RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 CRYGAP11844 174 aa7.11□□□□□ -1.27
TPM1-216ENST00000558910 S100A2P29034 98 aa7.11□□□□□ -1.27
TPM1-216ENST00000558910 KRTAP13-1Q8IUC0 172 aa7.11□□□□□ -1.27
TPM1-216ENST00000558910 MIEN1Q9BRT3 115 aa7.11□□□□□ -1.27
TPM1-216ENST00000558910 LPAP08519 4548 aa7.11□□□□□ -1.27
TPM1-216ENST00000558910 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
TPM1-216ENST00000558910 LINC00587B1AMM8 73 aa7.1□□□□□ -1.27
TPM1-216ENST00000558910 PRR4Q16378 134 aa7.1□□□□□ -1.27
TPM1-216ENST00000558910 C20orf202A1L168 122 aa7.09□□□□□ -1.27
TPM1-216ENST00000558910 C3orf79P0CE67 100 aa7.09□□□□□ -1.27
TPM1-216ENST00000558910 TTTY13Q9BZ97 58 aa7.09□□□□□ -1.27
TPM1-216ENST00000558910 A0A0J9YXY3 114 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 ETDCA0A1B0GVM5 59 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 E9PLD3 99 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 NMUP48645 174 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 PPDPFQ9H3Y8 114 aa7.08□□□□□ -1.28
TPM1-216ENST00000558910 IGKV2D-26A0A0A0MRZ7 120 aa7.07□□□□□ -1.28
TPM1-216ENST00000558910 PRYO14603 147 aa7.07□□□□□ -1.28
TPM1-216ENST00000558910 DDTP30046 118 aa7.07□□□□□ -1.28
TPM1-216ENST00000558910 ADAMTSL4-AS1Q5T5F5 129 aa7.07□□□□□ -1.28
TPM1-216ENST00000558910 KRTAP5-3Q6L8H2 238 aa7.07□□□□□ -1.28
TPM1-216ENST00000558910 PET117Q6UWS5 81 aa7.07□□□□□ -1.28
TPM1-216ENST00000558910 COA6Q5JTJ3 125 aaKnown RBP7.06□□□□□ -1.28
TPM1-216ENST00000558910 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
TPM1-216ENST00000558910 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
TPM1-216ENST00000558910 SOSTDC1Q6X4U4 206 aa7.06□□□□□ -1.28
TPM1-216ENST00000558910 C3orf22Q8N5N4 141 aa7.06□□□□□ -1.28
TPM1-216ENST00000558910 RNF213Q63HN8 5207 aa7.05□□□□□ -1.28
TPM1-216ENST00000558910 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
TPM1-216ENST00000558910 SMCR5Q8TEV8 140 aa7.05□□□□□ -1.28
TPM1-216ENST00000558910 S100A12P80511 92 aa7.04□□□□□ -1.28
TPM1-216ENST00000558910 RETNLBQ9BQ08 111 aa7.04□□□□□ -1.28
TPM1-216ENST00000558910 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
TPM1-216ENST00000558910 KCNQ1DNQ9H478 68 aa7.03□□□□□ -1.28
TPM1-216ENST00000558910 B5MCH6 92 aa7.02□□□□□ -1.29
TPM1-216ENST00000558910 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.29
TPM1-216ENST00000558910 SPRR4Q96PI1 79 aa7.02□□□□□ -1.29
TPM1-216ENST00000558910 SPANXB1Q9NS25 103 aaPredicted RBP7.02□□□□□ -1.29
TPM1-216ENST00000558910 GAGE2AQ6NT46 116 aa7.01□□□□□ -1.29
TPM1-216ENST00000558910 TRAV23DV6A0A075B6W5 121 aa7□□□□□ -1.29
TPM1-216ENST00000558910 ERC2-IT1O76042 136 aa7□□□□□ -1.29
TPM1-216ENST00000558910 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
TPM1-216ENST00000558910 SCGB1D4Q6XE38 83 aa7□□□□□ -1.29
TPM1-216ENST00000558910 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
TPM1-216ENST00000558910 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
TPM1-216ENST00000558910 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
TPM1-216ENST00000558910 HSBP1L1C9JCN9 74 aa6.99□□□□□ -1.29
TPM1-216ENST00000558910 SPRR1AP35321 89 aa6.99□□□□□ -1.29
TPM1-216ENST00000558910 LITAFQ99732 161 aa6.99□□□□□ -1.29
TPM1-216ENST00000558910 ZNF706Q9Y5V0 76 aaPredicted RBP6.99□□□□□ -1.29
TPM1-216ENST00000558910 IGLV9-49A0A0B4J1Y8 123 aa6.98□□□□□ -1.29
TPM1-216ENST00000558910 LOC107984156A0A0G2JMH3 177 aa6.98□□□□□ -1.29
TPM1-216ENST00000558910 KRTAP4-16G5E9R7 235 aaPredicted RBP6.98□□□□□ -1.29
TPM1-216ENST00000558910 NDUFC2O95298 119 aa6.98□□□□□ -1.29
TPM1-216ENST00000558910 SNRPEP62304 92 aaKnown RBP6.98□□□□□ -1.29
TPM1-216ENST00000558910 ARL17AQ8IVW1 177 aa6.98□□□□□ -1.29
TPM1-216ENST00000558910 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
TPM1-216ENST00000558910 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
TPM1-216ENST00000558910 Q9BRP9 147 aa6.97□□□□□ -1.29
TPM1-216ENST00000558910 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.3
TPM1-216ENST00000558910 HIST3H2BBQ8N257 126 aa6.96□□□□□ -1.3
TPM1-216ENST00000558910 TIMM17BO60830 172 aa6.95□□□□□ -1.3
TPM1-216ENST00000558910 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
TPM1-216ENST00000558910 Q8NBF4 154 aa6.95□□□□□ -1.3
TPM1-216ENST00000558910 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
TPM1-216ENST00000558910 SCGB1D1O95968 90 aa6.94□□□□□ -1.3
TPM1-216ENST00000558910 MOBPQ13875 183 aa6.94□□□□□ -1.3
TPM1-216ENST00000558910 Q6ZRX8 168 aa6.94□□□□□ -1.3
TPM1-216ENST00000558910 HIST1H2BLQ99880 126 aa6.94□□□□□ -1.3
TPM1-216ENST00000558910 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
TPM1-216ENST00000558910 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
TPM1-216ENST00000558910 JOSD1Q15040 202 aaPredicted RBP6.92□□□□□ -1.3
TPM1-216ENST00000558910 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
TPM1-216ENST00000558910 MUSTN1Q8IVN3 82 aa6.92□□□□□ -1.3
TPM1-216ENST00000558910 A6NDN8 102 aa6.91□□□□□ -1.3
TPM1-216ENST00000558910 C5orf52A6NGY3 159 aa6.91□□□□□ -1.3
TPM1-216ENST00000558910 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.3
TPM1-216ENST00000558910 COX7BP24311 80 aa6.89□□□□□ -1.31
TPM1-216ENST00000558910 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
TPM1-216ENST00000558910 DEFB105AQ8NG35 78 aa6.89□□□□□ -1.31
TPM1-216ENST00000558910 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
TPM1-216ENST00000558910 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
TPM1-216ENST00000558910 LINC00518Q8N0U6 118 aa6.88□□□□□ -1.31
TPM1-216ENST00000558910 CBY1Q9Y3M2 126 aa6.88□□□□□ -1.31
TPM1-216ENST00000558910 HRCT1Q6UXD1 115 aa6.87□□□□□ -1.31
TPM1-216ENST00000558910 SPAG11AQ6PDA7 123 aa6.86□□□□□ -1.31
TPM1-216ENST00000558910 IFITM1P13164 125 aa6.85□□□□□ -1.31
TPM1-216ENST00000558910 TAL2Q16559 108 aa6.85□□□□□ -1.31
TPM1-216ENST00000558910 Q1RN00 199 aa6.84□□□□□ -1.31
TPM1-216ENST00000558910 Q6ZVH6 145 aa6.84□□□□□ -1.31
TPM1-216ENST00000558910 C12orf57Q99622 126 aa6.84□□□□□ -1.31
TPM1-216ENST00000558910 DHRS4-AS1Q9P1J3 65 aa6.84□□□□□ -1.31
TPM1-216ENST00000558910 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
TPM1-216ENST00000558910 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
TPM1-216ENST00000558910 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
TPM1-216ENST00000558910 MUC2Q02817 5179 aa6.81□□□□□ -1.32
TPM1-216ENST00000558910 SPINK1P00995 79 aa6.81□□□□□ -1.32
TPM1-216ENST00000558910 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms