1.67
SNX1-207ENST00000559401 TEX49A0A1B0GTD5 131 aa4.64□□□□□ -1.67
SNX1-207ENST00000559401 A4D1N5 150 aa4.64□□□□□ -1.67
SNX1-207ENST00000559401 SLC25A20O43772 301 aa4.64□□□□□ -1.67
SNX1-207ENST00000559401 RPS29P62273 56 aaKnown RBP4.64□□□□□ -1.67
SNX1-207ENST00000559401 SMIM11BQ8TCY0 68 aa4.64□□□□□ -1.67
SNX1-207ENST00000559401 HIST1H4GQ99525 98 aa4.64□□□□□ -1.67
SNX1-207ENST00000559401 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
SNX1-207ENST00000559401 VAMP3Q15836 100 aa4.63□□□□□ -1.67
SNX1-207ENST00000559401 Q8N377 158 aa4.63□□□□□ -1.67
SNX1-207ENST00000559401 TSTD3H0UI37 97 aa4.62□□□□□ -1.67
SNX1-207ENST00000559401 COX8AP10176 69 aa4.62□□□□□ -1.67
SNX1-207ENST00000559401 SPATA45Q537H7 98 aa4.62□□□□□ -1.67
SNX1-207ENST00000559401 LIMD2Q9BT23 127 aa4.62□□□□□ -1.67
SNX1-207ENST00000559401 PAM16Q9Y3D7 125 aa4.62□□□□□ -1.67
SNX1-207ENST00000559401 A0A0U1RQV1 116 aa4.61□□□□□ -1.67
SNX1-207ENST00000559401 PRO1933Q9H354 126 aa4.61□□□□□ -1.67
SNX1-207ENST00000559401 F8WEM9 126 aa4.6□□□□□ -1.67
SNX1-207ENST00000559401 KRTAP13-3Q3SY46 172 aa4.6□□□□□ -1.67
SNX1-207ENST00000559401 C14orf144Q96I85 54 aa4.6□□□□□ -1.67
SNX1-207ENST00000559401 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.67
SNX1-207ENST00000559401 PCP4L1A6NKN8 68 aa4.59□□□□□ -1.67
SNX1-207ENST00000559401 H7C2G1 150 aa4.59□□□□□ -1.67
SNX1-207ENST00000559401 LINC01547P58512 204 aaPredicted RBP4.59□□□□□ -1.67
SNX1-207ENST00000559401 SMIM29Q86T20 159 aa4.59□□□□□ -1.67
SNX1-207ENST00000559401 hADV29S1A0JD25 119 aa4.58□□□□□ -1.68
SNX1-207ENST00000559401 DLEU1O43261 78 aa4.58□□□□□ -1.68
SNX1-207ENST00000559401 LINC00575Q6W349 94 aa4.58□□□□□ -1.68
SNX1-207ENST00000559401 Q6ZQY7 126 aa4.58□□□□□ -1.68
SNX1-207ENST00000559401 RAB37Q96AX2 223 aa4.58□□□□□ -1.68
SNX1-207ENST00000559401 UQCR10Q9UDW1 63 aa4.58□□□□□ -1.68
SNX1-207ENST00000559401 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
SNX1-207ENST00000559401 BVES-AS1Q5T3Y7 98 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms