RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 SYS1-DBNDD2H3BUS1 97 aa5.12□□□□□ -1.59
SNRPA1-206ENST00000558059 NMUP48645 174 aa5.12□□□□□ -1.59
SNRPA1-206ENST00000558059 PRR4Q16378 134 aa5.12□□□□□ -1.59
SNRPA1-206ENST00000558059 HIGD2AQ9BW72 106 aa5.12□□□□□ -1.59
SNRPA1-206ENST00000558059 E9PLD3 99 aa5.11□□□□□ -1.59
SNRPA1-206ENST00000558059 LGALS3P17931 250 aaKnown RBP5.11□□□□□ -1.59
SNRPA1-206ENST00000558059 LINC00337Q8N6G1 96 aa5.11□□□□□ -1.59
SNRPA1-206ENST00000558059 A0A0J9YXY3 114 aa5.1□□□□□ -1.59
SNRPA1-206ENST00000558059 TRBV10-2A0A0K0K1G8 114 aa5.1□□□□□ -1.59
SNRPA1-206ENST00000558059 ADAMTSL4-AS1Q5T5F5 129 aa5.1□□□□□ -1.59
SNRPA1-206ENST00000558059 C3orf22Q8N5N4 141 aa5.1□□□□□ -1.59
SNRPA1-206ENST00000558059 LINC00304Q8N9R0 145 aa5.1□□□□□ -1.59
SNRPA1-206ENST00000558059 SPRR4Q96PI1 79 aa5.1□□□□□ -1.59
SNRPA1-206ENST00000558059 ETDCA0A1B0GVM5 59 aa5.09□□□□□ -1.59
SNRPA1-206ENST00000558059 COA6Q5JTJ3 125 aaKnown RBP5.09□□□□□ -1.59
SNRPA1-206ENST00000558059 LINC01545Q5VT33 79 aa5.09□□□□□ -1.59
SNRPA1-206ENST00000558059 SOSTDC1Q6X4U4 206 aa5.09□□□□□ -1.59
SNRPA1-206ENST00000558059 SMCR5Q8TEV8 140 aa5.09□□□□□ -1.59
SNRPA1-206ENST00000558059 B5MCH6 92 aa5.08□□□□□ -1.6
SNRPA1-206ENST00000558059 NDUFC2O95298 119 aa5.08□□□□□ -1.6
SNRPA1-206ENST00000558059 C3orf79P0CE67 100 aa5.08□□□□□ -1.6
SNRPA1-206ENST00000558059 DDTP30046 118 aa5.08□□□□□ -1.6
SNRPA1-206ENST00000558059 PET117Q6UWS5 81 aa5.08□□□□□ -1.6
SNRPA1-206ENST00000558059 SPANXB1Q9NS25 103 aaPredicted RBP5.08□□□□□ -1.6
SNRPA1-206ENST00000558059 IGLV6-57P01721 117 aa5.07□□□□□ -1.6
SNRPA1-206ENST00000558059 LITAFQ99732 161 aa5.07□□□□□ -1.6
SNRPA1-206ENST00000558059 MIEN1Q9BRT3 115 aa5.07□□□□□ -1.6
SNRPA1-206ENST00000558059 ZNF706Q9Y5V0 76 aaPredicted RBP5.07□□□□□ -1.6
SNRPA1-206ENST00000558059 ERC2-IT1O76042 136 aa5.06□□□□□ -1.6
SNRPA1-206ENST00000558059 NPC2P61916 151 aa5.06□□□□□ -1.6
SNRPA1-206ENST00000558059 CTAG1AP78358 180 aa5.06□□□□□ -1.6
SNRPA1-206ENST00000558059 S100A12P80511 92 aa5.06□□□□□ -1.6
SNRPA1-206ENST00000558059 PPDPFQ9H3Y8 114 aa5.06□□□□□ -1.6
SNRPA1-206ENST00000558059 TIMM17BO60830 172 aa5.05□□□□□ -1.6
SNRPA1-206ENST00000558059 LINC00483Q53H64 154 aa5.05□□□□□ -1.6
SNRPA1-206ENST00000558059 S100A7L2Q5SY68 101 aa5.05□□□□□ -1.6
SNRPA1-206ENST00000558059 RETNLBQ9BQ08 111 aa5.05□□□□□ -1.6
SNRPA1-206ENST00000558059 Q9BRP9 147 aa5.05□□□□□ -1.6
SNRPA1-206ENST00000558059 TTTY13Q9BZ97 58 aa5.05□□□□□ -1.6
SNRPA1-206ENST00000558059 MUC2Q02817 5179 aa5.04□□□□□ -1.6
SNRPA1-206ENST00000558059 KRTDAPP60985 99 aa5.04□□□□□ -1.6
SNRPA1-206ENST00000558059 Q6ZRX8 168 aa5.04□□□□□ -1.6
SNRPA1-206ENST00000558059 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
SNRPA1-206ENST00000558059 TRAV23DV6A0A075B6W5 121 aa5.03□□□□□ -1.6
SNRPA1-206ENST00000558059 ZNF815PA8K554 130 aa5.03□□□□□ -1.6
SNRPA1-206ENST00000558059 GAGE2AQ6NT46 116 aa5.03□□□□□ -1.6
SNRPA1-206ENST00000558059 SPAG11AQ6PDA7 123 aa5.03□□□□□ -1.6
SNRPA1-206ENST00000558059 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
SNRPA1-206ENST00000558059 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
SNRPA1-206ENST00000558059 ZNF73O43830 326 aaPredicted RBP5.02□□□□□ -1.61
SNRPA1-206ENST00000558059 ANKRD39Q53RE8 183 aa5.02□□□□□ -1.61
SNRPA1-206ENST00000558059 Q8NBF4 154 aa5.02□□□□□ -1.61
SNRPA1-206ENST00000558059 IGLV7-46A0A075B6I9 117 aa5□□□□□ -1.61
SNRPA1-206ENST00000558059 C20orf202A1L168 122 aa5□□□□□ -1.61
SNRPA1-206ENST00000558059 JOSD1Q15040 202 aaPredicted RBP5□□□□□ -1.61
SNRPA1-206ENST00000558059 ATOH7Q8N100 152 aa5□□□□□ -1.61
SNRPA1-206ENST00000558059 OR13C6PQ8NH95 151 aa5□□□□□ -1.61
SNRPA1-206ENST00000558059 IGLV9-49A0A0B4J1Y8 123 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 MOBPQ13875 183 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 TPRXLQ17RH7 258 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 SSBP3-AS1Q7Z2R9 100 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 ST20-AS1Q8NBB2 130 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 CBY1Q9Y3M2 126 aa4.99□□□□□ -1.61
SNRPA1-206ENST00000558059 C5orf52A6NGY3 159 aa4.98□□□□□ -1.61
SNRPA1-206ENST00000558059 SPINK1P00995 79 aa4.98□□□□□ -1.61
SNRPA1-206ENST00000558059 HINT1P49773 126 aaPredicted RBP4.98□□□□□ -1.61
SNRPA1-206ENST00000558059 SCGB1D4Q6XE38 83 aa4.98□□□□□ -1.61
SNRPA1-206ENST00000558059 PCP2Q8IVA1 136 aa4.98□□□□□ -1.61
SNRPA1-206ENST00000558059 LINC00518Q8N0U6 118 aa4.98□□□□□ -1.61
SNRPA1-206ENST00000558059 AKR1D1P51857 326 aa4.97□□□□□ -1.61
SNRPA1-206ENST00000558059 HIST3H2BBQ8N257 126 aa4.97□□□□□ -1.61
SNRPA1-206ENST00000558059 IFITM1P13164 125 aa4.96□□□□□ -1.62
SNRPA1-206ENST00000558059 S100A1P23297 94 aa4.96□□□□□ -1.62
SNRPA1-206ENST00000558059 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-206ENST00000558059 HIST1H2BLQ99880 126 aa4.96□□□□□ -1.62
SNRPA1-206ENST00000558059 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
SNRPA1-206ENST00000558059 SPRR1BP22528 89 aa4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 ELOF1P60002 83 aaKnown RBP4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 SNRPEP62304 92 aaKnown RBP4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 C6orf99Q4VX62 202 aa4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 Q6ZVH6 145 aa4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 MUSTN1Q8IVN3 82 aa4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 DHRS4-AS1Q9P1J3 65 aa4.95□□□□□ -1.62
SNRPA1-206ENST00000558059 COX7BP24311 80 aa4.94□□□□□ -1.62
SNRPA1-206ENST00000558059 C9orf153Q5TBE3 101 aa4.94□□□□□ -1.62
SNRPA1-206ENST00000558059 Q8N377 158 aa4.94□□□□□ -1.62
SNRPA1-206ENST00000558059 COPS9Q8WXC6 57 aa4.94□□□□□ -1.62
SNRPA1-206ENST00000558059 TRBV7-6A0A0J9YX20 115 aa4.93□□□□□ -1.62
SNRPA1-206ENST00000558059 S100A2P29034 98 aa4.93□□□□□ -1.62
SNRPA1-206ENST00000558059 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
SNRPA1-206ENST00000558059 A6NDN8 102 aa4.92□□□□□ -1.62
SNRPA1-206ENST00000558059 SLC25A20O43772 301 aa4.92□□□□□ -1.62
SNRPA1-206ENST00000558059 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
SNRPA1-206ENST00000558059 A0A1B0GWB2 263 aa4.91□□□□□ -1.62
SNRPA1-206ENST00000558059 S100A6P06703 90 aa4.91□□□□□ -1.62
SNRPA1-206ENST00000558059 FAT4Q6V0I7 4981 aa4.91□□□□□ -1.62
SNRPA1-206ENST00000558059 TRAV13-2A0A0B4J235 113 aa4.9□□□□□ -1.63
SNRPA1-206ENST00000558059 LINC01547P58512 204 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms