RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 SLC25A34Q6PIV7 304 aa4.47□□□□□ -1.69
TRAF3-206ENST00000558880 FAM19A5Q7Z5A7 132 aaPredicted RBP4.47□□□□□ -1.69
TRAF3-206ENST00000558880 MUSTN1Q8IVN3 82 aa4.47□□□□□ -1.69
TRAF3-206ENST00000558880 C7orf33Q8WU49 177 aa4.47□□□□□ -1.69
TRAF3-206ENST00000558880 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
TRAF3-206ENST00000558880 LINC00474Q9P2X8 69 aa4.47□□□□□ -1.69
TRAF3-206ENST00000558880 LINC00587B1AMM8 73 aa4.46□□□□□ -1.7
TRAF3-206ENST00000558880 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
TRAF3-206ENST00000558880 SCGB1D4Q6XE38 83 aa4.46□□□□□ -1.7
TRAF3-206ENST00000558880 M0QXV9 152 aa4.45□□□□□ -1.7
TRAF3-206ENST00000558880 NDUFC2O95298 119 aa4.45□□□□□ -1.7
TRAF3-206ENST00000558880 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
TRAF3-206ENST00000558880 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
TRAF3-206ENST00000558880 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
TRAF3-206ENST00000558880 MIEN1Q9BRT3 115 aa4.45□□□□□ -1.7
TRAF3-206ENST00000558880 TNXBP22105 4242 aa4.45□□□□□ -1.7
TRAF3-206ENST00000558880 IGLV1-50A0A075B6I6 118 aa4.44□□□□□ -1.7
TRAF3-206ENST00000558880 TMEM238C9JI98 176 aa4.44□□□□□ -1.7
TRAF3-206ENST00000558880 KRTAP4-16G5E9R7 235 aaPredicted RBP4.44□□□□□ -1.7
TRAF3-206ENST00000558880 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
TRAF3-206ENST00000558880 Q6ZVH6 145 aa4.44□□□□□ -1.7
TRAF3-206ENST00000558880 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
TRAF3-206ENST00000558880 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
TRAF3-206ENST00000558880 PKIGQ9Y2B9 76 aa4.44□□□□□ -1.7
TRAF3-206ENST00000558880 A4D1N5 150 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 GAGE10A6NGK3 116 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 KRTAP29-1A8MX34 341 aaPredicted RBP4.43□□□□□ -1.7
TRAF3-206ENST00000558880 NCR3O14931 201 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 IFITM1P13164 125 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 FXYD2P54710 66 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 S100A12P80511 92 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 KRTAP13-1Q8IUC0 172 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 MPLKIPQ8TAP9 179 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
TRAF3-206ENST00000558880 TRBV10-3A0A0K0K1G6 114 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 RPL37AP8A6NKH3 93 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 M0R378 163 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 SPRR1AP35321 89 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 CEND1Q8N111 149 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
TRAF3-206ENST00000558880 CFC1BP0CG36 223 aa4.41□□□□□ -1.7
TRAF3-206ENST00000558880 CFC1P0CG37 223 aa4.41□□□□□ -1.7
TRAF3-206ENST00000558880 RPL24P83731 157 aaKnown RBP4.41□□□□□ -1.7
TRAF3-206ENST00000558880 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
TRAF3-206ENST00000558880 TAL2Q16559 108 aa4.41□□□□□ -1.7
TRAF3-206ENST00000558880 DPH3Q96FX2 82 aa4.41□□□□□ -1.7
TRAF3-206ENST00000558880 KCNQ1DNQ9H478 68 aa4.41□□□□□ -1.7
TRAF3-206ENST00000558880 A0A1B0GWB2 263 aa4.4□□□□□ -1.71
TRAF3-206ENST00000558880 CTAG1AP78358 180 aa4.4□□□□□ -1.71
TRAF3-206ENST00000558880 HSD52Q0P140 79 aa4.4□□□□□ -1.71
TRAF3-206ENST00000558880 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.71
TRAF3-206ENST00000558880 SVIPQ8NHG7 77 aa4.4□□□□□ -1.71
TRAF3-206ENST00000558880 HIST1H4GQ99525 98 aa4.4□□□□□ -1.71
TRAF3-206ENST00000558880 LBHQ53QV2 105 aaPredicted RBP4.39□□□□□ -1.71
TRAF3-206ENST00000558880 NKAPP1Q8N9T2 125 aa4.39□□□□□ -1.71
TRAF3-206ENST00000558880 TMEM126AQ9H061 195 aa4.39□□□□□ -1.71
TRAF3-206ENST00000558880 DDTP30046 118 aa4.38□□□□□ -1.71
TRAF3-206ENST00000558880 IGKV2D-30A0A075B6S6 120 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 A0A0B4J2C4 111 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 K7ERJ3 54 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 BCE1O60756 84 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 IGLV7-43P04211 117 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 RPL37AP61513 92 aaKnown RBP4.37□□□□□ -1.71
TRAF3-206ENST00000558880 C1orf137Q5JT78 98 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
TRAF3-206ENST00000558880 TSTD3H0UI37 97 aa4.36□□□□□ -1.71
TRAF3-206ENST00000558880 HINT1P49773 126 aaPredicted RBP4.36□□□□□ -1.71
TRAF3-206ENST00000558880 UBE2BP63146 152 aa4.36□□□□□ -1.71
TRAF3-206ENST00000558880 REG3GQ6UW15 175 aa4.36□□□□□ -1.71
TRAF3-206ENST00000558880 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
TRAF3-206ENST00000558880 Q9BRP9 147 aa4.36□□□□□ -1.71
TRAF3-206ENST00000558880 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
TRAF3-206ENST00000558880 TRAV23DV6A0A075B6W5 121 aa4.35□□□□□ -1.71
TRAF3-206ENST00000558880 ZNF73O43830 326 aaPredicted RBP4.35□□□□□ -1.71
TRAF3-206ENST00000558880 ZNF861PO60384 105 aa4.35□□□□□ -1.71
TRAF3-206ENST00000558880 ERC2-IT1O76042 136 aa4.35□□□□□ -1.71
TRAF3-206ENST00000558880 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
TRAF3-206ENST00000558880 PRLHP81277 87 aa4.35□□□□□ -1.71
TRAF3-206ENST00000558880 TRAV13-2A0A0B4J235 113 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 A6NDN8 102 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 H0Y9J4 135 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 RPL13AP40429 203 aaKnown RBP4.34□□□□□ -1.71
TRAF3-206ENST00000558880 RPL28P46779 137 aaKnown RBP4.34□□□□□ -1.71
TRAF3-206ENST00000558880 C6orf99Q4VX62 202 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 SNHG12Q9BXW3 62 aa4.34□□□□□ -1.71
TRAF3-206ENST00000558880 NHP2Q9NX24 153 aaKnown RBP4.34□□□□□ -1.71
TRAF3-206ENST00000558880 ELOF1P60002 83 aaKnown RBP4.33□□□□□ -1.72
TRAF3-206ENST00000558880 S100A7L2Q5SY68 101 aa4.33□□□□□ -1.72
TRAF3-206ENST00000558880 PRO1854Q9UHT4 67 aa4.33□□□□□ -1.72
TRAF3-206ENST00000558880 TSPAN13O95857 204 aa4.32□□□□□ -1.72
TRAF3-206ENST00000558880 OXTP01178 125 aa4.32□□□□□ -1.72
TRAF3-206ENST00000558880 Q6ZRX8 168 aa4.32□□□□□ -1.72
TRAF3-206ENST00000558880 FAM19A1Q7Z5A9 133 aa4.32□□□□□ -1.72
TRAF3-206ENST00000558880 FAM218AQ96MZ4 157 aa4.32□□□□□ -1.72
TRAF3-206ENST00000558880 TRBV7-6A0A0J9YX20 115 aa4.31□□□□□ -1.72
TRAF3-206ENST00000558880 PCP4P48539 62 aa4.31□□□□□ -1.72
TRAF3-206ENST00000558880 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms