RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
HERC1-202ENST00000558324 IGLV9-49A0A0B4J1Y8 123 aa6.82□□□□□ -1.32
HERC1-202ENST00000558324 NDUFC2O95298 119 aa6.82□□□□□ -1.32
HERC1-202ENST00000558324 Q6ZRX8 168 aa6.82□□□□□ -1.32
HERC1-202ENST00000558324 IGLV6-57P01721 117 aa6.81□□□□□ -1.32
HERC1-202ENST00000558324 CTAG1AP78358 180 aa6.81□□□□□ -1.32
HERC1-202ENST00000558324 MOBPQ13875 183 aa6.81□□□□□ -1.32
HERC1-202ENST00000558324 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
HERC1-202ENST00000558324 LINC00483Q53H64 154 aa6.81□□□□□ -1.32
HERC1-202ENST00000558324 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
HERC1-202ENST00000558324 ZNF815PA8K554 130 aa6.79□□□□□ -1.32
HERC1-202ENST00000558324 ZNF73O43830 326 aaPredicted RBP6.79□□□□□ -1.32
HERC1-202ENST00000558324 PET117Q6UWS5 81 aa6.79□□□□□ -1.32
HERC1-202ENST00000558324 TTTY13Q9BZ97 58 aa6.79□□□□□ -1.32
HERC1-202ENST00000558324 C3orf79P0CE67 100 aa6.78□□□□□ -1.32
HERC1-202ENST00000558324 KRTDAPP60985 99 aa6.78□□□□□ -1.32
HERC1-202ENST00000558324 OR13C6PQ8NH95 151 aa6.78□□□□□ -1.32
HERC1-202ENST00000558324 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
HERC1-202ENST00000558324 LITAFQ99732 161 aa6.78□□□□□ -1.32
HERC1-202ENST00000558324 A0A0U1RQV1 116 aa6.77□□□□□ -1.33
HERC1-202ENST00000558324 JOSD1Q15040 202 aaPredicted RBP6.77□□□□□ -1.33
HERC1-202ENST00000558324 ST20-AS1Q8NBB2 130 aa6.77□□□□□ -1.33
HERC1-202ENST00000558324 SPANXCQ9NY87 97 aa6.77□□□□□ -1.33
HERC1-202ENST00000558324 MUC17Q685J3 4493 aa6.77□□□□□ -1.33
HERC1-202ENST00000558324 SPINK1P00995 79 aa6.76□□□□□ -1.33
HERC1-202ENST00000558324 C9orf153Q5TBE3 101 aa6.76□□□□□ -1.33
HERC1-202ENST00000558324 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
HERC1-202ENST00000558324 TIMM17BO60830 172 aa6.75□□□□□ -1.33
HERC1-202ENST00000558324 S100A6P06703 90 aa6.75□□□□□ -1.33
HERC1-202ENST00000558324 HINT1P49773 126 aaPredicted RBP6.75□□□□□ -1.33
HERC1-202ENST00000558324 AKR1D1P51857 326 aa6.74□□□□□ -1.33
HERC1-202ENST00000558324 SSBP3-AS1Q7Z2R9 100 aa6.73□□□□□ -1.33
HERC1-202ENST00000558324 LINC00518Q8N0U6 118 aa6.73□□□□□ -1.33
HERC1-202ENST00000558324 CBY1Q9Y3M2 126 aa6.73□□□□□ -1.33
HERC1-202ENST00000558324 C20orf202A1L168 122 aa6.72□□□□□ -1.33
HERC1-202ENST00000558324 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
HERC1-202ENST00000558324 COA6Q5JTJ3 125 aaKnown RBP6.72□□□□□ -1.33
HERC1-202ENST00000558324 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
HERC1-202ENST00000558324 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
HERC1-202ENST00000558324 SPANXDQ9BXN6 97 aa6.72□□□□□ -1.33
HERC1-202ENST00000558324 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
HERC1-202ENST00000558324 Q8N377 158 aa6.71□□□□□ -1.34
HERC1-202ENST00000558324 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
HERC1-202ENST00000558324 SMIM6P0DI80 62 aa6.69□□□□□ -1.34
HERC1-202ENST00000558324 COX7BP24311 80 aa6.69□□□□□ -1.34
HERC1-202ENST00000558324 RPS29P62273 56 aaKnown RBP6.69□□□□□ -1.34
HERC1-202ENST00000558324 DHRS4-AS1Q9P1J3 65 aa6.69□□□□□ -1.34
HERC1-202ENST00000558324 SLC25A20O43772 301 aa6.68□□□□□ -1.34
HERC1-202ENST00000558324 C12orf57Q99622 126 aa6.68□□□□□ -1.34
HERC1-202ENST00000558324 FAT4Q6V0I7 4981 aa6.67□□□□□ -1.34
HERC1-202ENST00000558324 C5orf52A6NGY3 159 aa6.67□□□□□ -1.34
HERC1-202ENST00000558324 ELOF1P60002 83 aaKnown RBP6.67□□□□□ -1.34
HERC1-202ENST00000558324 SNRPEP62304 92 aaKnown RBP6.67□□□□□ -1.34
HERC1-202ENST00000558324 HRCT1Q6UXD1 115 aa6.67□□□□□ -1.34
HERC1-202ENST00000558324 PCP2Q8IVA1 136 aa6.67□□□□□ -1.34
HERC1-202ENST00000558324 DEFB105AQ8NG35 78 aa6.67□□□□□ -1.34
HERC1-202ENST00000558324 A6NDN8 102 aa6.66□□□□□ -1.34
HERC1-202ENST00000558324 SPRR1BP22528 89 aa6.66□□□□□ -1.34
HERC1-202ENST00000558324 TAL2Q16559 108 aa6.65□□□□□ -1.34
HERC1-202ENST00000558324 Q1RN00 199 aa6.65□□□□□ -1.34
HERC1-202ENST00000558324 SLC25A34Q6PIV7 304 aa6.65□□□□□ -1.34
HERC1-202ENST00000558324 LAMTOR3Q9UHA4 124 aa6.65□□□□□ -1.34
HERC1-202ENST00000558324 PCP4L1A6NKN8 68 aa6.64□□□□□ -1.35
HERC1-202ENST00000558324 IFITM1P13164 125 aa6.64□□□□□ -1.35
HERC1-202ENST00000558324 S100A2P29034 98 aa6.64□□□□□ -1.35
HERC1-202ENST00000558324 MUSTN1Q8IVN3 82 aa6.64□□□□□ -1.35
HERC1-202ENST00000558324 COPS9Q8WXC6 57 aa6.64□□□□□ -1.35
HERC1-202ENST00000558324 ASB16-AS1Q495Z4 193 aa6.63□□□□□ -1.35
HERC1-202ENST00000558324 A0A1B0GWB2 263 aa6.62□□□□□ -1.35
HERC1-202ENST00000558324 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
HERC1-202ENST00000558324 Q6ZVH6 145 aa6.62□□□□□ -1.35
HERC1-202ENST00000558324 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
HERC1-202ENST00000558324 LIMD2Q9BT23 127 aa6.61□□□□□ -1.35
HERC1-202ENST00000558324 TRBV7-6A0A0J9YX20 115 aa6.6□□□□□ -1.35
HERC1-202ENST00000558324 TEX49A0A1B0GTD5 131 aa6.6□□□□□ -1.35
HERC1-202ENST00000558324 HIST3H2BBQ8N257 126 aa6.6□□□□□ -1.35
HERC1-202ENST00000558324 HIST1H2BLQ99880 126 aa6.6□□□□□ -1.35
HERC1-202ENST00000558324 H7C2G1 150 aa6.59□□□□□ -1.35
HERC1-202ENST00000558324 SMIM11BQ8TCY0 68 aa6.59□□□□□ -1.35
HERC1-202ENST00000558324 TRAV13-2A0A0B4J235 113 aa6.58□□□□□ -1.36
HERC1-202ENST00000558324 A0A0G2JQZ4 141 aa6.58□□□□□ -1.36
HERC1-202ENST00000558324 HSBP1L1C9JCN9 74 aa6.58□□□□□ -1.36
HERC1-202ENST00000558324 XP32Q5T750 250 aa6.58□□□□□ -1.36
HERC1-202ENST00000558324 KRTAP4-1Q9BYQ7 146 aa6.58□□□□□ -1.36
HERC1-202ENST00000558324 PRO1933Q9H354 126 aa6.58□□□□□ -1.36
HERC1-202ENST00000558324 LINC01547P58512 204 aaPredicted RBP6.57□□□□□ -1.36
HERC1-202ENST00000558324 SMIM29Q86T20 159 aa6.57□□□□□ -1.36
HERC1-202ENST00000558324 IGLV5-48A0A075B6I7 105 aa6.56□□□□□ -1.36
HERC1-202ENST00000558324 C9orf92A6NGG3 77 aa6.56□□□□□ -1.36
HERC1-202ENST00000558324 A4D1N5 150 aa6.55□□□□□ -1.36
HERC1-202ENST00000558324 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
HERC1-202ENST00000558324 CD164Q04900 197 aa6.54□□□□□ -1.36
HERC1-202ENST00000558324 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
HERC1-202ENST00000558324 VAMP3Q15836 100 aa6.52□□□□□ -1.37
HERC1-202ENST00000558324 TSTD3H0UI37 97 aa6.51□□□□□ -1.37
HERC1-202ENST00000558324 SCGB1D1O95968 90 aa6.51□□□□□ -1.37
HERC1-202ENST00000558324 F8WEM9 126 aa6.5□□□□□ -1.37
HERC1-202ENST00000558324 PYY3Q5JQD4 70 aa6.5□□□□□ -1.37
HERC1-202ENST00000558324 LINC00575Q6W349 94 aa6.5□□□□□ -1.37
HERC1-202ENST00000558324 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms