RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 SMIM11BQ8TCY0 68 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 FAM218AQ96MZ4 157 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 ORMDL1Q9P0S3 153 aa3.93□□□□□ -1.78
USP3-212ENST00000559276 A0A0U1RRA0 63 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 TMEM256-PLSCR3K7ERE1 68 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 CCKP06307 115 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 COX17Q14061 63 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 FHL2Q14192 279 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 C5orf47Q569G3 176 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 LYPD5Q6UWN5 251 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 Q9UF83 564 aa3.92□□□□□ -1.78
USP3-212ENST00000559276 TRGV2A0A075B6R0 118 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 A0A087WTM6 91 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 TRBV6-8A0A0A6YYG3 113 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 PDE6GP18545 87 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 LINC00158P58513 81 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 Q5VSD8 79 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 WFDC10BQ8IUB3 73 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 Q8IZM0 81 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 FAM30AQ9NZY2 134 aa3.91□□□□□ -1.78
USP3-212ENST00000559276 A0A087WYN8 130 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 A0A1B0GUV1 79 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 LECT2O14960 151 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 PAX4O43316 350 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 Q9HAA7 133 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 LINC00846Q9NV44 126 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 PRO0255Q9UI72 69 aa3.9□□□□□ -1.79
USP3-212ENST00000559276 DMBT1Q9UGM3 2413 aaPredicted RBP3.9□□□□□ -1.79
USP3-212ENST00000559276 LRCOL1A6NCL2 159 aa3.89□□□□□ -1.79
USP3-212ENST00000559276 SMR3BP02814 79 aaPredicted RBP3.89□□□□□ -1.79
USP3-212ENST00000559276 HAMPP81172 84 aa3.89□□□□□ -1.79
USP3-212ENST00000559276 SS18Q15532 418 aa3.89□□□□□ -1.79
USP3-212ENST00000559276 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
USP3-212ENST00000559276 C14orf132Q9NPU4 83 aa3.89□□□□□ -1.79
USP3-212ENST00000559276 LOC110117498A0A087WWA1 95 aa3.88□□□□□ -1.79
USP3-212ENST00000559276 TRGV4A0A0C4DH28 118 aa3.88□□□□□ -1.79
USP3-212ENST00000559276 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
USP3-212ENST00000559276 LINC00959A0A1B0GUT2 108 aa3.88□□□□□ -1.79
USP3-212ENST00000559276 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
USP3-212ENST00000559276 FAM19A5Q7Z5A7 132 aaPredicted RBP3.88□□□□□ -1.79
USP3-212ENST00000559276 TOMM7Q9P0U1 55 aa3.88□□□□□ -1.79
USP3-212ENST00000559276 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
USP3-212ENST00000559276 LOC107984640A0A0U1RRK4 108 aa3.87□□□□□ -1.79
USP3-212ENST00000559276 SEC61GP60059 68 aa3.87□□□□□ -1.79
USP3-212ENST00000559276 Q8N814 137 aa3.87□□□□□ -1.79
USP3-212ENST00000559276 DPH3Q96FX2 82 aa3.87□□□□□ -1.79
USP3-212ENST00000559276 LRP1Q07954 4544 aaKnown RBP3.86□□□□□ -1.79
USP3-212ENST00000559276 TRAV7A0A075B6U4 112 aa3.86□□□□□ -1.79
USP3-212ENST00000559276 NDUFC1O43677 76 aa3.86□□□□□ -1.79
USP3-212ENST00000559276 ATP5EP56381 51 aaPredicted RBP3.86□□□□□ -1.79
USP3-212ENST00000559276 CXCL6P80162 114 aa3.86□□□□□ -1.79
USP3-212ENST00000559276 IGLV4-60A0A075B6I1 120 aa3.85□□□□□ -1.79
USP3-212ENST00000559276 IGKV3D-7A0A0C4DH55 119 aa3.85□□□□□ -1.79
USP3-212ENST00000559276 NCR3O14931 201 aa3.85□□□□□ -1.79
USP3-212ENST00000559276 CD164L2Q6UWJ8 174 aa3.85□□□□□ -1.79
USP3-212ENST00000559276 Q8N3U1 123 aa3.85□□□□□ -1.79
USP3-212ENST00000559276 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
USP3-212ENST00000559276 IGLV5-52A0A0A0MRZ9 124 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 PFN2P35080 140 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
USP3-212ENST00000559276 RBM3P98179 157 aaKnown RBP3.84□□□□□ -1.79
USP3-212ENST00000559276 KLKP1Q107X0 134 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 LINC01556Q5JQF7 62 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 C9orf129Q5T035 196 aaKnown RBP3.84□□□□□ -1.79
USP3-212ENST00000559276 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 Q6ZSA8 131 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 SERP1Q9Y6X1 66 aa3.84□□□□□ -1.79
USP3-212ENST00000559276 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.8
USP3-212ENST00000559276 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
USP3-212ENST00000559276 TRBV7-6A0A0J9YX20 115 aa3.83□□□□□ -1.8
USP3-212ENST00000559276 ERC2-IT1O76042 136 aa3.83□□□□□ -1.8
USP3-212ENST00000559276 Q6ZQT0 140 aa3.83□□□□□ -1.8
USP3-212ENST00000559276 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 PKHD1L1Q86WI1 4243 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 A0A087WVE0 104 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 FAM236DA0A1B0GTK5 79 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 FAM229AH3BQW9 127 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 FAM236CP0DP71 79 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 KIAA0087Q14695 138 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
USP3-212ENST00000559276 DSCR8Q96T75 97 aa3.82□□□□□ -1.8
USP3-212ENST00000559276 IGKV3OR2-268A0A0C4DH90 116 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 A0A1B0GW54 56 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
USP3-212ENST00000559276 IGLV6-57P01721 117 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 SLPIP03973 132 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 XCL1P47992 114 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 C6orf99Q4VX62 202 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 LELP1Q5T871 98 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 KRTAP3-3Q9BYR6 98 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 KRTAP3-2Q9BYR7 98 aa3.81□□□□□ -1.8
USP3-212ENST00000559276 TRAV23DV6A0A075B6W5 121 aa3.8□□□□□ -1.8
USP3-212ENST00000559276 PSCAO43653 123 aa3.8□□□□□ -1.8
USP3-212ENST00000559276 LINC01547P58512 204 aaPredicted RBP3.8□□□□□ -1.8
USP3-212ENST00000559276 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
USP3-212ENST00000559276 CHCHD10Q8WYQ3 142 aaPredicted RBP3.8□□□□□ -1.8
USP3-212ENST00000559276 SMIM26A0A096LP01 95 aa3.79□□□□□ -1.8
USP3-212ENST00000559276 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
USP3-212ENST00000559276 TRBV7-4A0A0J9YYF1 115 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms