RNA–Protein interactions for RNA: ENST00000557295.1

LINC00640-204, long intergenic non-protein coding RNA 640, humanhuman

TSL 5 BASIC

Gene LINC00640, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-204ENST00000557295 IGLV4-69A0A075B6H9 119 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 MYMXA0A1B0GTQ4 84 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 CCL25O15444 150 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 HERVK_113P61574 105 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 SYCNQ0VAF6 134 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
LINC00640-204ENST00000557295 VCX2Q9H322 139 aa3.95□□□□□ -1.78
LINC00640-204ENST00000557295 UBE2L6O14933 153 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 TSPAN13O95857 204 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 SMIM13P0DJ93 91 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 TPRXLQ17RH7 258 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 GTF2H5Q6ZYL4 71 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 PHF5AQ7RTV0 110 aaKnown RBP3.94□□□□□ -1.78
LINC00640-204ENST00000557295 CEND1Q8N111 149 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 LINC00526Q96FQ7 95 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 AMELXQ99217 191 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 SPANXA1Q9NS26 97 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 TP73-AS1Q9UF72 201 aa3.94□□□□□ -1.78
LINC00640-204ENST00000557295 IGKV3OR2-268A0A0C4DH90 116 aa3.93□□□□□ -1.78
LINC00640-204ENST00000557295 MRPS36P82909 103 aaKnown RBP3.93□□□□□ -1.78
LINC00640-204ENST00000557295 SMAGPQ0VAQ4 97 aa3.93□□□□□ -1.78
LINC00640-204ENST00000557295 VAMP3Q15836 100 aa3.93□□□□□ -1.78
LINC00640-204ENST00000557295 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
LINC00640-204ENST00000557295 SPANXB1Q9NS25 103 aaPredicted RBP3.93□□□□□ -1.78
LINC00640-204ENST00000557295 A0A1W2PPM0 123 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 LEPROTO15243 131 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 APOMO95445 188 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 FXYD2P54710 66 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 RPL39P62891 51 aaKnown RBP3.92□□□□□ -1.78
LINC00640-204ENST00000557295 COTL1Q14019 142 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 KRTAP11-1Q8IUC1 163 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 PLEKHB2Q96CS7 222 aa3.92□□□□□ -1.78
LINC00640-204ENST00000557295 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
LINC00640-204ENST00000557295 TINCRA0A1B0GVN0 87 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 TMEM223A0PJW6 202 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 K7EP34 96 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 FABP2P12104 132 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 XCL1P47992 114 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 AMMECR1LQ6DCA0 310 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 FAM104AQ969W3 186 aa3.91□□□□□ -1.78
LINC00640-204ENST00000557295 LINC00959A0A1B0GUT2 108 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 ZNF815PA8K554 130 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 J3QQQ9 107 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 ZNF22P17026 224 aaPredicted RBP3.9□□□□□ -1.79
LINC00640-204ENST00000557295 Q6ZVH6 145 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 HIST1H4GQ99525 98 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 TTTY13Q9BZ97 58 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.79
LINC00640-204ENST00000557295 H3BUT2 72 aa3.89□□□□□ -1.79
LINC00640-204ENST00000557295 CRYGAP11844 174 aa3.89□□□□□ -1.79
LINC00640-204ENST00000557295 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
LINC00640-204ENST00000557295 SCGB1D4Q6XE38 83 aa3.89□□□□□ -1.79
LINC00640-204ENST00000557295 A0A0J9YXY3 114 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 K7ERU9 68 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 TIMM17BO60830 172 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
LINC00640-204ENST00000557295 RPL18AQ02543 176 aaKnown RBP3.88□□□□□ -1.79
LINC00640-204ENST00000557295 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 LYRM7Q5U5X0 104 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 CAMK2N2Q96S95 79 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 RETNLBQ9BQ08 111 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 NHP2Q9NX24 153 aaKnown RBP3.88□□□□□ -1.79
LINC00640-204ENST00000557295 SPCS1Q9Y6A9 102 aa3.88□□□□□ -1.79
LINC00640-204ENST00000557295 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
LINC00640-204ENST00000557295 IGKV2-29A2NJV5 120 aaPredicted RBP3.87□□□□□ -1.79
LINC00640-204ENST00000557295 TMEM238C9JI98 176 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 F8W1H4 67 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 ZNF861PO60384 105 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 TSPEAR-AS2P59090 65 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 HERVK_113P63121 156 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 SS18Q15532 418 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 ASB16-AS1Q495Z4 193 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
LINC00640-204ENST00000557295 TRBV20-1A0A075B6N2 111 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 A0A0B4J2C4 111 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 COX7A2LO14548 114 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 IFITM1P13164 125 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 OCIAD2Q56VL3 154 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 RAB37Q96AX2 223 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 TMEM101Q96IK0 257 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 CBY1Q9Y3M2 126 aa3.86□□□□□ -1.79
LINC00640-204ENST00000557295 M0QXV9 152 aa3.85□□□□□ -1.79
LINC00640-204ENST00000557295 TLX1NBP0CAT3 122 aa3.85□□□□□ -1.79
LINC00640-204ENST00000557295 C9orf129Q5T035 196 aaKnown RBP3.85□□□□□ -1.79
LINC00640-204ENST00000557295 Q6ZUT4 128 aa3.85□□□□□ -1.79
LINC00640-204ENST00000557295 COPS9Q8WXC6 57 aa3.85□□□□□ -1.79
LINC00640-204ENST00000557295 KRTAP4-1Q9BYQ7 146 aa3.85□□□□□ -1.79
LINC00640-204ENST00000557295 CDC42SE2Q9NRR3 84 aa3.85□□□□□ -1.79
LINC00640-204ENST00000557295 K7ERJ3 54 aa3.84□□□□□ -1.79
LINC00640-204ENST00000557295 NDUFA1O15239 70 aa3.84□□□□□ -1.79
LINC00640-204ENST00000557295 UBE2BP63146 152 aa3.84□□□□□ -1.79
LINC00640-204ENST00000557295 FAM19A5Q7Z5A7 132 aaPredicted RBP3.84□□□□□ -1.79
LINC00640-204ENST00000557295 GEMIN7Q9H840 131 aaKnown RBP3.84□□□□□ -1.79
LINC00640-204ENST00000557295 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.79
LINC00640-204ENST00000557295 NDUFA12Q9UI09 145 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms