RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 SPRR1AP35321 89 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 LRP2P98164 4655 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 PRR4Q16378 134 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
LINC00648-204ENST00000557749 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 LINC00304Q8N9R0 145 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 DDTP30046 118 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 S100A7L2Q5SY68 101 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 Q8NDZ9 215 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 PMCHL2Q9BQD1 86 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
LINC00648-204ENST00000557749 C20orf202A1L168 122 aa6.7□□□□□ -1.34
LINC00648-204ENST00000557749 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
LINC00648-204ENST00000557749 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-204ENST00000557749 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
LINC00648-204ENST00000557749 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
LINC00648-204ENST00000557749 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
LINC00648-204ENST00000557749 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 TIMM17BO60830 172 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 TSPAN13O95857 204 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
LINC00648-204ENST00000557749 DAND5Q8N907 189 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
LINC00648-204ENST00000557749 ANAPC11Q9NYG5 84 aa6.67□□□□□ -1.34
LINC00648-204ENST00000557749 TRAV23DV6A0A075B6W5 121 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 C5orf52A6NGY3 159 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
LINC00648-204ENST00000557749 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 Q6ZRX8 168 aa6.65□□□□□ -1.34
LINC00648-204ENST00000557749 SMCR5Q8TEV8 140 aa6.65□□□□□ -1.34
LINC00648-204ENST00000557749 ZNF815PA8K554 130 aa6.64□□□□□ -1.35
LINC00648-204ENST00000557749 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
LINC00648-204ENST00000557749 ZNF73O43830 326 aaPredicted RBP6.63□□□□□ -1.35
LINC00648-204ENST00000557749 C3orf79P0CE67 100 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 KRTDAPP60985 99 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 SNRPEP62304 92 aaKnown RBP6.63□□□□□ -1.35
LINC00648-204ENST00000557749 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 SPINK1P00995 79 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 SLC25A34Q6PIV7 304 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 Q6ZVH6 145 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 ADAMTSL4-AS1Q5T5F5 129 aa6.61□□□□□ -1.35
LINC00648-204ENST00000557749 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
LINC00648-204ENST00000557749 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
LINC00648-204ENST00000557749 A0A0U1RQV1 116 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 NPC2P61916 151 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
LINC00648-204ENST00000557749 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 SSBP3-AS1Q7Z2R9 100 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 DHRS4-AS1Q9P1J3 65 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 IFITM1P13164 125 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 S100A1P23297 94 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 Q8NBF4 154 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 LITAFQ99732 161 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
LINC00648-204ENST00000557749 S100A2P29034 98 aa6.58□□□□□ -1.36
LINC00648-204ENST00000557749 Q9BRP9 147 aa6.57□□□□□ -1.36
LINC00648-204ENST00000557749 RNF213Q63HN8 5207 aa6.57□□□□□ -1.36
LINC00648-204ENST00000557749 HSBP1L1C9JCN9 74 aa6.56□□□□□ -1.36
LINC00648-204ENST00000557749 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 S100A6P06703 90 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 MOBPQ13875 183 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 LPAP08519 4548 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 A4D1N5 150 aa6.54□□□□□ -1.36
LINC00648-204ENST00000557749 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
LINC00648-204ENST00000557749 C9orf153Q5TBE3 101 aa6.54□□□□□ -1.36
LINC00648-204ENST00000557749 SLC25A20O43772 301 aa6.53□□□□□ -1.36
LINC00648-204ENST00000557749 COX7BP24311 80 aa6.53□□□□□ -1.36
LINC00648-204ENST00000557749 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
LINC00648-204ENST00000557749 NHP2Q9NX24 153 aaKnown RBP6.53□□□□□ -1.36
LINC00648-204ENST00000557749 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 SPRR1BP22528 89 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 LAMTOR3Q9UHA4 124 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
LINC00648-204ENST00000557749 A6NDN8 102 aa6.5□□□□□ -1.37
LINC00648-204ENST00000557749 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
LINC00648-204ENST00000557749 HIST3H2BBQ8N257 126 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms