RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 RBM3P98179 157 aaKnown RBP6.82□□□□□ -1.32
TPM1-210ENST00000558264 B9D2Q9BPU9 175 aa6.82□□□□□ -1.32
TPM1-210ENST00000558264 LINC00528Q8N1L1 170 aa6.82□□□□□ -1.32
TPM1-210ENST00000558264 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
TPM1-210ENST00000558264 IGKV2-24A0A0C4DH68 120 aa6.81□□□□□ -1.32
TPM1-210ENST00000558264 F8WDY8 70 aa6.81□□□□□ -1.32
TPM1-210ENST00000558264 J3QL48 77 aa6.81□□□□□ -1.32
TPM1-210ENST00000558264 A0A087WVE0 104 aa6.8□□□□□ -1.32
TPM1-210ENST00000558264 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
TPM1-210ENST00000558264 TLX1NBP0CAT3 122 aa6.8□□□□□ -1.32
TPM1-210ENST00000558264 CCDC179H3BU77 68 aa6.79□□□□□ -1.32
TPM1-210ENST00000558264 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.79□□□□□ -1.32
TPM1-210ENST00000558264 Q6ZQT0 140 aa6.79□□□□□ -1.32
TPM1-210ENST00000558264 DSCR8Q96T75 97 aa6.79□□□□□ -1.32
TPM1-210ENST00000558264 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
TPM1-210ENST00000558264 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
TPM1-210ENST00000558264 DNHD1Q96M86 4753 aa6.78□□□□□ -1.32
TPM1-210ENST00000558264 A0A096LNI7 61 aa6.77□□□□□ -1.33
TPM1-210ENST00000558264 TRBV7-6A0A0J9YX20 115 aa6.77□□□□□ -1.33
TPM1-210ENST00000558264 C3orf22Q8N5N4 141 aa6.77□□□□□ -1.33
TPM1-210ENST00000558264 LOC107984640A0A0U1RRK4 108 aa6.77□□□□□ -1.33
TPM1-210ENST00000558264 SMIM20Q8N5G0 67 aa6.77□□□□□ -1.33
TPM1-210ENST00000558264 IGLV1-50A0A075B6I6 118 aa6.76□□□□□ -1.33
TPM1-210ENST00000558264 HIST1H4AP62805 103 aaKnown RBP6.76□□□□□ -1.33
TPM1-210ENST00000558264 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
TPM1-210ENST00000558264 Q6JHZ5 121 aa6.76□□□□□ -1.33
TPM1-210ENST00000558264 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
TPM1-210ENST00000558264 CHTF8P0CG12 524 aa6.75□□□□□ -1.33
TPM1-210ENST00000558264 ST20-AS1Q8NBB2 130 aa6.75□□□□□ -1.33
TPM1-210ENST00000558264 Q9BRP9 147 aa6.75□□□□□ -1.33
TPM1-210ENST00000558264 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
TPM1-210ENST00000558264 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
TPM1-210ENST00000558264 ETDCA0A1B0GVM5 59 aa6.75□□□□□ -1.33
TPM1-210ENST00000558264 LOC110117498A0A087WWA1 95 aa6.74□□□□□ -1.33
TPM1-210ENST00000558264 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
TPM1-210ENST00000558264 B5MCH6 92 aa6.74□□□□□ -1.33
TPM1-210ENST00000558264 UBL5Q9BZL1 73 aa6.74□□□□□ -1.33
TPM1-210ENST00000558264 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
TPM1-210ENST00000558264 FUSP35637 526 aaKnown RBP eCLIP6.73□□□□□ -1.33
TPM1-210ENST00000558264 Q6ZRX8 168 aa6.73□□□□□ -1.33
TPM1-210ENST00000558264 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
TPM1-210ENST00000558264 ERC2-IT1O76042 136 aa6.73□□□□□ -1.33
TPM1-210ENST00000558264 KRTAP4-16G5E9R7 235 aaPredicted RBP6.73□□□□□ -1.33
TPM1-210ENST00000558264 Q8N377 158 aa6.73□□□□□ -1.33
TPM1-210ENST00000558264 IGLV5-37A0A075B6J1 123 aa6.72□□□□□ -1.33
TPM1-210ENST00000558264 TRBV7-4A0A0J9YYF1 115 aa6.72□□□□□ -1.33
TPM1-210ENST00000558264 UBE2BP63146 152 aa6.72□□□□□ -1.33
TPM1-210ENST00000558264 HAMPP81172 84 aa6.72□□□□□ -1.33
TPM1-210ENST00000558264 DYNC2H1Q8NCM8 4307 aaKnown RBP6.72□□□□□ -1.33
TPM1-210ENST00000558264 PRYO14603 147 aa6.72□□□□□ -1.33
TPM1-210ENST00000558264 SCXQ7RTU7 201 aa6.72□□□□□ -1.33
TPM1-210ENST00000558264 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
TPM1-210ENST00000558264 NUPR2A6NF83 97 aa6.71□□□□□ -1.34
TPM1-210ENST00000558264 Q6ZVQ6 151 aa6.71□□□□□ -1.34
TPM1-210ENST00000558264 PRLHP81277 87 aa6.71□□□□□ -1.34
TPM1-210ENST00000558264 C16orf90A8MZG2 172 aa6.7□□□□□ -1.34
TPM1-210ENST00000558264 SPRR1AP35321 89 aa6.7□□□□□ -1.34
TPM1-210ENST00000558264 LINC01547P58512 204 aaPredicted RBP6.7□□□□□ -1.34
TPM1-210ENST00000558264 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
TPM1-210ENST00000558264 REG3GQ6UW15 175 aa6.7□□□□□ -1.34
TPM1-210ENST00000558264 H3BQ85 93 aa6.69□□□□□ -1.34
TPM1-210ENST00000558264 C3orf84H3BNL1 204 aa6.69□□□□□ -1.34
TPM1-210ENST00000558264 GHRHP01286 108 aa6.69□□□□□ -1.34
TPM1-210ENST00000558264 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
TPM1-210ENST00000558264 KRTAP11-1Q8IUC1 163 aa6.69□□□□□ -1.34
TPM1-210ENST00000558264 DHRS4-AS1Q9P1J3 65 aa6.69□□□□□ -1.34
TPM1-210ENST00000558264 LRCOL1A6NCL2 159 aa6.68□□□□□ -1.34
TPM1-210ENST00000558264 PANO1I0J062 215 aa6.67□□□□□ -1.34
TPM1-210ENST00000558264 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
TPM1-210ENST00000558264 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
TPM1-210ENST00000558264 A0A0G2JQZ4 141 aa6.67□□□□□ -1.34
TPM1-210ENST00000558264 PDE6GP18545 87 aa6.67□□□□□ -1.34
TPM1-210ENST00000558264 SRRM2Q9UQ35 2752 aaKnown RBP6.66□□□□□ -1.34
TPM1-210ENST00000558264 HIGD2AQ9BW72 106 aa6.66□□□□□ -1.34
TPM1-210ENST00000558264 Q6ZRN7 208 aaPredicted RBP6.66□□□□□ -1.34
TPM1-210ENST00000558264 DPH3Q96FX2 82 aa6.65□□□□□ -1.34
TPM1-210ENST00000558264 C14orf177Q52M58 125 aa6.65□□□□□ -1.35
TPM1-210ENST00000558264 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.35
TPM1-210ENST00000558264 Q8N9L7 120 aa6.64□□□□□ -1.35
TPM1-210ENST00000558264 ATOX1O00244 68 aa6.64□□□□□ -1.35
TPM1-210ENST00000558264 TNP2Q05952 138 aa6.64□□□□□ -1.35
TPM1-210ENST00000558264 KMT2AQ03164 3969 aa6.64□□□□□ -1.35
TPM1-210ENST00000558264 C9orf163Q8N9P6 203 aa6.63□□□□□ -1.35
TPM1-210ENST00000558264 C9orf153Q5TBE3 101 aa6.63□□□□□ -1.35
TPM1-210ENST00000558264 TGP01266 2768 aa6.63□□□□□ -1.35
TPM1-210ENST00000558264 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
TPM1-210ENST00000558264 C1orf137Q5JT78 98 aa6.62□□□□□ -1.35
TPM1-210ENST00000558264 IGLV5-48A0A075B6I7 105 aa6.62□□□□□ -1.35
TPM1-210ENST00000558264 A0A1W2PNM2 257 aa6.62□□□□□ -1.35
TPM1-210ENST00000558264 C5orf47Q569G3 176 aa6.62□□□□□ -1.35
TPM1-210ENST00000558264 COX7CP15954 63 aa6.61□□□□□ -1.35
TPM1-210ENST00000558264 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.61□□□□□ -1.35
TPM1-210ENST00000558264 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
TPM1-210ENST00000558264 UQCRQO14949 82 aa6.6□□□□□ -1.35
TPM1-210ENST00000558264 NREPQ16612 68 aa6.6□□□□□ -1.35
TPM1-210ENST00000558264 CYSTM1Q9H1C7 97 aa6.6□□□□□ -1.35
TPM1-210ENST00000558264 SMIM29Q86T20 159 aa6.6□□□□□ -1.35
TPM1-210ENST00000558264 EPM2AB3EWF7 344 aa6.59□□□□□ -1.35
TPM1-210ENST00000558264 DNAH2Q9P225 4427 aa6.58□□□□□ -1.36
TPM1-210ENST00000558264 A0A087WTM6 91 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms