RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 BCORQ6W2J9 1755 aa-0.51□□□□□ -2.49
CASC4-206ENST00000558847 WFDC13Q8IUB5 93 aa-0.51□□□□□ -2.49
CASC4-206ENST00000558847 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.52□□□□□ -2.49
CASC4-206ENST00000558847 LRRC9Q6ZRR7 1453 aa-0.52□□□□□ -2.49
CASC4-206ENST00000558847 PLIN4Q96Q06 1357 aa-0.52□□□□□ -2.49
CASC4-206ENST00000558847 GAFA1Q96PS6 74 aa-0.52□□□□□ -2.49
CASC4-206ENST00000558847 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.52□□□□□ -2.49
CASC4-206ENST00000558847 IQCF6A8MYZ5 107 aa-0.53□□□□□ -2.49
CASC4-206ENST00000558847 SPRR2EP22531 72 aa-0.53□□□□□ -2.49
CASC4-206ENST00000558847 UBR3Q6ZT12 1888 aa-0.53□□□□□ -2.49
CASC4-206ENST00000558847 QSER1Q2KHR3 1735 aa-0.53□□□□□ -2.49
CASC4-206ENST00000558847 MXRA5Q9NR99 2828 aa-0.53□□□□□ -2.49
CASC4-206ENST00000558847 PVALEFA0A1B0GWK0 134 aa-0.54□□□□□ -2.5
CASC4-206ENST00000558847 SNRPFP62306 86 aaKnown RBP-0.54□□□□□ -2.5
CASC4-206ENST00000558847 MYMXA0A1B0GTQ4 84 aa-0.55□□□□□ -2.5
CASC4-206ENST00000558847 RABAC1Q9UI14 185 aa-0.55□□□□□ -2.5
CASC4-206ENST00000558847 NEXMIFQ5QGS0 1516 aa-0.55□□□□□ -2.5
CASC4-206ENST00000558847 LRRC7Q96NW7 1537 aa-0.55□□□□□ -2.5
CASC4-206ENST00000558847 SETD2Q9BYW2 2564 aaPredicted RBP-0.56□□□□□ -2.5
CASC4-206ENST00000558847 RYR3Q15413 4870 aa-0.56□□□□□ -2.5
CASC4-206ENST00000558847 KRTAP6-2Q3LI66 62 aa-0.56□□□□□ -2.5
CASC4-206ENST00000558847 LELP1Q5T871 98 aa-0.56□□□□□ -2.5
CASC4-206ENST00000558847 S100A16Q96FQ6 103 aaKnown RBP-0.56□□□□□ -2.5
CASC4-206ENST00000558847 RGPD8O14715 1765 aaPredicted RBP-0.56□□□□□ -2.5
CASC4-206ENST00000558847 RGPD5Q99666 1765 aa-0.56□□□□□ -2.5
CASC4-206ENST00000558847 PRKDCP78527 4128 aaKnown RBP-0.56□□□□□ -2.5
CASC4-206ENST00000558847 USH2AO75445 5202 aa-0.56□□□□□ -2.5
CASC4-206ENST00000558847 FLGP20930 4061 aaPredicted RBP-0.57□□□□□ -2.5
CASC4-206ENST00000558847 SVEP1Q4LDE5 3571 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 ABCC3O15438 1527 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 H0YGG7 62 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 K7EP34 96 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 LINC00643Q86TS7 51 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 HIVEP1P15822 2718 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 PREX1Q8TCU6 1659 aa-0.57□□□□□ -2.5
CASC4-206ENST00000558847 NDUFB1O75438 58 aa-0.58□□□□□ -2.5
CASC4-206ENST00000558847 RYR1P21817 5038 aa-0.58□□□□□ -2.5
CASC4-206ENST00000558847 TTC37Q6PGP7 1564 aa-0.58□□□□□ -2.5
CASC4-206ENST00000558847 ACYP1P07311 99 aa-0.59□□□□□ -2.5
CASC4-206ENST00000558847 PKHD1P08F94 4074 aa-0.59□□□□□ -2.5
CASC4-206ENST00000558847 ITPR3Q14573 2671 aa-0.6□□□□□ -2.5
CASC4-206ENST00000558847 KNL1Q8NG31 2342 aa-0.6□□□□□ -2.51
CASC4-206ENST00000558847 RGPD2P0DJD1 1756 aa-0.6□□□□□ -2.51
CASC4-206ENST00000558847 PTPN23Q9H3S7 1636 aa-0.6□□□□□ -2.51
CASC4-206ENST00000558847 LAMA2P24043 3122 aaKnown RBP-0.61□□□□□ -2.51
CASC4-206ENST00000558847 UBR4Q5T4S7 5183 aa-0.61□□□□□ -2.51
CASC4-206ENST00000558847 KIAA1109Q2LD37 5005 aa-0.61□□□□□ -2.51
CASC4-206ENST00000558847 SPTBN4Q9H254 2564 aa-0.61□□□□□ -2.51
CASC4-206ENST00000558847 RGPD4Q7Z3J3 1758 aa-0.61□□□□□ -2.51
CASC4-206ENST00000558847 FASNP49327 2511 aaKnown RBP-0.61□□□□□ -2.51
CASC4-206ENST00000558847 EPG5Q9HCE0 2579 aa-0.61□□□□□ -2.51
CASC4-206ENST00000558847 STARD9Q9P2P6 4700 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 HYDINQ4G0P3 5121 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 CICQ96RK0 1608 aaPredicted RBP-0.62□□□□□ -2.51
CASC4-206ENST00000558847 TRAV21A0A0B4J279 112 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 CEBPZOSA8MTT3 80 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 WFDC9Q8NEX5 89 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 SPRR2FQ96RM1 72 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 SPG11Q96JI7 2443 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 TACC2O95359 2948 aa-0.62□□□□□ -2.51
CASC4-206ENST00000558847 SONP18583 2426 aaKnown RBP-0.63□□□□□ -2.51
CASC4-206ENST00000558847 USP9YO00507 2555 aaPredicted RBP-0.63□□□□□ -2.51
CASC4-206ENST00000558847 ADAMTS12P58397 1594 aa-0.63□□□□□ -2.51
CASC4-206ENST00000558847 EPPK1P58107 5090 aaKnown RBP-0.63□□□□□ -2.51
CASC4-206ENST00000558847 MYO18BQ8IUG5 2567 aa-0.63□□□□□ -2.51
CASC4-206ENST00000558847 NDUFA3O95167 84 aa-0.64□□□□□ -2.51
CASC4-206ENST00000558847 UBR1Q8IWV7 1749 aa-0.64□□□□□ -2.51
CASC4-206ENST00000558847 MT1AP04731 61 aa-0.65□□□□□ -2.51
CASC4-206ENST00000558847 DEFA5Q01523 94 aa-0.65□□□□□ -2.51
CASC4-206ENST00000558847 DNAH6Q9C0G6 4158 aa-0.65□□□□□ -2.51
CASC4-206ENST00000558847 RGPD3A6NKT7 1758 aaPredicted RBP-0.65□□□□□ -2.51
CASC4-206ENST00000558847 RGPD1P0DJD0 1748 aa-0.66□□□□□ -2.51
CASC4-206ENST00000558847 BIRC6Q9NR09 4857 aa-0.66□□□□□ -2.52
CASC4-206ENST00000558847 ACACAQ13085 2346 aa-0.66□□□□□ -2.52
CASC4-206ENST00000558847 HTTP42858 3142 aa-0.67□□□□□ -2.52
CASC4-206ENST00000558847 TNRC18O15417 2968 aaPredicted RBP-0.67□□□□□ -2.52
CASC4-206ENST00000558847 KANTRA0A1W2PQU2 76 aa-0.67□□□□□ -2.52
CASC4-206ENST00000558847 C3orf79P0CE67 100 aa-0.67□□□□□ -2.52
CASC4-206ENST00000558847 RNF213Q63HN8 5207 aa-0.67□□□□□ -2.52
CASC4-206ENST00000558847 PDE4DIPQ5VU43 2346 aa-0.67□□□□□ -2.52
CASC4-206ENST00000558847 HECTD1Q9ULT8 2610 aa-0.68□□□□□ -2.52
CASC4-206ENST00000558847 LAMA1P25391 3075 aa-0.68□□□□□ -2.52
CASC4-206ENST00000558847 RYR2Q92736 4967 aa-0.68□□□□□ -2.52
CASC4-206ENST00000558847 NBPF19A0A087WUL8 3843 aa-0.68□□□□□ -2.52
CASC4-206ENST00000558847 URB2Q14146 1524 aaKnown RBP-0.69□□□□□ -2.52
CASC4-206ENST00000558847 AKAP13Q12802 2813 aa-0.69□□□□□ -2.52
CASC4-206ENST00000558847 NBASA2RRP1 2371 aa-0.69□□□□□ -2.52
CASC4-206ENST00000558847 SUPT6HQ7KZ85 1726 aaKnown RBP-0.69□□□□□ -2.52
CASC4-206ENST00000558847 TIAM2Q8IVF5 1701 aa-0.69□□□□□ -2.52
CASC4-206ENST00000558847 PRRC2CQ9Y520 2896 aaKnown RBP-0.69□□□□□ -2.52
CASC4-206ENST00000558847 MUC17Q685J3 4493 aa-0.69□□□□□ -2.52
CASC4-206ENST00000558847 UACAQ9BZF9 1416 aa-0.7□□□□□ -2.52
CASC4-206ENST00000558847 MT1HP80294 61 aa-0.7□□□□□ -2.52
CASC4-206ENST00000558847 PKHD1L1Q86WI1 4243 aa-0.7□□□□□ -2.52
CASC4-206ENST00000558847 DNAH3Q8TD57 4116 aa-0.7□□□□□ -2.52
CASC4-206ENST00000558847 MAP3K4Q9Y6R4 1608 aa-0.71□□□□□ -2.52
CASC4-206ENST00000558847 H3BNG1 76 aa-0.71□□□□□ -2.52
CASC4-206ENST00000558847 KIF14Q15058 1648 aa-0.71□□□□□ -2.52
CASC4-206ENST00000558847 TEP1Q99973 2627 aaKnown RBP-0.71□□□□□ -2.52
CASC4-206ENST00000558847 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms