RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 H7C2G1 150 aa6.47□□□□□ -1.37
PSEN1-221ENST00000557293 MT2AP02795 61 aa6.47□□□□□ -1.37
PSEN1-221ENST00000557293 C18orf32Q8TCD1 76 aa6.47□□□□□ -1.37
PSEN1-221ENST00000557293 LINC00587B1AMM8 73 aa6.46□□□□□ -1.38
PSEN1-221ENST00000557293 ZNF73O43830 326 aaPredicted RBP6.46□□□□□ -1.38
PSEN1-221ENST00000557293 C10orf91Q5T1B1 145 aa6.46□□□□□ -1.38
PSEN1-221ENST00000557293 SPANXB1Q9NS25 103 aaPredicted RBP6.46□□□□□ -1.38
PSEN1-221ENST00000557293 TRAV23DV6A0A075B6W5 121 aa6.45□□□□□ -1.38
PSEN1-221ENST00000557293 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-221ENST00000557293 MAP1LC3CQ9BXW4 147 aa6.45□□□□□ -1.38
PSEN1-221ENST00000557293 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
PSEN1-221ENST00000557293 RPS10P5Q9NQ39 176 aa6.45□□□□□ -1.38
PSEN1-221ENST00000557293 TRAV12-1A0A0B4J245 112 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 NDUFC2O95298 119 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 TSPEAR-AS2P59090 65 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 S100A7L2Q5SY68 101 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 SMIM29Q86T20 159 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 LAMTOR3Q9UHA4 124 aa6.44□□□□□ -1.38
PSEN1-221ENST00000557293 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
PSEN1-221ENST00000557293 A0A0G2JQZ4 141 aa6.43□□□□□ -1.38
PSEN1-221ENST00000557293 UQCC3Q6UW78 93 aa6.43□□□□□ -1.38
PSEN1-221ENST00000557293 SOSTDC1Q6X4U4 206 aa6.43□□□□□ -1.38
PSEN1-221ENST00000557293 S100A1P23297 94 aa6.42□□□□□ -1.38
PSEN1-221ENST00000557293 COX19Q49B96 90 aa6.42□□□□□ -1.38
PSEN1-221ENST00000557293 SLC25A34Q6PIV7 304 aa6.42□□□□□ -1.38
PSEN1-221ENST00000557293 SEC11CQ9BY50 192 aa6.42□□□□□ -1.38
PSEN1-221ENST00000557293 PRO1933Q9H354 126 aa6.42□□□□□ -1.38
PSEN1-221ENST00000557293 TMEM218A2RU14 115 aa6.41□□□□□ -1.38
PSEN1-221ENST00000557293 MT1FP04733 61 aa6.41□□□□□ -1.38
PSEN1-221ENST00000557293 SYNE2Q8WXH0 6885 aaKnown RBP6.41□□□□□ -1.38
PSEN1-221ENST00000557293 Q1RN00 199 aa6.4□□□□□ -1.38
PSEN1-221ENST00000557293 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
PSEN1-221ENST00000557293 LEPROTO15243 131 aa6.38□□□□□ -1.39
PSEN1-221ENST00000557293 S100PP25815 95 aa6.38□□□□□ -1.39
PSEN1-221ENST00000557293 AKR1D1P51857 326 aa6.38□□□□□ -1.39
PSEN1-221ENST00000557293 DHRS4-AS1Q9P1J3 65 aa6.38□□□□□ -1.39
PSEN1-221ENST00000557293 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
PSEN1-221ENST00000557293 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
PSEN1-221ENST00000557293 C20orf202A1L168 122 aa6.35□□□□□ -1.39
PSEN1-221ENST00000557293 HINT1P49773 126 aaPredicted RBP6.35□□□□□ -1.39
PSEN1-221ENST00000557293 NPC2P61916 151 aa6.35□□□□□ -1.39
PSEN1-221ENST00000557293 TAL2Q16559 108 aa6.35□□□□□ -1.39
PSEN1-221ENST00000557293 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
PSEN1-221ENST00000557293 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
PSEN1-221ENST00000557293 TRAPPC1Q9Y5R8 145 aa6.35□□□□□ -1.39
PSEN1-221ENST00000557293 TEX49A0A1B0GTD5 131 aa6.34□□□□□ -1.39
PSEN1-221ENST00000557293 J3QQQ9 107 aa6.34□□□□□ -1.39
PSEN1-221ENST00000557293 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
PSEN1-221ENST00000557293 ATP11AUNQ6ZP68 121 aa6.34□□□□□ -1.39
PSEN1-221ENST00000557293 Q75L30 129 aa6.34□□□□□ -1.39
PSEN1-221ENST00000557293 ELOF1P60002 83 aaKnown RBP6.32□□□□□ -1.4
PSEN1-221ENST00000557293 YPEL4Q96NS1 127 aa6.32□□□□□ -1.4
PSEN1-221ENST00000557293 APOC3P02656 99 aa6.31□□□□□ -1.4
PSEN1-221ENST00000557293 SMCPP49901 116 aaPredicted RBP6.31□□□□□ -1.4
PSEN1-221ENST00000557293 KRTAP10-10P60014 251 aa6.31□□□□□ -1.4
PSEN1-221ENST00000557293 RHEBQ15382 184 aa6.31□□□□□ -1.4
PSEN1-221ENST00000557293 COX7BP24311 80 aa6.3□□□□□ -1.4
PSEN1-221ENST00000557293 NMUP48645 174 aa6.3□□□□□ -1.4
PSEN1-221ENST00000557293 CBY1Q9Y3M2 126 aa6.3□□□□□ -1.4
PSEN1-221ENST00000557293 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
PSEN1-221ENST00000557293 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
PSEN1-221ENST00000557293 SVBPQ8N300 66 aa6.29□□□□□ -1.4
PSEN1-221ENST00000557293 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
PSEN1-221ENST00000557293 CHCHD1Q96BP2 118 aaKnown RBP6.29□□□□□ -1.4
PSEN1-221ENST00000557293 OBSCN-AS1Q96MR7 158 aa6.29□□□□□ -1.4
PSEN1-221ENST00000557293 TCL1BO95988 128 aa6.28□□□□□ -1.4
PSEN1-221ENST00000557293 C6orf99Q4VX62 202 aa6.28□□□□□ -1.4
PSEN1-221ENST00000557293 PCP2Q8IVA1 136 aa6.27□□□□□ -1.41
PSEN1-221ENST00000557293 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
PSEN1-221ENST00000557293 LITAFQ99732 161 aa6.27□□□□□ -1.41
PSEN1-221ENST00000557293 SNAPINO95295 136 aa6.26□□□□□ -1.41
PSEN1-221ENST00000557293 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
PSEN1-221ENST00000557293 H0Y8G0 127 aa6.25□□□□□ -1.41
PSEN1-221ENST00000557293 LGALS3P17931 250 aaKnown RBP6.25□□□□□ -1.41
PSEN1-221ENST00000557293 SPANXDQ9BXN6 97 aa6.25□□□□□ -1.41
PSEN1-221ENST00000557293 COLCA2A8K830 154 aa6.24□□□□□ -1.41
PSEN1-221ENST00000557293 LINC00846Q9NV44 126 aa6.24□□□□□ -1.41
PSEN1-221ENST00000557293 TRBV7-6A0A0J9YX20 115 aa6.23□□□□□ -1.41
PSEN1-221ENST00000557293 PMCHL2Q9BQD1 86 aa6.23□□□□□ -1.41
PSEN1-221ENST00000557293 PLNP26678 52 aa6.22□□□□□ -1.41
PSEN1-221ENST00000557293 C20orf166-AS1Q96NR2 134 aa6.22□□□□□ -1.41
PSEN1-221ENST00000557293 TRBV20-1A0A075B6N2 111 aa6.21□□□□□ -1.42
PSEN1-221ENST00000557293 A8MUU9 505 aa6.21□□□□□ -1.42
PSEN1-221ENST00000557293 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
PSEN1-221ENST00000557293 DPM2O94777 84 aa6.21□□□□□ -1.42
PSEN1-221ENST00000557293 HERVK_113P61574 105 aa6.21□□□□□ -1.42
PSEN1-221ENST00000557293 Q96NJ1 140 aa6.21□□□□□ -1.42
PSEN1-221ENST00000557293 LINC00310P59036 64 aa6.2□□□□□ -1.42
PSEN1-221ENST00000557293 HSBP1O75506 76 aa6.19□□□□□ -1.42
PSEN1-221ENST00000557293 IGKCP01834 107 aa6.19□□□□□ -1.42
PSEN1-221ENST00000557293 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
PSEN1-221ENST00000557293 TRBV7-7A0A0K0K1E9 115 aa6.18□□□□□ -1.42
PSEN1-221ENST00000557293 A0A1B0GWB2 263 aa6.18□□□□□ -1.42
PSEN1-221ENST00000557293 E9PLD3 99 aa6.18□□□□□ -1.42
PSEN1-221ENST00000557293 LEPROTL1O95214 131 aa6.18□□□□□ -1.42
PSEN1-221ENST00000557293 LINC00518Q8N0U6 118 aa6.18□□□□□ -1.42
PSEN1-221ENST00000557293 TIMM17BO60830 172 aa6.17□□□□□ -1.42
PSEN1-221ENST00000557293 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
PSEN1-221ENST00000557293 HRES1P13985 223 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms