RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 TIMM17BO60830 172 aa9.61□□□□□ -0.87
NEDD4-212ENST00000557845 KRTDAPP60985 99 aa9.61□□□□□ -0.87
NEDD4-212ENST00000557845 LINC00483Q53H64 154 aa9.61□□□□□ -0.87
NEDD4-212ENST00000557845 GAGE2AQ6NT46 116 aa9.61□□□□□ -0.87
NEDD4-212ENST00000557845 TRAV23DV6A0A075B6W5 121 aa9.6□□□□□ -0.87
NEDD4-212ENST00000557845 ZNF815PA8K554 130 aa9.6□□□□□ -0.87
NEDD4-212ENST00000557845 LINC00308Q8TCZ7 52 aa9.6□□□□□ -0.87
NEDD4-212ENST00000557845 C4orf48Q5BLP8 95 aa9.59□□□□□ -0.87
NEDD4-212ENST00000557845 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
NEDD4-212ENST00000557845 ZNF73O43830 326 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-212ENST00000557845 JOSD1Q15040 202 aaPredicted RBP9.58□□□□□ -0.88
NEDD4-212ENST00000557845 Q8NBF4 154 aa9.58□□□□□ -0.88
NEDD4-212ENST00000557845 SPANXCQ9NY87 97 aa9.58□□□□□ -0.88
NEDD4-212ENST00000557845 CBY1Q9Y3M2 126 aa9.56□□□□□ -0.88
NEDD4-212ENST00000557845 IGLV7-46A0A075B6I9 117 aa9.55□□□□□ -0.88
NEDD4-212ENST00000557845 OR13C6PQ8NH95 151 aa9.55□□□□□ -0.88
NEDD4-212ENST00000557845 C20orf202A1L168 122 aa9.54□□□□□ -0.88
NEDD4-212ENST00000557845 HINT1P49773 126 aaPredicted RBP9.54□□□□□ -0.88
NEDD4-212ENST00000557845 IGLV9-49A0A0B4J1Y8 123 aa9.53□□□□□ -0.88
NEDD4-212ENST00000557845 TPRXLQ17RH7 258 aa9.53□□□□□ -0.88
NEDD4-212ENST00000557845 SSBP3-AS1Q7Z2R9 100 aa9.53□□□□□ -0.88
NEDD4-212ENST00000557845 SPINK1P00995 79 aa9.52□□□□□ -0.89
NEDD4-212ENST00000557845 MOBPQ13875 183 aa9.52□□□□□ -0.89
NEDD4-212ENST00000557845 ANKRD39Q53RE8 183 aa9.52□□□□□ -0.89
NEDD4-212ENST00000557845 LINC00518Q8N0U6 118 aa9.52□□□□□ -0.89
NEDD4-212ENST00000557845 SCGB1D4Q6XE38 83 aa9.51□□□□□ -0.89
NEDD4-212ENST00000557845 ATOH7Q8N100 152 aa9.51□□□□□ -0.89
NEDD4-212ENST00000557845 SPANXDQ9BXN6 97 aa9.51□□□□□ -0.89
NEDD4-212ENST00000557845 MUC2Q02817 5179 aa9.51□□□□□ -0.89
NEDD4-212ENST00000557845 C5orf52A6NGY3 159 aa9.5□□□□□ -0.89
NEDD4-212ENST00000557845 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
NEDD4-212ENST00000557845 CDIP1Q9H305 208 aa9.5□□□□□ -0.89
NEDD4-212ENST00000557845 AKR1D1P51857 326 aa9.49□□□□□ -0.89
NEDD4-212ENST00000557845 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
NEDD4-212ENST00000557845 IFITM1P13164 125 aa9.46□□□□□ -0.9
NEDD4-212ENST00000557845 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
NEDD4-212ENST00000557845 PCP2Q8IVA1 136 aa9.46□□□□□ -0.9
NEDD4-212ENST00000557845 DHRS4-AS1Q9P1J3 65 aa9.46□□□□□ -0.9
NEDD4-212ENST00000557845 RPS29P62273 56 aaKnown RBP9.45□□□□□ -0.9
NEDD4-212ENST00000557845 C6orf99Q4VX62 202 aa9.45□□□□□ -0.9
NEDD4-212ENST00000557845 Q6ZVH6 145 aa9.45□□□□□ -0.9
NEDD4-212ENST00000557845 COPS9Q8WXC6 57 aa9.45□□□□□ -0.9
NEDD4-212ENST00000557845 S100A1P23297 94 aa9.44□□□□□ -0.9
NEDD4-212ENST00000557845 COX7BP24311 80 aa9.44□□□□□ -0.9
NEDD4-212ENST00000557845 SNRPEP62304 92 aaKnown RBP9.44□□□□□ -0.9
NEDD4-212ENST00000557845 C9orf153Q5TBE3 101 aa9.44□□□□□ -0.9
NEDD4-212ENST00000557845 MUSTN1Q8IVN3 82 aa9.44□□□□□ -0.9
NEDD4-212ENST00000557845 HIST3H2BBQ8N257 126 aa9.44□□□□□ -0.9
NEDD4-212ENST00000557845 SPRR1BP22528 89 aa9.43□□□□□ -0.9
NEDD4-212ENST00000557845 ELOF1P60002 83 aaKnown RBP9.43□□□□□ -0.9
NEDD4-212ENST00000557845 MUC17Q685J3 4493 aa9.43□□□□□ -0.9
NEDD4-212ENST00000557845 S100A2P29034 98 aa9.42□□□□□ -0.9
NEDD4-212ENST00000557845 Q8N377 158 aa9.42□□□□□ -0.9
NEDD4-212ENST00000557845 HIST1H2BLQ99880 126 aa9.42□□□□□ -0.9
NEDD4-212ENST00000557845 TRBV7-6A0A0J9YX20 115 aa9.4□□□□□ -0.9
NEDD4-212ENST00000557845 A6NDN8 102 aa9.4□□□□□ -0.9
NEDD4-212ENST00000557845 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.9
NEDD4-212ENST00000557845 SLC25A20O43772 301 aa9.39□□□□□ -0.91
NEDD4-212ENST00000557845 KRTAP13-3Q3SY46 172 aa9.39□□□□□ -0.91
NEDD4-212ENST00000557845 A0A0U1RQV1 116 aa9.37□□□□□ -0.91
NEDD4-212ENST00000557845 S100A6P06703 90 aa9.37□□□□□ -0.91
NEDD4-212ENST00000557845 TAL2Q16559 108 aa9.37□□□□□ -0.91
NEDD4-212ENST00000557845 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
NEDD4-212ENST00000557845 A0A1B0GWB2 263 aa9.36□□□□□ -0.91
NEDD4-212ENST00000557845 DEFB105AQ8NG35 78 aa9.36□□□□□ -0.91
NEDD4-212ENST00000557845 TRAV13-2A0A0B4J235 113 aa9.35□□□□□ -0.91
NEDD4-212ENST00000557845 HSBP1L1C9JCN9 74 aa9.35□□□□□ -0.91
NEDD4-212ENST00000557845 TEX49A0A1B0GTD5 131 aa9.34□□□□□ -0.91
NEDD4-212ENST00000557845 A4D1N5 150 aa9.32□□□□□ -0.92
NEDD4-212ENST00000557845 Q1RN00 199 aa9.32□□□□□ -0.92
NEDD4-212ENST00000557845 HRCT1Q6UXD1 115 aa9.32□□□□□ -0.92
NEDD4-212ENST00000557845 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
NEDD4-212ENST00000557845 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
NEDD4-212ENST00000557845 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
NEDD4-212ENST00000557845 IGLV5-48A0A075B6I7 105 aa9.29□□□□□ -0.92
NEDD4-212ENST00000557845 PRO1933Q9H354 126 aa9.29□□□□□ -0.92
NEDD4-212ENST00000557845 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
NEDD4-212ENST00000557845 LIMD2Q9BT23 127 aa9.28□□□□□ -0.92
NEDD4-212ENST00000557845 FAT4Q6V0I7 4981 aa9.28□□□□□ -0.92
NEDD4-212ENST00000557845 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
NEDD4-212ENST00000557845 NHP2Q9NX24 153 aaKnown RBP9.27□□□□□ -0.93
NEDD4-212ENST00000557845 CD164Q04900 197 aa9.26□□□□□ -0.93
NEDD4-212ENST00000557845 VAMP3Q15836 100 aa9.26□□□□□ -0.93
NEDD4-212ENST00000557845 SEC61BP60468 96 aaKnown RBP9.23□□□□□ -0.93
NEDD4-212ENST00000557845 H7C2G1 150 aa9.22□□□□□ -0.93
NEDD4-212ENST00000557845 COX8AP10176 69 aa9.22□□□□□ -0.93
NEDD4-212ENST00000557845 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
NEDD4-212ENST00000557845 A0A0G2JQZ4 141 aa9.21□□□□□ -0.94
NEDD4-212ENST00000557845 XP32Q5T750 250 aa9.21□□□□□ -0.94
NEDD4-212ENST00000557845 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
NEDD4-212ENST00000557845 HIST1H4GQ99525 98 aa9.21□□□□□ -0.94
NEDD4-212ENST00000557845 DLEU1O43261 78 aa9.19□□□□□ -0.94
NEDD4-212ENST00000557845 Q5XG85 94 aa9.19□□□□□ -0.94
NEDD4-212ENST00000557845 hADV29S1A0JD25 119 aa9.18□□□□□ -0.94
NEDD4-212ENST00000557845 C12orf57Q99622 126 aa9.18□□□□□ -0.94
NEDD4-212ENST00000557845 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
NEDD4-212ENST00000557845 Q6ZQY7 126 aa9.16□□□□□ -0.94
NEDD4-212ENST00000557845 C14orf144Q96I85 54 aa9.16□□□□□ -0.94
NEDD4-212ENST00000557845 BVES-AS1Q5T3Y7 98 aa9.14□□□□□ -0.95
NEDD4-212ENST00000557845 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms