RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PRYO14603 147 aa5.05□□□□□ -1.6
PSEN1-223ENST00000557511 TIMM17BO60830 172 aa5.05□□□□□ -1.6
PSEN1-223ENST00000557511 RPL13AP40429 203 aaKnown RBP5.05□□□□□ -1.6
PSEN1-223ENST00000557511 SPANXB1Q9NS25 103 aaPredicted RBP5.05□□□□□ -1.6
PSEN1-223ENST00000557511 FAT3Q8TDW7 4589 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 HERC1Q15751 4861 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 LOC107984156A0A0G2JMH3 177 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 TRBV10-2A0A0K0K1G8 114 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 TMEM238C9JI98 176 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 NDUFC2O95298 119 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 DDTP30046 118 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 NPC2P61916 151 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 ARL17AQ8IVW1 177 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 ATOH7Q8N100 152 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 HIST1H2BLQ99880 126 aa5.04□□□□□ -1.6
PSEN1-223ENST00000557511 SCGB1D1O95968 90 aa5.03□□□□□ -1.6
PSEN1-223ENST00000557511 HINT1P49773 126 aaPredicted RBP5.03□□□□□ -1.6
PSEN1-223ENST00000557511 PRLHP81277 87 aa5.03□□□□□ -1.6
PSEN1-223ENST00000557511 HIGD2AQ9BW72 106 aa5.03□□□□□ -1.6
PSEN1-223ENST00000557511 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
PSEN1-223ENST00000557511 PKHD1L1Q86WI1 4243 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 TRBV10-3A0A0K0K1G6 114 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 MT1HL1P0DM35 61 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 PRR26Q8N8Z3 221 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 Q8NDZ9 215 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 OR13C6PQ8NH95 151 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 LINC00308Q8TCZ7 52 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 KCNQ1DNQ9H478 68 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 SPANXCQ9NY87 97 aa5.02□□□□□ -1.61
PSEN1-223ENST00000557511 ZNF706Q9Y5V0 76 aaPredicted RBP5.02□□□□□ -1.61
PSEN1-223ENST00000557511 CRYGAP11844 174 aa5.01□□□□□ -1.61
PSEN1-223ENST00000557511 KRTAP10-8P60410 259 aa5.01□□□□□ -1.61
PSEN1-223ENST00000557511 JOSD1Q15040 202 aaPredicted RBP5.01□□□□□ -1.61
PSEN1-223ENST00000557511 ADAMTSL4-AS1Q5T5F5 129 aa5.01□□□□□ -1.61
PSEN1-223ENST00000557511 Q6ZVH6 145 aa5.01□□□□□ -1.61
PSEN1-223ENST00000557511 LINC00518Q8N0U6 118 aa5.01□□□□□ -1.61
PSEN1-223ENST00000557511 LINC00337Q8N6G1 96 aa5.01□□□□□ -1.61
PSEN1-223ENST00000557511 IFITM1P13164 125 aa5□□□□□ -1.61
PSEN1-223ENST00000557511 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
PSEN1-223ENST00000557511 TRAV23DV6A0A075B6W5 121 aa4.99□□□□□ -1.61
PSEN1-223ENST00000557511 C5orf52A6NGY3 159 aa4.99□□□□□ -1.61
PSEN1-223ENST00000557511 KRTAP13-1Q8IUC0 172 aa4.99□□□□□ -1.61
PSEN1-223ENST00000557511 TYMSOSQ8TAI1 123 aa4.99□□□□□ -1.61
PSEN1-223ENST00000557511 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
PSEN1-223ENST00000557511 TRIAP1O43715 76 aa4.98□□□□□ -1.61
PSEN1-223ENST00000557511 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
PSEN1-223ENST00000557511 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
PSEN1-223ENST00000557511 SOSTDC1Q6X4U4 206 aa4.98□□□□□ -1.61
PSEN1-223ENST00000557511 LITAFQ99732 161 aa4.98□□□□□ -1.61
PSEN1-223ENST00000557511 ZNF73O43830 326 aaPredicted RBP4.97□□□□□ -1.61
PSEN1-223ENST00000557511 IGLV6-57P01721 117 aa4.97□□□□□ -1.61
PSEN1-223ENST00000557511 SPRR1AP35321 89 aa4.97□□□□□ -1.61
PSEN1-223ENST00000557511 PCP2Q8IVA1 136 aa4.97□□□□□ -1.61
PSEN1-223ENST00000557511 SMCR5Q8TEV8 140 aa4.97□□□□□ -1.61
PSEN1-223ENST00000557511 A6NDN8 102 aa4.96□□□□□ -1.62
PSEN1-223ENST00000557511 MUSTN1Q8IVN3 82 aa4.96□□□□□ -1.62
PSEN1-223ENST00000557511 PPDPFQ9H3Y8 114 aa4.96□□□□□ -1.62
PSEN1-223ENST00000557511 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
PSEN1-223ENST00000557511 Q6ZRX8 168 aa4.95□□□□□ -1.62
PSEN1-223ENST00000557511 ANAPC11Q9NYG5 84 aa4.95□□□□□ -1.62
PSEN1-223ENST00000557511 SPRR4Q96PI1 79 aa4.94□□□□□ -1.62
PSEN1-223ENST00000557511 VAMP8Q9BV40 100 aa4.94□□□□□ -1.62
PSEN1-223ENST00000557511 HMCN2Q8NDA2 5059 aa4.93□□□□□ -1.62
PSEN1-223ENST00000557511 A0A087X002 238 aa4.93□□□□□ -1.62
PSEN1-223ENST00000557511 KRTAP4-16G5E9R7 235 aaPredicted RBP4.93□□□□□ -1.62
PSEN1-223ENST00000557511 COX7BP24311 80 aa4.93□□□□□ -1.62
PSEN1-223ENST00000557511 GAGE2AQ6NT46 116 aa4.93□□□□□ -1.62
PSEN1-223ENST00000557511 HIST1H4GQ99525 98 aa4.93□□□□□ -1.62
PSEN1-223ENST00000557511 DHRS4-AS1Q9P1J3 65 aa4.93□□□□□ -1.62
PSEN1-223ENST00000557511 COX8AP10176 69 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 VAMP3Q15836 100 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 C6orf99Q4VX62 202 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 SPATA45Q537H7 98 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 SLC25A34Q6PIV7 304 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 PAM16Q9Y3D7 125 aa4.92□□□□□ -1.62
PSEN1-223ENST00000557511 TSPAN13O95857 204 aa4.91□□□□□ -1.62
PSEN1-223ENST00000557511 NHP2Q9NX24 153 aaKnown RBP4.91□□□□□ -1.62
PSEN1-223ENST00000557511 A0A1B0GWB2 263 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 A4D1N5 150 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 DLEU1O43261 78 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 SLC25A20O43772 301 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 PRR4Q16378 134 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
PSEN1-223ENST00000557511 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 TRBV7-6A0A0J9YX20 115 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 ERC2-IT1O76042 136 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 ELOF1P60002 83 aaKnown RBP4.89□□□□□ -1.63
PSEN1-223ENST00000557511 CTAG1AP78358 180 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 TAL2Q16559 108 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 C14orf144Q96I85 54 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 Q9BRP9 147 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 TNXBP22105 4242 aa4.89□□□□□ -1.63
PSEN1-223ENST00000557511 LOC105371267A0A1B0GV96 52 aa4.88□□□□□ -1.63
PSEN1-223ENST00000557511 SNCGO76070 127 aa4.88□□□□□ -1.63
PSEN1-223ENST00000557511 LINC00483Q53H64 154 aa4.88□□□□□ -1.63
PSEN1-223ENST00000557511 C9orf153Q5TBE3 101 aa4.88□□□□□ -1.63
PSEN1-223ENST00000557511 C3orf22Q8N5N4 141 aa4.88□□□□□ -1.63
PSEN1-223ENST00000557511 LAMTOR3Q9UHA4 124 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms