RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 MUC2Q02817 5179 aa12.63□□□□□ -0.39
CRNDE-203ENST00000557792 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
CRNDE-203ENST00000557792 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
CRNDE-203ENST00000557792 ERC2-IT1O76042 136 aa12.6□□□□□ -0.39
CRNDE-203ENST00000557792 PPDPFQ9H3Y8 114 aa12.6□□□□□ -0.39
CRNDE-203ENST00000557792 TRAV23DV6A0A075B6W5 121 aa12.59□□□□□ -0.39
CRNDE-203ENST00000557792 Q9BRP9 147 aa12.59□□□□□ -0.39
CRNDE-203ENST00000557792 SPANXCQ9NY87 97 aa12.59□□□□□ -0.39
CRNDE-203ENST00000557792 Q6ZRX8 168 aa12.58□□□□□ -0.4
CRNDE-203ENST00000557792 ZNF73O43830 326 aaPredicted RBP12.56□□□□□ -0.4
CRNDE-203ENST00000557792 HIST3H2BBQ8N257 126 aa12.56□□□□□ -0.4
CRNDE-203ENST00000557792 LINC00483Q53H64 154 aa12.55□□□□□ -0.4
CRNDE-203ENST00000557792 GAGE2AQ6NT46 116 aa12.55□□□□□ -0.4
CRNDE-203ENST00000557792 SCGB1D4Q6XE38 83 aa12.54□□□□□ -0.4
CRNDE-203ENST00000557792 OR13C6PQ8NH95 151 aa12.54□□□□□ -0.4
CRNDE-203ENST00000557792 HIST1H2BLQ99880 126 aa12.54□□□□□ -0.4
CRNDE-203ENST00000557792 AKR1D1P51857 326 aa12.53□□□□□ -0.4
CRNDE-203ENST00000557792 PCP2Q8IVA1 136 aa12.53□□□□□ -0.4
CRNDE-203ENST00000557792 CTAG1AP78358 180 aa12.52□□□□□ -0.41
CRNDE-203ENST00000557792 RETNLBQ9BQ08 111 aa12.52□□□□□ -0.41
CRNDE-203ENST00000557792 S100A2P29034 98 aa12.51□□□□□ -0.41
CRNDE-203ENST00000557792 JOSD1Q15040 202 aaPredicted RBP12.51□□□□□ -0.41
CRNDE-203ENST00000557792 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
CRNDE-203ENST00000557792 CBY1Q9Y3M2 126 aa12.51□□□□□ -0.41
CRNDE-203ENST00000557792 SPAG11AQ6PDA7 123 aa12.49□□□□□ -0.41
CRNDE-203ENST00000557792 LINC00518Q8N0U6 118 aa12.49□□□□□ -0.41
CRNDE-203ENST00000557792 A0A0U1RQV1 116 aa12.48□□□□□ -0.41
CRNDE-203ENST00000557792 HINT1P49773 126 aaPredicted RBP12.48□□□□□ -0.41
CRNDE-203ENST00000557792 Q8NBF4 154 aa12.48□□□□□ -0.41
CRNDE-203ENST00000557792 SNRPEP62304 92 aaKnown RBP12.47□□□□□ -0.41
CRNDE-203ENST00000557792 S100A6P06703 90 aa12.46□□□□□ -0.41
CRNDE-203ENST00000557792 IFITM1P13164 125 aa12.45□□□□□ -0.42
CRNDE-203ENST00000557792 C4orf48Q5BLP8 95 aa12.45□□□□□ -0.42
CRNDE-203ENST00000557792 ST20-AS1Q8NBB2 130 aa12.45□□□□□ -0.42
CRNDE-203ENST00000557792 IGLV9-49A0A0B4J1Y8 123 aa12.44□□□□□ -0.42
CRNDE-203ENST00000557792 Q6ZVH6 145 aa12.44□□□□□ -0.42
CRNDE-203ENST00000557792 MUSTN1Q8IVN3 82 aa12.44□□□□□ -0.42
CRNDE-203ENST00000557792 COPS9Q8WXC6 57 aa12.43□□□□□ -0.42
CRNDE-203ENST00000557792 MOBPQ13875 183 aa12.42□□□□□ -0.42
CRNDE-203ENST00000557792 C6orf99Q4VX62 202 aa12.41□□□□□ -0.42
CRNDE-203ENST00000557792 SSBP3-AS1Q7Z2R9 100 aa12.41□□□□□ -0.42
CRNDE-203ENST00000557792 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
CRNDE-203ENST00000557792 IGLV7-46A0A075B6I9 117 aa12.39□□□□□ -0.43
CRNDE-203ENST00000557792 DHRS4-AS1Q9P1J3 65 aa12.39□□□□□ -0.43
CRNDE-203ENST00000557792 HSBP1L1C9JCN9 74 aa12.38□□□□□ -0.43
CRNDE-203ENST00000557792 SPINK1P00995 79 aa12.38□□□□□ -0.43
CRNDE-203ENST00000557792 COX7BP24311 80 aa12.38□□□□□ -0.43
CRNDE-203ENST00000557792 ELOF1P60002 83 aaKnown RBP12.38□□□□□ -0.43
CRNDE-203ENST00000557792 A6NDN8 102 aa12.37□□□□□ -0.43
CRNDE-203ENST00000557792 KRTAP9-2Q9BYQ4 174 aa12.35□□□□□ -0.43
CRNDE-203ENST00000557792 FAT4Q6V0I7 4981 aa12.34□□□□□ -0.43
CRNDE-203ENST00000557792 LCE2AQ5TA79 106 aaPredicted RBP12.34□□□□□ -0.43
CRNDE-203ENST00000557792 TRBV7-6A0A0J9YX20 115 aa12.33□□□□□ -0.44
CRNDE-203ENST00000557792 SCGB1D1O95968 90 aa12.33□□□□□ -0.44
CRNDE-203ENST00000557792 SPRR1BP22528 89 aa12.33□□□□□ -0.44
CRNDE-203ENST00000557792 TPRXLQ17RH7 258 aa12.33□□□□□ -0.44
CRNDE-203ENST00000557792 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
CRNDE-203ENST00000557792 TRAV13-2A0A0B4J235 113 aa12.3□□□□□ -0.44
CRNDE-203ENST00000557792 MUC17Q685J3 4493 aa12.3□□□□□ -0.44
CRNDE-203ENST00000557792 FP248Q71RG6 208 aaPredicted RBP12.29□□□□□ -0.44
CRNDE-203ENST00000557792 CDIP1Q9H305 208 aa12.29□□□□□ -0.44
CRNDE-203ENST00000557792 A0A1B0GWB2 263 aa12.28□□□□□ -0.44
CRNDE-203ENST00000557792 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
CRNDE-203ENST00000557792 DEFB105AQ8NG35 78 aa12.27□□□□□ -0.45
CRNDE-203ENST00000557792 SMIM11BQ8TCY0 68 aa12.27□□□□□ -0.45
CRNDE-203ENST00000557792 TAL2Q16559 108 aa12.26□□□□□ -0.45
CRNDE-203ENST00000557792 SLC25A34Q6PIV7 304 aa12.26□□□□□ -0.45
CRNDE-203ENST00000557792 Q8N377 158 aa12.26□□□□□ -0.45
CRNDE-203ENST00000557792 A4D1N5 150 aa12.25□□□□□ -0.45
CRNDE-203ENST00000557792 LAMTOR3Q9UHA4 124 aa12.25□□□□□ -0.45
CRNDE-203ENST00000557792 TEX49A0A1B0GTD5 131 aa12.22□□□□□ -0.45
CRNDE-203ENST00000557792 COX8AP10176 69 aa12.22□□□□□ -0.45
CRNDE-203ENST00000557792 SLC25A20O43772 301 aa12.21□□□□□ -0.45
CRNDE-203ENST00000557792 Q1RN00 199 aa12.21□□□□□ -0.45
CRNDE-203ENST00000557792 LINC01547P58512 204 aaPredicted RBP12.2□□□□□ -0.46
CRNDE-203ENST00000557792 KRTAP13-3Q3SY46 172 aa12.19□□□□□ -0.46
CRNDE-203ENST00000557792 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
CRNDE-203ENST00000557792 IGLV5-48A0A075B6I7 105 aa12.18□□□□□ -0.46
CRNDE-203ENST00000557792 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
CRNDE-203ENST00000557792 DLEU1O43261 78 aa12.17□□□□□ -0.46
CRNDE-203ENST00000557792 HRCT1Q6UXD1 115 aa12.17□□□□□ -0.46
CRNDE-203ENST00000557792 C14orf144Q96I85 54 aa12.16□□□□□ -0.46
CRNDE-203ENST00000557792 VAMP3Q15836 100 aa12.15□□□□□ -0.46
CRNDE-203ENST00000557792 NHP2Q9NX24 153 aaKnown RBP12.15□□□□□ -0.46
CRNDE-203ENST00000557792 C12orf57Q99622 126 aa12.14□□□□□ -0.47
CRNDE-203ENST00000557792 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
CRNDE-203ENST00000557792 LINC00575Q6W349 94 aa12.13□□□□□ -0.47
CRNDE-203ENST00000557792 SPATA45Q537H7 98 aa12.12□□□□□ -0.47
CRNDE-203ENST00000557792 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
CRNDE-203ENST00000557792 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
CRNDE-203ENST00000557792 A0A0G2JQZ4 141 aa12.08□□□□□ -0.48
CRNDE-203ENST00000557792 CD164Q04900 197 aa12.08□□□□□ -0.48
CRNDE-203ENST00000557792 LIMD2Q9BT23 127 aa12.08□□□□□ -0.48
CRNDE-203ENST00000557792 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
CRNDE-203ENST00000557792 hADV29S1A0JD25 119 aa12.07□□□□□ -0.48
CRNDE-203ENST00000557792 H7C2G1 150 aa12.05□□□□□ -0.48
CRNDE-203ENST00000557792 CFC1BP0CG36 223 aa12.05□□□□□ -0.48
CRNDE-203ENST00000557792 CFC1P0CG37 223 aa12.05□□□□□ -0.48
CRNDE-203ENST00000557792 C2orf91Q6ZV80 131 aa12.05□□□□□ -0.48
CRNDE-203ENST00000557792 KRTAP9-6A0A140TA67 174 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms