RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SPRR1AP35321 89 aa4.64□□□□□ -1.67
TRAF3-205ENST00000558700 HERVK_113P61574 105 aa4.64□□□□□ -1.67
TRAF3-205ENST00000558700 FAM19A2Q8N3H0 131 aa4.64□□□□□ -1.67
TRAF3-205ENST00000558700 TRBV10-3A0A0K0K1G6 114 aa4.63□□□□□ -1.67
TRAF3-205ENST00000558700 LEPROTO15243 131 aa4.63□□□□□ -1.67
TRAF3-205ENST00000558700 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
TRAF3-205ENST00000558700 FAM218AQ96MZ4 157 aa4.63□□□□□ -1.67
TRAF3-205ENST00000558700 MIEN1Q9BRT3 115 aa4.63□□□□□ -1.67
TRAF3-205ENST00000558700 KCNQ1DNQ9H478 68 aa4.63□□□□□ -1.67
TRAF3-205ENST00000558700 TRBV10-2A0A0K0K1G8 114 aa4.62□□□□□ -1.67
TRAF3-205ENST00000558700 KRTAP4-16G5E9R7 235 aaPredicted RBP4.62□□□□□ -1.67
TRAF3-205ENST00000558700 SERF1AO75920 110 aa4.62□□□□□ -1.67
TRAF3-205ENST00000558700 NMUP48645 174 aa4.62□□□□□ -1.67
TRAF3-205ENST00000558700 TSPEAR-AS2P59090 65 aa4.62□□□□□ -1.67
TRAF3-205ENST00000558700 FP248Q71RG6 208 aaPredicted RBP4.62□□□□□ -1.67
TRAF3-205ENST00000558700 HSPB8Q9UJY1 196 aa4.62□□□□□ -1.67
TRAF3-205ENST00000558700 J3QQQ9 107 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 DPM2O94777 84 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 TRGC2P03986 189 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 LGALS3P17931 250 aaKnown RBP4.61□□□□□ -1.67
TRAF3-205ENST00000558700 DDTP30046 118 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 Q8NBF4 154 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 SMCR5Q8TEV8 140 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 PPDPFQ9H3Y8 114 aa4.61□□□□□ -1.67
TRAF3-205ENST00000558700 SPANXB1Q9NS25 103 aaPredicted RBP4.61□□□□□ -1.67
TRAF3-205ENST00000558700 LOC107984156A0A0G2JMH3 177 aa4.6□□□□□ -1.67
TRAF3-205ENST00000558700 SPINK1P00995 79 aa4.6□□□□□ -1.67
TRAF3-205ENST00000558700 IGKCP01834 107 aa4.6□□□□□ -1.67
TRAF3-205ENST00000558700 LINC01547P58512 204 aaPredicted RBP4.6□□□□□ -1.67
TRAF3-205ENST00000558700 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
TRAF3-205ENST00000558700 ARL17AQ8IVW1 177 aa4.6□□□□□ -1.67
TRAF3-205ENST00000558700 DAND5Q8N907 189 aa4.6□□□□□ -1.67
TRAF3-205ENST00000558700 NDUFC2O95298 119 aa4.59□□□□□ -1.67
TRAF3-205ENST00000558700 S100A7L2Q5SY68 101 aa4.59□□□□□ -1.67
TRAF3-205ENST00000558700 Q6ZRX8 168 aa4.59□□□□□ -1.67
TRAF3-205ENST00000558700 FABP4P15090 132 aa4.58□□□□□ -1.68
TRAF3-205ENST00000558700 MOBPQ13875 183 aa4.58□□□□□ -1.68
TRAF3-205ENST00000558700 JOSD1Q15040 202 aaPredicted RBP4.58□□□□□ -1.68
TRAF3-205ENST00000558700 LCE3BQ5TA77 95 aa4.58□□□□□ -1.68
TRAF3-205ENST00000558700 PMCHL2Q9BQD1 86 aa4.58□□□□□ -1.68
TRAF3-205ENST00000558700 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
TRAF3-205ENST00000558700 CBY1Q9Y3M2 126 aa4.58□□□□□ -1.68
TRAF3-205ENST00000558700 TRAV23DV6A0A075B6W5 121 aa4.57□□□□□ -1.68
TRAF3-205ENST00000558700 IGLV6-57P01721 117 aa4.57□□□□□ -1.68
TRAF3-205ENST00000558700 RPS29P62273 56 aaKnown RBP4.57□□□□□ -1.68
TRAF3-205ENST00000558700 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
TRAF3-205ENST00000558700 IGKV2D-30A0A075B6S6 120 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 ERC2-IT1O76042 136 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 SSBP3-AS1Q7Z2R9 100 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 Q9BRP9 147 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 KRTAP9-9Q9BYP9 154 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 MUC2Q02817 5179 aa4.56□□□□□ -1.68
TRAF3-205ENST00000558700 A0A0J9YXY3 114 aa4.55□□□□□ -1.68
TRAF3-205ENST00000558700 E9PLD3 99 aa4.55□□□□□ -1.68
TRAF3-205ENST00000558700 ZNF73O43830 326 aaPredicted RBP4.55□□□□□ -1.68
TRAF3-205ENST00000558700 NPC2P61916 151 aa4.55□□□□□ -1.68
TRAF3-205ENST00000558700 C9orf153Q5TBE3 101 aa4.55□□□□□ -1.68
TRAF3-205ENST00000558700 SLC25A20O43772 301 aa4.54□□□□□ -1.68
TRAF3-205ENST00000558700 HINT1P49773 126 aaPredicted RBP4.54□□□□□ -1.68
TRAF3-205ENST00000558700 ADAMTSL4-AS1Q5T5F5 129 aa4.54□□□□□ -1.68
TRAF3-205ENST00000558700 SOSTDC1Q6X4U4 206 aa4.54□□□□□ -1.68
TRAF3-205ENST00000558700 COLCA2A8K830 154 aa4.53□□□□□ -1.68
TRAF3-205ENST00000558700 SYS1-DBNDD2H3BUS1 97 aa4.53□□□□□ -1.68
TRAF3-205ENST00000558700 TIMM17BO60830 172 aa4.53□□□□□ -1.68
TRAF3-205ENST00000558700 Q8N377 158 aa4.53□□□□□ -1.68
TRAF3-205ENST00000558700 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
TRAF3-205ENST00000558700 FAT4Q6V0I7 4981 aa4.52□□□□□ -1.69
TRAF3-205ENST00000558700 ASB16-AS1Q495Z4 193 aa4.52□□□□□ -1.69
TRAF3-205ENST00000558700 SLC25A34Q6PIV7 304 aa4.52□□□□□ -1.69
TRAF3-205ENST00000558700 MUC17Q685J3 4493 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 ZNF815PA8K554 130 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 OR13C6PQ8NH95 151 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 LITAFQ99732 161 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 LIMD2Q9BT23 127 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 SPANXDQ9BXN6 97 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 DHRS4-AS1Q9P1J3 65 aa4.51□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BKO60814 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BJP06899 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BOP23527 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BBP33778 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BDP58876 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BCP62807 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST2H2BEQ16778 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.5□□□□□ -1.69
TRAF3-205ENST00000558700 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 SLC7A5P1Q8MH63 180 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 ST20-AS1Q8NBB2 130 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BHQ93079 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BNQ99877 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 HIST1H2BMQ99879 126 aa4.5□□□□□ -1.69
TRAF3-205ENST00000558700 ELOF1P60002 83 aaKnown RBP4.49□□□□□ -1.69
TRAF3-205ENST00000558700 SEC61GP60059 68 aa4.49□□□□□ -1.69
TRAF3-205ENST00000558700 SPRR1BP22528 89 aa4.48□□□□□ -1.69
TRAF3-205ENST00000558700 COX7BP24311 80 aa4.48□□□□□ -1.69
TRAF3-205ENST00000558700 NDUFV3P56181 108 aaKnown RBP4.48□□□□□ -1.69
TRAF3-205ENST00000558700 MTURNQ8N3F0 131 aa4.48□□□□□ -1.69
TRAF3-205ENST00000558700 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
TRAF3-205ENST00000558700 COPS9Q8WXC6 57 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms